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2023-12-13perl-ipc-system-simple: New package (#41611)Arne Becker1-0/+28
2023-12-13perl-mime-types: New package (#41612)Arne Becker1-0/+26
2023-12-13perl-convert-nls-date-format: New package (#41613)Arne Becker1-0/+29
2023-12-13perl-module-pluggable: New package (#41614)Arne Becker1-0/+28
2023-12-13perl-email-date-format: New package (#41617)Arne Becker1-0/+28
2023-12-13perl-heap: New package (#41618)Arne Becker1-0/+26
2023-12-13perl-log-any: New package (#41619)Arne Becker1-0/+26
2023-12-13perl-http-cookiejar: New package (#41620)Arne Becker1-0/+32
2023-12-13Revert "[protobuf] New versions, explicit cxxstd variant (#41459)" (#41635)Harmen Stoppels1-32/+5
This reverts commit b82bd8e6b630e477396b9a51b56c66194fb52c9d.
2023-12-13mysql: add v8.0.35, fix build (#41602)Massimiliano Culpo1-10/+40
2023-12-13Add pic variant when building the library (#41631)Taillefumier Mathieu1-0/+6
* Add pic variant when building the library * make pretty * Probably better approach
2023-12-13hepmc3: fix from_variant -> self.define (#41605)Wouter Deconinck1-2/+2
* hepmc3: fix from_variant -> self.define * hepmc3: str on versions
2023-12-12perl-getopt-argvfile: add new package with version 1.11 (#41625)Christopher Christofi1-0/+15
2023-12-12perl-parselex: add new package with version 2.21 (#41626)Christopher Christofi1-0/+15
2023-12-12Remove MCT license annotation (#41593)Aiden Grossman1-3/+3
This license annotation is currently invalid as it specifies a URL rather than an SPDX expression. Remove it for now until we have a consensus on how to represent this case.
2023-12-12pastix: new release v6.3.2 (#41585)fpruvost1-1/+2
2023-12-12perl-clone-pp: New package (#41586)Arne Becker1-0/+28
2023-12-12kakoune: add v2023.08.05 (#41443)James Taliaferro1-0/+5
2023-12-12perl-ipc-run3: New package (#41583)Arne Becker1-0/+26
2023-12-12Update bioconductor packages (#41227)pabloaledo8-4/+135
Signed-off-by: Pablo <pablo.aledo@seqera.io>
2023-12-12New package Model Coupling Toolkit (MCT) (#41564)Dom Heinzeller1-0/+26
* New package Model Coupling Toolkit (MCT) * Remove ~mpi variant from mct, build is not working correctly * Remove boilerplate stuff from var/spack/repos/builtin/packages/mct/package.py
2023-12-12py-pyvista: add v0.42.3 (#41246)Adam J. Stewart1-1/+6
2023-12-12mysql: fix issue when using old core API call (#41573)Massimiliano Culpo1-1/+1
MySQL was performing a core API call to `Spec.flat_dependencies` when setting up the build environment. This function is an implementation detail of the old concretizer, where multiple nodes from the same package are not allowed. This PR uses a more idiomatic way to check if "python" is in the DAG. For reference, see #11356 to check why the call was introduced.
2023-12-12genfit: Add latest tags and update root dependency (#41572)Thomas Madlener1-7/+15
2023-12-12bowtie2 add latest version (#41580)James Beal1-0/+1
Co-authored-by: James Beal <jb23@sanger.ac.uk>
2023-12-12perl-type-tiny: New package (#41582)Arne Becker1-0/+29
2023-12-12gcc: simplify patch when range (#41587)Harmen Stoppels1-2/+2
2023-12-12NVIDIA HPC SDK: add v23.11 (#41125)jmuddnv1-0/+14
2023-12-12clingo-bootstrap: use new Spack API for environment modifications (#41574)Stephen Sachs1-2/+3
2023-12-12exago: Add v1.2.0 and patches for builds without python or tests. (#41350)Cameron Rutherford4-0/+104
Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2023-12-12fmt: Add patch to allow compilation with clang in CUDA mode (#41578)Mikael Simberg1-0/+7
2023-12-11[protobuf] New versions, explicit cxxstd variant (#41459)Chris Green1-5/+32
* [protobuf] New versions, explicit cxxstd variant * New versions 3.15.8, 3.25.0, 3.25.1. * New explicit variant `cxxstd` with support for older Protobuf versions. * Support testing. * Use Protobuf's `protobuf_BUILD_SHARED_LIBS` instead of `BUILD_SHARED_LIBS`. * Support building with LLVM/Clang's `libc++`. * Address audit issue * Variant default does not honor `when` clause * Use `self.spec.satisfies()` instead of `with when()` * Fix silliness; improve consistency * Today was apparently a go-back-to-bed day
2023-12-11Bump up the version for ROCm-5.7.0 and ROCm-5.7.1 releases. (#40724)Sreenivasa Murthy Kolam55-60/+1911
* initial commit for rocm-5.7.0 and 5.7.1 releases * bump up ther version for 5.7.0 and 5.7.1 releases * update recipes to support 5.7.0 and 5.7.1 releases * bump up the version for ROCm 5.7.0 and ROCm-5.7.1 releases * bump up the version for composable-kernel amd miopen-hip * fix style errors * fix style errors in hip etc * renaming composable-kernel recipe * changes for composable_kernel * Revert "renaming composable-kernel recipe" This reverts commit 0cf6c6debfc7b12014f514af26144132ae187e71. * Revert "changes for composable_kernel" This reverts commit 05272a10a79cc14dc9c1afbda8fa4de87ea672ad. * bump up the version for hiprand * using the checksum for hiprand-5.7.1 * bump up the version for 5.7.0 and 5.7.1 releases * fix style errors * fix merge conflicts with the develop. * temp workaround for the error seen with rocm-5.7.0 when trying to generate the dependency file for runtime/legion/legion_redop.cu * fix build issue(work around) with legion * add patch for migraphx package to turn off ck * update to hip recipe * fix hip-path detection inside llvm clang driver * update llvm-amdgpu and rocm-validation-suite recipes * fix style errors * bump up the version for amdsmi for rocm-5.7.0 release * add support for gfx941,gfx942 for rocm-5.7.0 release onwards * revert changes to rocm.py file * added gfx941 and gfx942 to rocm.py and add the gfx942 to kokkos and new checksum the new version seem to support gfx942 * bump up the version for rccl for 5.7.1 * update the patch for rocm-openmp-extras for 5.7.0 * update mivisionx recipe for 5.7.0 release * add new dependencies for rocfft tests * port the fix for avx build, the start address of values_ buffer in KernelParameters is not correct as it is computed based on 16-byte alignment * set HIP_PATH=ROCM_PATH for 5.7.0 onwards * address review comments * revert adding xnack- and xnack+ to gfx940,gfx941,gfx942 as the prechecks were failing
2023-12-11[abseil-cpp] New version 20230802.1 (#41457)Chris Green1-0/+3
2023-12-11otf2: add v3.0.3 (#41499)wspear1-0/+1
* Add otf2 version 3.3 * Update var/spack/repos/builtin/packages/otf2/package.py --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-12-11New package: perl-test-file (#41510)Arne Becker1-0/+20
2023-12-11perl-class-tiny: New package (#41513)Arne Becker1-0/+20
2023-12-11Add new version of feq-parse (#41515)Joe Schoonover1-0/+1
The new feq-parse version includes fixes for ifort and ifx compilers Additionally, evaluation of parser objects with multidimension arrays is now supported.
2023-12-11libfabric: Add ucx provider variant (#41524)Kyle Gerheiser1-0/+2
2023-12-11perl-test-nowarnings: New package (#41539)Arne Becker1-0/+20
* perl-test-nowarnings: New package * Add myself as maintainer
2023-12-11intel-oneapi-compilers 2024.0.1: added new version to packages (#41555)Andrey Perestoronin2-1/+12
* add new packages * fix version
2023-12-11perl-test-weaken: New package (#41540)Arne Becker1-0/+20
2023-12-11perl-test-without-module: New package (#41541)Arne Becker1-0/+18
2023-12-11samtools/htslib add latest version (#41545)James Beal2-0/+7
* samtools/htslib add latest version * Given I work at the same institute as the authors I think it fair I am willing to review changes, if it's complex I can ask them over tea. --------- Co-authored-by: James Beal <jb23@sanger.ac.uk>
2023-12-11igv add latest version (#41546)James Beal1-0/+1
Co-authored-by: James Beal <jb23@sanger.ac.uk>
2023-12-11perl-bio-db-hts: add new package with version 3.01 (#41554)Christopher Christofi1-0/+19
* perl-bio-db-hts: add new package with version 3.01 * fix styling
2023-12-11Add eckit@1.24.5, ecmwf-atlas@{0.35.0,0.35.1,0.36.0} (#41547)Dom Heinzeller2-0/+4
* Add eckit@1.24.5 * Add ecmwf-atlas@0.35.1 * Add ecmwf-atlas@0.36.0
2023-12-11Add @climbfuji to fms maintainers (#41550)Dom Heinzeller1-1/+1
2023-12-11apple-clang: add new package (#41485)Massimiliano Culpo2-0/+111
* apple-clang: added new package * Add a maintainer * Use f-strings, remove leftover comment
2023-12-11fabtests: Add versions and update maintainer (#41525)Kyle Gerheiser1-1/+34
generated by cgit v1.2.3-60-g2f50 (git 2.42.0) at 2024-07-05 04:20:40 +0000