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2023-02-07xyce: change cmake cxx compiler variable (#35365)Paul Kuberry1-2/+2
2023-02-07py-fastrlock: add v0.8.1 (#35370)Adam J. Stewart1-2/+3
2023-02-07texinfo: Require `ncurses` (#35356)Mosè Giordano1-0/+1
I don't know if this is new in version 7.0, but to build `info`, which is a required executable at the end of the recipe, it is necessary to have a terminal library, otherwise you get ``` [...] checking for tgetent in -ltinfo... no checking for tgetent in -lncurses... no checking for tgetent in -lcurses... no checking for tgetent in -ltermlib... no checking for tgetent in -ltermcap... no checking for tgetent in -lterminfo... no configure: WARNING: info needs a terminal library, one of: tinfo ncurses curses termlib termcap terminfo [...] configure: WARNING: Could not find a terminal library among tinfo ncurses curses termlib termcap terminfo configure: WARNING: The programs from `info' directory will not be built. ``` then compilation runs, `info` is not built and installation fails according to Spack because the required executable is missing.
2023-02-06Support packages for using scitokens on OSG (#35334)Wouter Deconinck3-0/+136
* Support packages for using scitokens on OSG The Open Science Grid (OSG) encourages scitokens to provide certain services (e.g. writing to xrootd). Spack already supports this through scitokens-cpp and xrootd +scitokens-cpp. This adds py-htgettoken, a python utility to get a scitoken from a vault through web authentication. To support htgettoken, this also adds py-gssapi. This also adds the OSG CA cert collection which is typically at /etc/grid-security but pointed to in user installations by the X509_CERTS_DIR variable. This allows userspace through spack for functionality that otherwise depends on installing the RPMs provided by OSG. * fine, I'll fix style myself then * fix maintainers * py-gssapi: version before depends_on * remove list_url * add documentation on reason for git describe version numbers * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * better BEARER_TOKEN definition * import os * remove older version that don't build with setuptools --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-02-06wps: adding version 4.4 (#35358)snehring2-1/+45
2023-02-06xyce: add version 7.6.0 and RPATH patch for prior (#35360)Paul Kuberry1-0/+7
2023-02-06freesasa: add new package (#35192)Rocco Meli1-0/+41
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-02-06maeparser: add new package (#35191)Rocco Meli1-0/+32
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-02-06relion: add patch to repair DoublePrec_CPU=OFF build (#35317)Daniele Colombo2-0/+28
* relion: add patch to repair DoublePrec_CPU=OFF build * relion: added maintainer Co-authored-by: Daniele Colombo <daniele.colombo@fht.org>
2023-02-06rocm llvm-amdgpu package - Build libcxx and libcxxabi thru ↵Sreenivasa Murthy Kolam1-10/+19
LLVM_ENABLE_RUNTIMES flag. (#33610) * changes to enable LLVM_ENABLE_RUNTIMES for libcxx and libcxxabi * remove version update for 5.3.0 as it is done thru PR #33320 to enable ci and reviews
2023-02-06Update the ROCm packages for ROCm-5.4.0 release. (#35071)Sreenivasa Murthy Kolam54-131/+567
* initial commit for rocm-5.4.0 release * update the versions for more packages for 5.4.0 release * update the gallium patch for mesa for libllvm-15 for ROCm-5.4.0 release * update rocm-openmp-extras and rocwmma recipes for 5.4.0 release * fix build error for rocfft for 5.4.0 * address review comments for rocfft for 5.4.0 change * undo the removal of the older patch file * bump up the version for hipfft for 5.4.0 * fix the failure after the merge with develop * add recipes updates for 5.4.0 for migraphx.miopen-hip,miopen-opencl * address the review comments on the mesa patch.update the rdc package for 5.4.0 release * fix style errors
2023-02-06py-mypy: add v1.0.0 (#35362)Adam J. Stewart1-3/+1
2023-02-06GenericBuilder: facilitate post-install phase test callbacks (#35314)Tamara Dahlgren1-3/+7
2023-02-06acts: new versions 21.1.1, 22.0.1, 23.0.0 (#35227)Wouter Deconinck1-0/+4
* acts: new versions 21.1.1, 22.0.1, 23.0.0 New versions: - [major 23.0.0](https://github.com/acts-project/acts/compare/v22.0.0...v23.0.0): - new option `ACTS_BUILD_PLUGIN_GEANT4` -> enabled with existing variant `geant4` - new option `ACTS_BUILD_EXAMPLES_BINARIES`: - it is my understanding that the binaries for examples are deprecated (in favor of python examples); warnings to this effect have been printed for a few versions, and now the building of binaries is disabled by default, - rather than introducing a variant to enable deprecated behavior for only one or two versions, I propose that we just follow the default and keep this disabled. - [bugfix 22.0.1](https://github.com/acts-project/acts/compare/v22.0.0...v22.0.1) (no build system changes) - [bugfix 21.1.1](https://github.com/acts-project/acts/compare/v21.1.0...v21.1.1) (no build system changes) * acts: correct 23.0.0 sha Co-authored-by: Hadrien G. <knights_of_ni@gmx.com>
2023-02-06estarlight, dpmjet: new packages (#32834)Wouter Deconinck2-0/+77
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-02-06Restore openspeedshop and openspeedshop-utils, update the cbtf components ↵Jim Galarowicz9-5/+790
(#35052)
2023-02-06flux-core: add missing dependency(#35312)Vanessasaurus1-0/+1
2023-02-06r-cvxr: add new package with dependencies (#35275)Glenn Johnson4-0/+107
2023-02-06qt: new version 5.15.8 (#35352)Wouter Deconinck1-0/+1
No build system changes, just bug fixes. https://github.com/qt/qtbase/compare/v5.15.7-lts-lgpl...v5.15.8-lts-lgpl Builds fine on linux-ubuntu22.10-skylake.
2023-02-06wrf: add optional netcdf_classic variant (#35261)Stephen Sachs1-0/+3
Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2023-02-06hpx: further constrain version for mimalloc patch (#35257)Mikael Simberg1-1/+1
2023-02-06reprimand: add v1.5 (#35245)Erik Schnetter1-6/+13
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-02-06bump: nss + dep (#35294)Harmen Stoppels2-8/+12
2023-02-06amdlibflame: needs modern make (#35297)Erik Heeren1-0/+1
See https://github.com/flame/libflame/issues/55
2023-02-06tau: updating python version restriction (#35268)snehring1-1/+3
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-02-06enzyme: add v0.0.48 (#35304)William Moses1-0/+2
2023-02-06ReFrame: add versions up to v4.0.4 (#35330)Vasileios Karakasis1-1/+4
2023-02-06pumi and zoltan: allow building when no fortran compiler is available (#35333)Cameron Smith2-2/+4
2023-02-06assimp: new version 5.2.5 (#35335)Wouter Deconinck1-0/+1
Bugfix release only. No build system changes.
2023-02-06intel-gtpin: add v3.2.2 (#35342)Wileam Y. Phan1-1/+7
2023-02-06libdrm: new versions 2.4.111-114 (#35343)Wouter Deconinck1-1/+8
As of 2.4.113, the flag for man-pages is now a feature, so true/false is now enabled/disabled. Other similarly changed options are not used in the spack recipe (i.e. experimental kms drivers).
2023-02-06sherpa: new version 2.2.14 (#35344)Wouter Deconinck1-0/+2
"Version 2.2.14 contains a critical bug fix"
2023-02-06mash: added patch with limits header (#35209)Luke Diorio-Toth2-1/+15
Co-authored-by: luke <luke@DESKTOP-E4JNTC1.attlocal.net>
2023-02-06libxc 6.0.0: fix a bug affecting CP2K (#35347)Rémi Lacroix1-0/+5
The patch fixes a missing comma at end of line in mgga_xc_b97mv.c.
2023-02-06n2p2: add v2.2.0. (#35348)Rémi Lacroix1-1/+5
2023-02-06py-numpy: add v1.24.2 (#35350)Adam J. Stewart1-0/+1
2023-02-06Add pika 0.12.0 and pika-algorithms 0.1.1 (#35296)Mikael Simberg2-1/+4
2023-02-05qt: new versions 6.4.0, 6.4.1, 6.4.2 (#34698)Wouter Deconinck5-162/+129
* qt: new versions 6.4.0, 6.4.1 - New libpsl vendored dependency in qt-base. - New embree and tinyexr dependency in qt-quick3d. We need to figure out a better way to deal with these vendored dependencies in src/3rdparty. Removing them was a way to make sure they are not used unintentionally. Many of these dependencies cannot be overridden with a QT_FEATURE_system_* flag and are included directly in cpp files. Many change versions from release to release, so even if they use system (ie spack managed) versions we need to support this in the depends_on lines. What we can rely on? - src/3rdparty is where vendored stuff is stored - not much else... Possible ways to deal with this: - Change vendor_deps_to_keep to dict with versions, eg ``` vendor_deps_to_keep = { "xatlas": "@6:", "embree": "@6.4:", "tinyexr": "@6.4:", } ``` - Similarly introduce system_deps_to_use: ``` system_deps_to_use = { "assimp@5.2:": "@6:", } ``` and derive depends_on and QT_FEATURE_system_* from this dict. * qt-*: new version 6.4.2, invert vendored pkgs logic * qt-base: fix vendor_deps_to_avoid typo * qt-*: move lots into QtPackage base layer
2023-02-03Require 0.7.1 for ExaGO 1.5.0+. (#35331)Cameron Rutherford1-1/+1
2023-02-03py-packaging: add constrain on python version (#35325)Massimiliano Culpo1-0/+3
2023-02-03py-igor: new package (#35229)Erik Heeren1-0/+19
* py-igor: new package * py-igor: review remarks
2023-02-03Add py netpyne, meautility, and lfpykit (#35262)Erik Heeren3-0/+73
* py-netpyne: new package with dependencies * py-netpyne, py-meautility, py-lfpykit: license update * py-netpyne: review remarks * py-netpyne: style * py-netpyne: don't limit python version
2023-02-03py-glmsingle: add 1.1 (#35311)Manuela Kuhn1-12/+15
2023-02-02CMake: Add version 3.25.2 (#35196)Rémi Lacroix1-0/+1
2023-02-02py-torchmetrics: add v0.11.1 (#35260)Adam J. Stewart1-0/+1
2023-02-02py-black: add v23.1.0 (#35279)Adam J. Stewart2-6/+9
* py-black: add v23.1.0 * py-packaging: add v23.1.0
2023-02-02Update to latest version. (#35309)Larry Knox1-3/+3
Update hdf5-vol-external-passthrough to latest version compatible with HDF5 1.14
2023-02-02py-minkowskiengine: new package (sparse tensor autodiff by Nvidia) (#35302)Wouter Deconinck1-0/+32
* py-minkowskiengine: new package (sparse tensor autodiff by Nvidia) This python package (with cuda support) provides torch support for sparse tensors. The `pybind11` headers are not found without the patch to `setup.py`. * [@spackbot] updating style on behalf of wdconinc * py-minkowskiengine: depends_on numpy, pybind11 type=link; no patch * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2023-02-02zlib package: fix build on Windows (#35103)John W. Parent1-3/+3
2023-02-02py-getorganelle: rename to getorganelle and add version 1.7.7.0 (#35270)snehring2-1/+40
* py-getorganelle: rename to getorganelle and add version 1.7.7.0 * py-getorganelle: deprecating package
generated by cgit v1.2.3-60-g2f50 (git 2.42.0) at 2024-07-02 22:49:27 +0000