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2022-05-16subversion: added apxs support (#30381)Francine Lapid1-0/+4
2022-05-16frontier-client: adapt pacparser_setmyip function to new pacparser release ↵haralmha1-0/+20
(#29936)
2022-05-16eccodes, fix jasper again (#30635)Harmen Stoppels3-11/+16
* eccodes: jasper@:2 * Revert "jasper: avoid --gc-sections / hidden symbols" This reverts commit d1bc0f39c516a7dc1e941aa4a804b7468a200b75. * bump ecbuild, drop cmake constraint for newer versions * add ecbuild dep to eccodes@develop
2022-05-16bpp-suite and deps: urls to GitHub (#30665)snehring6-8/+62
* bpp-core: moving url to github. Fixing compilation issue. * bpp-phyl: moving url to github. * bpp-seq: moving url to github * bpp-popgen: new package * bpp-suite: moving url to github, new version. * bpp-popgen: removing unused cmake_args.
2022-05-16screen: add v4.9.0, add required build deps (#30667)Alex Hedges1-0/+4
2022-05-16treesub: change jdk dependency to java, add build to java dep. type (#30672)dlkuehn1-1/+1
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-05-16clblast: add new package (#30677)Umar Arshad1-0/+51
2022-05-16nextflow: add v22.04.1 (#30679)Diego Alvarez1-3/+4
2022-05-16openjdk: add 11.0.15+10, 17.0.3+7 (#30680)Diego Alvarez1-2/+16
2022-05-15mpich: add support for Mellanox HCOLL (#30662)Ken Raffenetti1-0/+12
Co-authored-by: Federico Ficarelli <federico.ficarelli@pm.me>
2022-05-14qt: add 5.15.4 (#30656)Michael Kuhn1-0/+1
2022-05-14[py-pyworld] Limiting numpy version. See: ↵Jen Herting1-1/+1
https://zenn.dev/ymd_h/articles/934a90e1468a05 (#30670)
2022-05-13CEED v5.0 release (#29710)Cameron Smith8-18/+180
* ceed50: add ceed 5.0.0 and pumi 2.2.7 * libceed-0.10 * ceed50: add omegah * omega-h: mpi and cuda builds work * omega-h: fix style * New package: libfms * New version: gslib@1.0.7 CEED: add some TODO items for the 5.0 release * ceed: variant name consistent with package name * LAGHOS: allow newer versions of MFEM to be used with v3.1 * LIBCEED: add missing 'install' target in 'install_targets' * CEED: address some TODO items + some tweaks * MFEM: add new variant for FMS (libfms) * CEED: v5.0.0 depends on 'libfms' and 'mfem+fms' * RATEL: add missing 'install' target in 'install_targets' * CEED: add dependency for v5.0.0 on Ratel v0.1.2 * CEED: add Nek-related dependencies for ceed@5.0.0 * CEED: v5.0.0 depends on MAGMA v2.6.2 * libCEED: set the `CUDA_ARCH` makefile parameter * libCEED: set the `HIP_ARCH` makefile parameter Co-authored-by: Jed Brown <jed@jedbrown.org> Co-authored-by: Veselin Dobrev <dobrev@llnl.gov> Co-authored-by: Veselin Dobrev <v-dobrev@users.noreply.github.com>
2022-05-13New package: py-pyworld (#28641)Jen Herting1-0/+22
* espnet first build with depends * added cython>=0.24.0' and type='build' * [py-pyworld] updated copyright Co-authored-by: Sid Pendelberry <sid@rit.edu>
2022-05-13Ascent: Patch 0.8.0 for finding ADIOS2. (#30609)kwryankrattiger2-0/+102
2022-05-13concretizer: enable hash reuse with full hashTodd Gamblin5-0/+124
With the original DAG hash, we did not store build dependencies in the database, but with the full DAG hash, we do. Previously, we'd never tell the concretizer about build dependencies of things used by hash, because we never had them. Now, we have to avoid telling the concretizer about them, or they'll unnecessarily constrain build dependencies for new concretizations. - [x] Make database track all dependencies included in the `dag_hash` - [x] Modify spec_clauses so that build dependency information is optional and off by default. - [x] `spack diff` asks `spec_clauses` for build dependencies for completeness - [x] Modify `concretize.lp` so that reuse optimization doesn't affect fresh installations. - [x] Modify concretizer setup so that it does *not* prioritize installed versions over package versions. We don't need this with reuse, so they're low priority. - [x] Fix `test_installed_deps` for full hash and new concretizer (does not work for old concretizer with full hash -- leave this for later if we need it) - [x] Move `test_installed_deps` mock packages to `builtin.mock` for easier debugging with `spack -m`. - [x] Fix `test_reuse_installed_packages_when_package_def_changes` for full hash
2022-05-13Fix how environments are read from lockfileScott Wittenburg1-0/+1
2022-05-13sarus: fix dependency on boost (#30659)Teodor Nikolov1-1/+1
The program_options variant is disabled by default in Boost and has to be enabled explicitly.
2022-05-13libtree: add v3.0.4, v3.1.1 (#30658)Harmen Stoppels1-0/+2
2022-05-12silo: Cleanup the HDF5 dependency specs (#30593)Chuck Atkins1-4/+16
2022-05-12vtk: fix hdf5 version specification (#30592)Chuck Atkins1-2/+12
2022-05-12py-scikit-learn: add v1.1.0 (#30649)Adam J. Stewart1-2/+2
2022-05-12atompaw: add version 4.2.0.0 (#30650)Simon Pintarelli1-0/+1
2022-05-12Revert "atompaw: add new package (#30619)" (#30647)Massimiliano Culpo1-41/+0
This reverts commit 12b0278f08c5557c8c458fdbf4886c5f67aa40c9.
2022-05-12soapdenovo-trans: add v1.0.5 (#30629)snehring1-2/+5
2022-05-12code-server: add new versions (#30646)Max Zeyen1-8/+44
2022-05-12py-netcdf4: add v1.5.8 (#30598)Adam J. Stewart1-3/+13
2022-05-12precice: add v2.4.0 (#30633)Frédéric Simonis1-5/+17
2022-05-12fakexrandr: remove 'ldconfig' from Makefile (#30632)Qian Jianhua1-2/+2
2022-05-12Add patch for compiling llvm ~omp_as_runtime (#30583)Mikael Simberg2-0/+17
2022-05-12pigz: add v2.7 (#30640)Harmen Stoppels1-0/+1
2022-05-12platypus: limit install to Python2 (#30624)dlkuehn1-1/+1
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-05-12atompaw: add new package (#30619)Simon Pintarelli1-0/+41
2022-05-12cuda: add v11.7 (#30630)Eureka Hwang1-0/+4
2022-05-11quantum-espresso: add gipaw variant (#30628)marcosmazz1-0/+9
Co-authored-by: Marcos Mazzini - <mmazzini@serafin.ccad.unc.edu.ar>
2022-05-11This commit removes the Boost.with_default_variants to variants (#28960)Abhik Sarkar19-103/+24
that packages are precisely dependant upon. This is the second batch of 20 packages with modified boost dependencies.
2022-05-11add darshan-3.4.0-pre1 release (#30569)shanedsnyder2-2/+12
include new dependencies on autotools/m4/etc.
2022-05-11bamutil: updating to 1.0.15 (#30623)snehring1-8/+18
* bamutil: updating to 1.0.15 * bamutil: switching to github archive
2022-05-11lammps: updating googletest version to 1.11 to avoid ↵AMD Toolchain Support2-0/+19
GTEST_DISALLOW_ASSIGN_Error (#30563) * updating googletest version to 1.11 to avoid GTEST_DISALLOW_ASSIGN_ error * limiting the version scope * modified the version limit Co-authored-by: mohan babu <mohbabul@amd.com>
2022-05-11assimp: add v5.2.3 (#29629)Wouter Deconinck1-5/+1
2022-05-11sentieon-genomics: add version 202112.02, remove manual download (#30145)snehring1-10/+11
2022-05-11Add conflict for ROCm and asio in HPX package (#30620)Mikael Simberg1-0/+3
2022-05-11libEnsemble: add v0.9.1 (#30621)Stephen Hudson1-1/+2
2022-05-11rocfft: add spack build test support (#29957)Cory Bloor3-4/+43
* rocfft: add spack build test support * Style cleanup for variant specs
2022-05-11[acts] Add version 19 (#30615)Hadrien G1-0/+1
No build system visible changes, so AFAIK this should Just Work
2022-05-11ReFrame: add v3.11.0 (#30578)Vasileios Karakasis1-0/+2
2022-05-11eccodes: add v2.25.0 (#30618)Harmen Stoppels1-0/+1
2022-05-11jasper: avoid --gc-sections / hidden symbols (#30617)Harmen Stoppels1-0/+5
Jasper v3.x changed a default to hide hidden symbols, but apparently eccodes relies on those symbols and fails to link otherwise.
2022-05-11jasper: update cmake dependency (#30616)Harmen Stoppels1-1/+2
2022-05-11gobject-introspection: add libffi dependency (#30601)Gregory Lee1-0/+3
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