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2019-05-14gmap-gsnap: add 2019-05-12 (#11453)Justin S1-0/+1
2019-05-14r-rstantools: new package at 1.5.1 (#11451)Justin S1-0/+16
2019-05-14r-caroline: new package at 0.7.6 (#11450)Justin S1-0/+19
2019-05-14r-stanheaders: add 2.18.1 (#11446)Justin S1-0/+1
2019-05-14r-withr: add 2.1.2 (#11445)Justin S1-0/+1
2019-05-14repeatmasker: add 4.0.9, refactor interactive config (#11385)Justin S1-10/+23
2019-05-15PNetCDF package: enable option required by NetCDF (#11420)Jon Rood1-0/+3
The --enable-relax-coord-bound option was added in 1.8.0. NetCDF 4.6.3 enabled relax coords by default and required it from PNetCDF. PNetCDF 1.10.0 enabled it by default but for versions between 1.8.0 and 1.10.0 it should be enabled explicitly.
2019-05-15CUDA package: exclude compat libs (#11449)Peter Scheibel1-0/+21
CUDA 10.0 provides Compatability libraries for running newer versions of CUDA with older drivers. These do not work with newer drivers.
2019-05-14megadock: new package at 4.0.3 (#10537)Justin S1-0/+77
* megadock: new package at 4.0.3 * megadock: remove CudaPackage redundancies * megadock: move env vars to build targets, use cuda_arch variant * megadock: flake8 fixes, more flexible mathlib
2019-05-15Fix py-yt for Python 2 by requesting older py-ipython version (#11416)Jon Rood2-0/+3
* Fix py-yt for Python 2 by requesting older py-ipython version. * Add conflicts statement to py-ipython because version 7: is not compatible with python@2.7
2019-05-15New Package: NTPoly (#11412)william-dawson1-0/+29
2019-05-14Add new versions of metaphysicl and change masa to use branch instead of ↵Jon Rood2-2/+4
tag. (#11436)
2019-05-14r-bh: add 1.69.0-1 (#11435)Justin S1-0/+2
2019-05-14rename py-pauvr to py-pauvre (#11437)Levi Baber1-2/+2
* rename py-pauvr to py-pauvre
2019-05-14m4 package: fix OS version check (#11290)George Zagaris1-1/+1
f242f5f removed spec.architecture.platform_os, which was used to test an option in the 'm4' package. The attribute is now accessed as 'spec.architecture.os'.
2019-05-13Add master branch of leveldb (#11405)Adam J. Stewart1-0/+2
2019-05-11New package: py-pycares (starting at 3.0.0) (#11340)Shane R. Spencer1-0/+20
2019-05-10mesa: Add 19.0.4 (#11415)Chuck Atkins1-2/+4
2019-05-10LIBXSMM 1.12 (#11414)Hans Pabst1-1/+2
2019-05-10Add new version of PGI compiler. (#11417)Jon Rood1-0/+1
2019-05-11sqlite: add versions; restore old versions; variant resolves security ↵Chris Green3-4/+116
issues. (#11336) * Add versions 3.27.{0,1,2} and 3.28.0 * Add url_for_version: the URL format includes the year so this function maps version ranges to years * Restore patches for versions removed in 84c547c: this commit removed versions before 3.26.0 due to a security issue with FTS support. Add a +fts variant (default true) that enables FTS support along with a conflict for +fts with earlier versions.
2019-05-10paraview: Fix OpenGL search to ignore glvnd (#11400)Chuck Atkins1-0/+1
2019-05-10py-pauvr:new package (#11292)xfzhao1-0/+21
* py-pauvr:new package * py-pauvr: using url and Releases * py-pauvr: remove extra comments
2019-05-10update aom package licensePeter Josef Scheibel1-2/+10
2019-05-10update license date range for simgridPeter Josef Scheibel1-1/+1
2019-05-10dyninst: update cmake args and boost dependency (#11378)Mark W. Krentel1-8/+18
* Starting with the upcoming 10.1 release, Dyninst changed the names of some cmake args to camel case: LIBELF_* to LibElf_* and LIBDWARF_* to LibDwarf_*. This change is needed now for @develop and will be used for 10.1 when it is released. * New versions of Dyninst now requires cmake version 3.4.0 or later. * Restrict boost dependency version to < 1.70.0 to avoid build error
2019-05-09update to texlive 2019 (#11365)David Gardner1-2/+2
2019-05-10elpa: override headers prop for common include-dir localizationTiziano Müller4-19/+24
... and apply this in SIRIUS, CP2K & QE. Thanks to @scheibelp for the idea.
2019-05-10packages/cp2k: require libxsmm 1.11+Tiziano Müller1-1/+2
2019-05-10packages/cp2k: build with -ggdb with GNU for backtracesTiziano Müller1-1/+5
2019-05-10packages/cp2k: add support for siriusTiziano Müller1-1/+27
2019-05-10packages/json-fortran: initial commit, required by CP2K+siriusTiziano Müller1-0/+21
2019-05-10packages/sirius: initial commitTiziano Müller3-0/+145
2019-05-10packages/libvdwxc: initial commit, required for SIRIUSTiziano Müller1-0/+53
2019-05-09Clean up mercury package and add boostsys, shared variants (#11368)Jerome Soumagne1-76/+60
Use tarballs instead of git tags Fix openpa dependency on gcc < 4.9 Fix boost dependency Change sm variant default to true
2019-05-09nco: Add 4.7.9 (#11389)Michael Kuhn1-1/+4
Earlier versions do not compile with gcc@9.
2019-05-09netcdf: Fix build if curl is not installed (#11387)Michael Kuhn1-0/+14
For 4.7.0, configure fails if curl is not installed.
2019-05-09qt: Fix build with gcc@9 (#11391)Michael Kuhn1-0/+6
2019-05-09papi: Add 5.7.0 (#11390)Michael Kuhn1-1/+2
This also fixes the GCC patch to be applied for versions 8 and up.
2019-05-09gcc: Add 9.1.0 (#11386)Michael Kuhn1-0/+3
2019-05-09mesa: Add missing dependencies (#11394)Michael Kuhn1-0/+3
2019-05-08qt: sqlite needs to be a run dep because of the qt plugin infrastructure ↵Chuck Atkins1-1/+1
(#11399)
2019-05-08mesa: Add 19.0.{1,2,3} (#11401)Chuck Atkins1-4/+7
2019-05-08nut: fix nut build (#11393)Christoph Junghans1-1/+0
2019-05-08Provide a patched version of random123 that will work on ARM platforms (#11388)Kelly (KT) Thompson2-0/+14
+ The additional patch enables a non-optimized random123 code path that will work on ARM architectures. This solution is provided only for version 1.09 to allow the most current version of Random123 to function on ARM architectures. + A more complete, long term solution will be the addition of a native ARM intrinsics-based implementation of random123. This solution is being worked on but it is several weeks or months away. Once the full implementation is available it will be provided to the author/maintainer of Random123.
2019-05-08llvm: Adjust default supported targetsChuck Atkins1-5/+4
The default install for llvm should just be the common typical case, i.e. support for local host and cpu architectures. Enablingsupport for the wide array of auxiliary architectures should be explicit rather than implicit.
2019-05-07Add OpenBLAS 0.3.6 (#11375)Janne Blomqvist1-0/+1
Signed-off-by: Janne Blomqvist <janne.blomqvist@aalto.fi>
2019-05-07py-scikit-learn: needs setuptools (#11379)Levi Baber1-0/+1
2019-05-07hpcviewer: add version 2019.04 (#11380)Mark W. Krentel1-2/+11
2019-05-07ninja: drop python as a run dep (#11347)Chuck Atkins2-2/+6
* ninja: Make python a build-only dependency * ninja, ninja-fortran: allow the packages to provide eachother
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