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2019-03-06added python 2.7.16 (#10805)Gregory Lee1-1/+2
2019-03-06build fixes for util-linux (#10811)Gregory Lee1-7/+2
2019-03-06unifycr: dependency changes and new version (#10722)Cameron Stanavige1-25/+13
New release of UnifyCR. Remove unsupported pre-1.0 versions UnifyCR has had a few dependency changes to make the backend more efficient. A new pre-release version has been released as well to mark these changes. Prior versions are no longer supported.
2019-03-06update package rsem (#10813)Owen Solberg1-0/+1
2019-03-06libusbmuxd: new package (#10726)Isaac Whitfield1-0/+30
2019-03-05intel-parallel-studio package: add version cluster.2019.2 (#10782)健美猞猁1-0/+1
2019-03-05New package: pal (#10766)健美猞猁1-0/+29
2019-03-05New package: erfa (#10763)健美猞猁1-0/+21
2019-03-05NetCDF package: add version 4.6.3 and update naming (#10786)Greg Sjaardema1-3/+11
* Add NetCDF version 4.6.3 * Naming scheme for artifacts >= 4.6.2 has changed. Add a url_for_version function to generate the appropriate URLs
2019-03-05Add fzf utility package (#10778)clellsolomon1-0/+32
* Add fzf utility package * Fix "style checks" errors - var/spack/repos/builtin/packages/fzf/package.py:32: [E226] missing whitespace around arithmetic operator
2019-03-05gcc package: Add 8.3.0 (#10772)Michael Kuhn1-0/+1
2019-03-05openss package: allow all 2.7.x versions (#10807)Gregory Lee1-1/+1
Originally the version constraint range had an upper bound of 2.7.15 This allows all 2.7.x versions
2019-03-05RegCM: intel FC 'hint', 4.7.0 intel warning, fcflags, fix extensions. (#10797)Alberto Chiusole1-14/+63
This should fix and improve #9934, which was messed up by a fetch from develop
2019-03-05various package version updates and build fixes (#10775)Gregory Lee9-6/+80
* various package version updates and build fixes
2019-03-05cantera: make sundials dependency optional (#10764)Matthias Diener1-12/+17
2019-03-05ncl: Add 6.6.2 (#10800)Michael Kuhn1-0/+1
2019-03-05openssl: Add 1.1.1b, 1.1.0j and 1.0.2r (#10779)Michael Kuhn1-1/+4
2019-03-05git-lfs: add version 2.7.1 (#10770)Matthias Diener1-1/+2
2019-03-05seacas: Update NetCDF version requirement (#10787)Greg Sjaardema1-2/+2
Modified NetCDF requirement to allow NetCDF-4.6.2 and subsequent versions.
2019-03-05libbeagle: add 3.1.2 (#10789)Justin Stanley1-6/+4
2019-03-04Header subdirectories for Python and Eigen (#10773)Peter Scheibel2-3/+11
Fixes #10769 This updates the .headers property to include header subdirectories for Python and Eigen (as is recommended by these packages). #10623 updated the default behavior of .headers.directories to exclude subdirectories (since this can cause clashes with system headers). This broke some packages which depended on the old behavior of .headers.directories: for example if you had <package-prefix>/include/subdir/ex1.h, .headers.directories would include <package-prefix>/include/subdir.
2019-03-01Package Updates for ECP CANDLE Supervisor (#10760)Brian Van Essen12-3/+175
* Add EQ-R package * Add Fansi, Pillar, UTF8 (R) packages * Add new versions for py-mdanalysis, r-cli, r-dplyr, r-pkgconfig, r-rlang, r-tibble, stc, and turbine packages * Add hdf5 support for turbine * Specify configure directory for stc package
2019-03-01blast2go: new package at 5.2.5 (#10725)Justin Stanley1-0/+47
* blast2go: new package at 5.2.5 * blast2go: remove redundant url
2019-03-01new package: intel-pin (#10546)Matthias Diener1-0/+23
2019-03-01r-bfastspatial: new package at 0.6.2 (#10734)Justin Stanley1-0/+28
2019-03-01r-bfast: new package at 1.5.7 (#10733)Justin Stanley1-0/+23
2019-03-01bedops: avoid static linking with glibc (#10456)Justin Stanley1-0/+5
2019-03-01blast-legacy: new package at 2.2.26 (#10610)Justin Stanley1-0/+35
* blast-legacy: new package at 2.2.26 * blast-legacy: compile from source * blast-legacy: add missing os.symlink import * blast-legacy: fix build script interpreter
2019-03-01bridger: new package at 2014-12-01 (#10611)Justin Stanley1-0/+31
2019-03-01r-spatial: new package at 7.3-11 (#10728)Justin Stanley1-0/+19
2019-03-01r-nortest: new package at 1.0-4 (#10729)Justin Stanley1-0/+18
2019-03-01r-xts: add 0.11-2 (#10730)Justin Stanley1-1/+2
2019-03-01r-gdalutils: new package at 2.0.1.14 (#10731)Justin Stanley1-0/+23
2019-03-01r-rgdal: add 1.3-9 (#10732)Justin Stanley1-1/+2
2019-03-01hyphy: new package at 2.3.14 (#10759)Justin Stanley1-0/+20
2019-03-01Fix sha256 sum for IOR (#10765)Jiawei Zhuang1-1/+1
2019-02-28petsc: add +knl variantSajid Ali1-1/+5
2019-02-28Trilinos: add release 12.14.1 (#10740)Satish Balay2-3/+3
xsdk: switch from 12.14.0-rc1 to 12.14.1
2019-02-28py-tetoolkit: Add version 2.0.3 (#10749)Eric Martin1-1/+3
2019-02-27git-lfs: patch Makefile for v2.7.0 (#10720)Owen Solberg2-0/+14
Fixes #10702 Same fix merged upstream in git-lfs/git-lfs#3545 -- it may appear in future release v2.7.2 according to package maintainer.
2019-02-27wtdbg2: new package (#10639)Justin Stanley1-0/+20
* wtdbg2: new package at 2.3 * wtdbg2: flake8 fix
2019-02-27mpich: Improve package (#10643)Michael Kuhn1-2/+39
- Add missing pkg-config, libpciaccess and libxml2 dependencies - Add slurm variant for nodelist parsing - Add missing configure flag for libfabric - Unset F90 and F90FLAGS - Allow selecting different PMI interfaces
2019-02-27otf2 package: fix download URL (#10735)Paschalis Korosoglou1-1/+1
2019-02-27Add newer versions for 51 Python packages (#10738)Gregory Lee51-4/+53
2019-02-27Update environment-modules package (#10717)Massimiliano Culpo1-31/+59
The environment modules package has been updated to include versions up to 4.0.0. The url of the package and the homepage have been updated accordingly. The `spack bootstrap` command now builds version 3.2.10 of the environment-modules package, and will do until #10708 is fixed.
2019-02-26new package: libusb (#10682)Isaac Whitfield1-0/+35
2019-02-26new package: libtasn1 (#10681)Isaac Whitfield1-0/+33
2019-02-26QMCPACK package: cuda/hdf5 fixes (#10701)Nichols A. Romero1-4/+8
* Make use of new QE multi-valued HDF5 variant interface * Remove explicit CUDA dependency (which is handled by inheriting from CudaPackage) * Update cuda_arch unset variant check
2019-02-26petsc: add version 3.10.4 (#10724)Satish Balay1-0/+1
2019-02-26new package: phred (#10700)Justin Stanley1-0/+21
Part of the software collection introduced in #10529. Developers must be contacted via email to receive the source code.