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The YAML config for paths and modules of external packages has
changed: the new format allows a single spec to load multiple
modules. Spack will automatically convert from the old format
when reading the configs (the updates do not add new essential
properties, so this change in Spack is backwards-compatible).
With this update, Spack cannot modify existing configs/environments
without updating them (e.g. “spack config add” will fail if the
configuration is in a format that predates this PR). The user is
prompted to do this explicitly and commands are provided. All
config scopes can be updated at once. Each environment must be
updated one at a time.
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* git: new version 2.28
* git: man page version 2.28
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* Since LLVM already depends on the CUDA build system, these lines are redundant.
* This conflict doesn't do anything.
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Next version of FFTW won't use `-no-gcc` so add a patch to backport the fix to older versions.
Fixes #17810.
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* KNEM url updated
Signed-off-by: Alex Margolin <alex.margolin@huawei.com>
* Allow UCX to be built against KNEM and XPMEM
Signed-off-by: Alex Margolin <alex.margolin@huawei.com>
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Older versions do not compile correctly. New users should use 2.004,
not any of the older versions.
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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undefined reference to '__muloti4', using the proposed fix from
https://bugs.llvm.org/show_bug.cgi?id=16404
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FlatCC has been removed from UnifyFS as a dependency on the develop
branch and for future releases.
spath is now an optional dependency for UnifyFS to normalize relative
paths provided by the user.
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* [whizard] bug fix for ~openloops
* [lcio] new version
* [gaudi] new version
* [lcio] add delphes dependency for examples
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Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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The tcl module for r-dorng will fail to load due to the [] characters in
the description. This happens for Tcl formatted modules loaded by Lmod
at least.
```
module load r-dorng-1.7.1-gcc-9.2.0-wtq7bne
Lmod has detected the following error: .../spack/share/spack/modules/linux-centos7-broadwell/r-dorng-1.7.1-gcc-9.2.0-wtq7bne:(r-dorng-1.7.1-gcc-9.2.0-wtq7bne):
invalid command name "L'Ecuyer"
```
Split text for short and long descriptions.
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Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
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Mbedtls 2.16.x uses target_sources() from cmake >= 3.1.0
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Signed-off-by: Daniel Topa <dantopa@gmail.com>
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* Add variants to petsc
This PR adds the follolwing variants to the petsc package
- gmp
- jpeg
- libpng
- giflib
- mpfr
- netcdf
- pnetcdf (parallel-netcdf)
- moab
- eigen
- random123
- exodusii
- mstk
- cgns
- memkind
- muparser
- p4est
- saws
- libyaml
- zstd
* Fix flake8 errors
* Additional changes to Petsc recipe
This commit addresses the issues with dependencies that were brought up
in the comments. There are also a few other enhancements.
- the language of the new variant descriptions was changed to be more
consistent with what was already in the recipe
- an explicit '+mpi' was added to the depends_on('hypre...') directives
- an explicit '+mpi' was added to the depends_on('trilinos...')
directives
- the run time error checking for '~mpi' was replaced with 'conflicts()'
directives that will cause the install to fail sooner
- additional variants that were 'parallel only' were added to the '~mpi'
check
* Set the '~mpi`' conflicts msg to a variable
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* new package: py_cmake
* sync cmake and py-cmake versions
* new package: py_cmake
* sync cmake and py-cmake versions
* flake8, improve dependency specifics
* replace template stuff with actual values
Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
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* Changing raja, chai, and umpire packages so all will compile with each other.
* Need a CUDA version of CHAI when compiling with raja+cuda+chai
* Updating checks for commit.
* Adding comments explaining why chai+umpire tests were disabled
* Reactivating tests for CHAI and Umpire
* reordering versions
* Unified handling of Cuda Arch
* Adding latest versions
* Unused/Untested: removed
* Aesthetic and test mode in Chai
* Unified handling of Cuda Arch
* Using 'ON' consistently, instead of 'On'
* Apply suggestions from code review
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Fix, suggestion and patch:
Chai depends on RAJA, not the other way.
Apply suggested master-main version mapping.
Add Umpire version 3.0.0 and patch.
Co-authored-by: Robert Blake <blake14@llnl.gov>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* New package - REDItools
This PR adds the REDItools package, along with a new package dependency,
py-fisher. This contains a patch generated from the python 2to3 script
as well as some other fixes. I am not sure if the project is ready to
support python-3 yet but I submitted the other patches upstream.
* Update var/spack/repos/builtin/packages/reditools/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* new version 2020.3; new variants nosuffix and fft; version selections for plumed
* fixed too long lines
* fixed whitespaces
* revised fft interface according to @haampie 's suggestions
Co-authored-by: lu64bag3 <gerald.mathias@lrz.de>
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Added spackage for profugusMC
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* isescan: new package at 1.7.2.1
* isescan: update external program paths
* isescan: use spack compiler
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