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2017-12-08Update openfast package to explicity pass MPI implementation during cmake ↵Jon Rood1-0/+3
configure. (#6590)
2017-12-07wxWidgets: Fix builds (#6560)Axel Huebl2-1/+15
- depends on GTK+ with X enabled (btw, non-X backends are deprecated/removed in GTK+) - patch for 3.0.1-3.0.2: missing include caused multiple `error: call of overloaded ‘abs(XYPOSITION)’ is ambiguous` (seen in GCC 6.3.0); fixed in 3.0.3+
2017-12-06r-pathview: Create new package. (#6582)lingnanyuan1-0/+51
2017-12-06r-kegggraph: Create new package. (#6580)lingnanyuan1-0/+43
2017-12-06r-org-hs-eg-db: Create new package. (#6581)lingnanyuan1-0/+38
2017-12-06Package 'libszip': update checksum and list_depth. (#6587)Sergey Kosukhin1-2/+2
2017-12-06picard: Add version 2.16.0 (#6579)Eric1-0/+1
2017-12-06mrbayes: url now points to github + removed the deprecated sourceforge url ↵Audrey Thoma1-4/+3
(#6578)
2017-12-05Update CGNS and add CGNS capability to Trilinos (#6568)Jon Rood2-18/+55
* Update CGNS to be able to be used in Trilinos. * Updating Trilinos to be able to use CGNS. * Fixing wrong cmake defines in trilinos for enabling cgns and cleaning up cgns package. * Changing cgns parallel variant to mpi. Removing explicit dependence on parallel-netcdf in trilinos.
2017-12-05Update gnupg to 2.2.3 (#6573)nshtg4-4/+8
Updated dependencies: * libassuan 2.4.5 * libgcrypt 1.8.1 * npth 1.5
2017-12-05Add Maintainer (#6575)Axel Huebl14-0/+14
Add myself as maintainer to the packages we contributed and/or maintain the mainline from.
2017-12-05Add opennurbs package (#6570)Jon Rood1-0/+75
* Adding OpenNurbs package. * Fixing flake8 error. * Removing unused os import from opennurbs.
2017-12-05ADIOS 1.13.0: LZ4 & blosc support (#6572)Axel Huebl1-1/+16
Add additional transform libraries to ADIOS. Also modifies existing transforms to the versions they were introduced (otherwise this was resulting in unknown configure flags).
2017-12-05ADIOS 1.13.0: Newer SZ Versions (#6561)Axel Huebl1-1/+2
The latest release of ADIOS needs a newer version of SZ due to an upstream library naming change.
2017-12-05c-blosc: 1.12.1 (#6571)Axel Huebl1-0/+9
Adds a newer release of c-blosc, adds the new flags for external library builds, adds missing dependencies.
2017-12-04OpenJPEG: all version tuples have the same length. (#6526)Sergey Kosukhin1-4/+23
2017-12-04Added package r version 3.4.3 (#6565)Paschalis Korosoglou1-1/+2
2017-12-04libpng: CPPFLAGS for -I (#6563)Axel Huebl1-1/+1
Recent versions of `libpng` (e.g. 1.6.34) warn/abort that includes for `zlib` need to be passed properly via `CPPFLAGS`. This fixes it.
2017-12-04bamtools: Add version 2.5.0 (#6553)Eric1-0/+1
2017-12-04dealii: add scalapack and various cleanups (#6552)Denis Davydov3-72/+81
2017-12-04py-h5py: fixed a typo in the name of a dependency (#6540)Chien-Chang Feng1-1/+1
2017-12-03 Adding zlib dependence to xrootd to resolve #6545 (#6550)Benedikt Riedel1-0/+1
2017-12-03py-multiqc: Add version 1.3 (#6554)Eric1-0/+1
2017-12-03r-fftwtools: new package (#6532)Yifan Zhu1-0/+43
2017-12-03Rename variant static to shared (#6543)Paschalis Korosoglou1-2/+2
2017-12-03gcc: remove all variant (#5283)Denis Davydov1-5/+9
2017-12-02Add Kvasir MPL (#6529)Nils Deppe1-0/+38
2017-12-02salmon: Add version 0.9.1 (#6516)Eric1-0/+2
2017-12-01Paraview expects qt to have opengl (#6520)sknigh1-1/+2
2017-12-01ADIOS: 1.13.0 (#6539)Axel Huebl1-0/+1
New release of ADIOS: 1.13.0.
2017-12-01Add new package py-libensemble (#6525)Stephen Hudson1-0/+45
2017-12-01py-dendropy: Create new package (#6528)Eric1-0/+42
2017-12-01Added variant static for hwloc (#6538)Paschalis Korosoglou1-0/+2
2017-12-01r-udunits2: new package r-udunits2 (#6533)Yifan Zhu1-0/+37
2017-12-01r-units: new package (#6531)Yifan Zhu1-0/+42
2017-11-30Fix CGAL checksum and switch to more stable URL (#6511)Adam J. Stewart1-5/+6
2017-11-30add package py-lazy-object-proxy (#6489)healther1-0/+38
2017-11-30r-biomformat: Create new package. (#6517)lingnanyuan1-0/+48
2017-11-30r-phyloseq: Create new package. (#6518)lingnanyuan1-0/+53
2017-11-30r-nanotime: new package (#6519)Yifan Zhu1-0/+41
2017-11-30Flit package (#6260)Michael Bentley2-0/+93
Add initial build support for version 2.0-alpha.1
2017-11-29Add new package nlopt (#6499)Stephen Hudson1-0/+80
2017-11-28add missing build dependency to py-pytest-runner (#6490)healther1-0/+1
2017-11-28Update globus package version and hash (#6482)Yan Grange1-2/+2
2017-11-28libmongoc: Fix pkg-config file not containing snappy and zlib paths (#6467)Michael Kuhn1-0/+12
2017-11-28remove breaking version and cleanup of dependencies (#6494)healther1-9/+13
2017-11-28add conflicts to py-enum34 (#6496)healther1-0/+1
2017-11-28Fix astroid dependency and mark broken version (#6493)healther1-3/+8
2017-11-28add package py-editdistance (#6492)healther1-0/+36
2017-11-28add package py-isort (#6491)healther1-0/+36