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2020-05-12New patch release SLEPc 3.13.2 (#16601)Jose E. Roman1-0/+1
2020-05-12py-horovod: link dependency for py-torch (#16600)Andrew W Elble1-1/+1
fix for same reasons as #16495.
2020-05-12caffe: fixed build error (#16520)Toyohisa Kameyama7-1/+362
* opencv 3.2 requires cmake 3.11 or older. caffe dependency is changed. * revert opencv variant to caffe. backport to opencv errors.
2020-05-12py-dask: new version (#16531)Sergey Kosukhin3-24/+122
* py-dask: new version * py-dask: update the constraints. * py-dask: add a list of maintainers.
2020-05-12gcc: fix several issues (#16599)Michael Kuhn2-18/+40
- GCC has moved to Git - The develop/master version requires flex - Add myself as a maintainer - Set the library path in the zstd patch
2020-05-12z3: update python dependency (#16597)Todd Gamblin1-1/+2
-[x] `z3` needs a dependency on `py-setuptools` -[x] `z3` has a run dependency on `python`, so we might as well make building with the python bindings default
2020-05-12prokka: new package at v1.14.6 (#16282)Justin S1-0/+31
2020-05-12clingo: update package (#16594)Todd Gamblin1-7/+29
`clingo` has some undocumented dependencies: - `bison`, for which the default macos version is too old - `re2c`, which isn't always available Also, the python installation was not set up properly. Clingo by default does an install in `~/.local`, so we need to disable that and add a few other options to get things right. - [x] add `bison` dependency - [x] add `re2c` dependency - [x] make `doxygen` dependency optional (and patch if needed) - [x] add options to fix `python` build - [x] make python build optional but on by default
2020-05-12xabclib: added support for Fujitsu compiler. (#16596)Tomoki, Karatsu1-0/+4
- Added Fujitsu compiler options that have the same functions as the options added for GCC - Added option to link C objects
2020-05-11Charm++: fix build prefix; add ucx/pmi support (#15666)Sajid Ali2-42/+124
* Add pmi support (required by ucx, ofi, and gni backends) * Add support for ucx backend * Add dependency on MPI for pmi=simplepmi, slurmpmi, or slurmpmi2 * Remove charmpp as an MPI provider since the changes in this PR can add MPI as a dependency (mentioned previously) * Install into transport_protocol-OS-arch subdirectory to match default charmpp installation behavior (which helps dependents find it)
2020-05-11python: add -fwrapv to cflags for python@3.8.0: %intel (#16592)Greg Becker1-0/+9
2020-05-11fio: Add 3.19 (#16571)Michael Kuhn1-0/+4
Earlier versions are not compatible with gcc@10:.
2020-05-11adios: Fix build with gcc@10: (#16569)Michael Kuhn1-0/+5
2020-05-11Add avizo version 2020.1 (#16567)asmaahassan901-2/+8
2020-05-11py-plac: remove erroneous argparse dependency (#16584)Adam J. Stewart1-1/+1
2020-05-11mpich: Fix build with gcc@10: (#16568)Michael Kuhn1-0/+4
2020-05-11r-rstudioapi : new version (#16574)Amjad Kotobi1-0/+1
2020-05-11r-rlang : new version (#16575)Amjad Kotobi1-0/+1
2020-05-11r-digest : version updated (#16578)Amjad Kotobi1-0/+1
2020-05-11Map the spack skylake arch to Kokkos BDW, rather than SKX (#16583)Andrew Gaspar1-1/+6
SKX includes AVX-512 extensions that consumer Skylake processors do not have. Therefore, map Skylake to the prior arch to work on these systems. Skylake-X processors will still map as the skylake_avx512 spack arch and get the correct optimzations.
2020-05-11stata: add new libpng dependency (#16582)Justin S1-2/+2
2020-05-11netcdf-fortran: Fix build with gcc@10: (#16573)Michael Kuhn1-0/+5
2020-05-11New package: py-mmcv (#16536)Jen Herting1-0/+24
* [py-mmcv] Created template * [py-mmcv] added description and homepage * [py-mmcv] requires python 3.6+ * [py-mmcv] added dependencies * [py-mmcv] depends on opencv * [py-mmcv] cleaned up fixmes * [py-mmcv] requires numpy >= 1.11.1
2020-05-11gcc: added v10.1.0 (#16525)Michael Kuhn2-3/+37
2020-05-11py-configobj: remove url function (#16522)Sinan1-10/+0
It seems the pypi version of the package somehow compiles just fine Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
2020-05-11py-jupyterlab: added package at v2.1.0 (#16562)takanori-ihara1-0/+30
2020-05-10Add new package:py-jupyterlab-server (#16561)takanori-ihara1-0/+25
2020-05-10PyTorch: fix master and mkldnn builds (#16560)Adam J. Stewart1-3/+4
2020-05-10new version r-rcpp (#16549)Amjad Kotobi1-0/+1
2020-05-10new version r-glue (#16558)Amjad Kotobi1-0/+1
2020-05-10new version r-pkgbuild (#16559)Amjad Kotobi1-0/+1
2020-05-10new version r-jsonlite (#16557)Amjad Kotobi1-0/+1
2020-05-10new version r-dt (#16555)Amjad Kotobi1-0/+1
2020-05-10new version r-covr (#16554)Amjad Kotobi1-0/+1
2020-05-10new version r-callr (#16552)Amjad Kotobi1-0/+1
2020-05-10DGL: add new version (#16547)Adam J. Stewart1-3/+10
2020-05-09[dd4hep] variant and run env updates (#16524)vvolkl1-2/+8
* [dd4hep] variant and run env updates * address comments from #16524
2020-05-09Add maintainers and variants for building with default earlier api versions. ↵Larry Knox1-0/+12
(#16534) * Add maintainers. Add variants for building with default earlier api versions. * Update var/spack/repos/builtin/packages/hdf5/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-09New package: py-addict (#16535)Jen Herting1-0/+19
* [py-addict] created template * [py-addict] added homepage and description * [py-addict] cleaned up fixmes * [py-addict] depends on py-setuptools
2020-05-09QMCPACK Update May 2020 (#16542)Nichols A. Romero1-23/+2
* Add naromero77 as a maintainer for QMCPACK Spack package. * Add QMCPACK 3.9.2 * Remove QE-to-QMCPACK wave function converter from QMCPACK Spack package. Already been moved to QE Spack package.
2020-05-09Fix dependency of geant4 (amends #16497) (#16504)iarspider3-10/+14
* Fix dependency of geant4 (amends #16497) * Update geant4-data dependencies * Reviewer comments (part 1/2) * Reviewer comments (part 2/2) * Update var/spack/repos/builtin/packages/geant4-data/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-05-09update visit package with 3.1.1 release and add comments (#16498)Cyrus Harrison3-7/+154
2020-05-08spaCy: add new package for en_core_web_sm model (#16539)Adam J. Stewart1-0/+17
2020-05-08Metall: add version 0.2 (#16502)Keita Iwabuchi1-0/+2
2020-05-08Add new package:py-pytest-check-links (#16503)takanori-ihara1-0/+19
2020-05-08py-netcdf4: a couple of improvements (#16505)Sergey Kosukhin2-0/+30
* py-netcdf4: avoid recompilation and make the older versions to work with HDF5@1.10: * py-netcdf4: add a new version and introduce a maintainer list.
2020-05-08precice: Fix conflict with boost 1.73.0 (#16507)Frédéric Simonis1-0/+1
2020-05-08graphviz: fix cairo backend (#16511)Christoph Junghans1-1/+1
2020-05-08Gaudi: separate variant for building documentation (#16515)iarspider1-2/+4
* Gaudi: separate variant for building documentation * Update package.py
2020-05-08New package (#16519)h-denpo1-0/+26
Large Scale Assembly, Structural Correspondence, Multi Dynamics Simulator.In this program, a part of functions of ADVENTURE_Solid ver.1.1 module
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