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2023-11-22fzf: add v0.44.1 (#41204)Alec Scott1-0/+1
2023-11-22pulseaudio: add missing m4 dependency (#41216)Manuela Kuhn1-0/+1
2023-11-22aocc: help compiler find include paths and libstdc++.so (#40450)Stephen Sachs1-0/+10
Add --gcc-toolchain option by default. Only add these paths if c++ libs and include files are available and the compiler was built with gcc
2023-11-22edm4hep: add latest tag for 0.10.2 (#41201)Thomas Madlener1-0/+1
2023-11-22onnxruntime: fix the call to as_string() operator (#41087)LucaMarradi1-0/+6
* onnxruntime: fix the call to as_string() operator * Update var/spack/repos/builtin/packages/py-onnxruntime/package.py Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> * Update var/spack/repos/builtin/packages/py-onnxruntime/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-onnxruntime/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-onnxruntime: rm now-unused stringpiece_1_10.patch --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-22hub: add v2.14.2, update to go module (#41183)Tom Scogland1-7/+29
* packages/hub: add new version, update to module Hub now uses a go module to build, needs different env vars, and we're on a very, very old version before that. Deprecate the old ones so we can clean out that old build once we pass a spack version. * cleanup suggested by @adamjstewart
2023-11-22perl: add missing gmake dependency (#41210)Michael Kuhn1-0/+1
2023-11-22python: add missing gmake dependency (#41211)Michael Kuhn1-0/+1
2023-11-21Update py-scikit-build-core to version 0.6.1 (#40779)Chris Richardson1-0/+4
* Update to latest version * Fix linebreak * Make suggested changes * bumped to 0.6.1 * Update var/spack/repos/builtin/packages/py-scikit-build-core/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Chris Richardson <cnr12@cam.ac.uk> Co-authored-by: Matt Archer <ma595@cam.ac.uk> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-21gettext: add v0.22.4 (#41189)Alec Scott1-0/+1
2023-11-21spack style: fix isort on sl:7 (#41133)Massimiliano Culpo1-4/+21
Bump the minimum version required for isort. This should fix an issue reported on Scientific Linux 7, and due to: https://github.com/PyCQA/isort/issues/1363
2023-11-20elfutils: add version 0.190 (#41187)Mark W. Krentel1-0/+1
2023-11-20qt-base: have QtBase provide qmake, ont QtPackage (#41186)Wouter Deconinck1-2/+2
2023-11-20gromacs: fix newly added variant (#41178)Mark Abraham1-1/+1
In practice, one can only compiler for the Intel Data Center Max GPU via a SYCL build and the oneAPI compiler. This is unlikely to change, so we can be explicit about that.
2023-11-20py-grpcio* do not assume lib / header dir (#41182)Harmen Stoppels2-4/+8
2023-11-20rust: add v1.73.0 and add support for external openssl certs (#41161)Alec Scott2-23/+61
Co-authored-by: Tom Scogland <scogland1@llnl.gov>
2023-11-20llvm: Remove python bindings when >= v17 (#41160)Alec Scott1-1/+4
Co-authored-by: Tom Scogland <scogland1@llnl.gov>
2023-11-20Catch2: add variant to choose cxx standard (#40996)Marc Perache1-1/+5
2023-11-20openblas: optimize flags for A64FX (#41093)Sergio Sánchez Ramírez1-0/+15
2023-11-20py-scipy: add v1.11.4 (#41158)Adam J. Stewart1-0/+1
2023-11-20mpich: support ch3:sock for a non busy-polling option (#40964)Scott Wittenburg1-5/+10
2023-11-20restic: add v0.16.2 (#41168)Alec Scott1-0/+1
2023-11-20bfs: add v3.0.4 (#41165)Alec Scott1-0/+1
2023-11-20rclone: add v1.64.2 (#41166)Alec Scott1-0/+1
2023-11-20glab: add v1.35.0 (#41167)Alec Scott1-0/+1
2023-11-20Remove a maintainer from CMS packages (#41170)iarspider13-22/+1
2023-11-20sherpa: only enable_or_disable in v3: (#41162)Wouter Deconinck1-1/+1
2023-11-19npm: only depend on libvips when @6, remove deprecated versions (#41159)Alec Scott1-35/+2
Co-authored-by: Tom Scogland <scogland1@llnl.gov>
2023-11-19elbencho: add new version and git master branch (#41136)Ethan Williams1-0/+4
* elbencho add new version and git master branch * Update var/spack/repos/builtin/packages/elbencho/package.py Co-authored-by: Alec Scott <alec@bcs.sh> * formatting fix requested by @alecbcs * remove whitespace added in blank line by github auto resolve --------- Co-authored-by: Ethan W <mail@ethanwilliams.xyz> Co-authored-by: Alec Scott <alec@bcs.sh>
2023-11-18votca: add v2023 (#41100)Christoph Junghans1-0/+1
2023-11-18gromacs: Add new variants and clarify existing ones (#41115)Mark Abraham1-2/+45
* gromacs: Add new variants and clarify existing ones Add new variants that reflect existing capabilities and defaults in the upstream build system. Add other existing constraints that were not yet specified. * conform to style * Fix missing hyphens * Correct cmake variable names
2023-11-18geant4: new version 11.1.3 (#41112)Wouter Deconinck1-1/+2
* geant4: new version 11.1.3 Release notes: https://geant4.web.cern.ch/download/release-notes/notes-v11.1.3.txt * geant4: cmake patch with expat fix only until 11.1.2.
2023-11-18heffte: add sycl variant (#41132)Mark Abraham1-0/+9
* heffte: add sycl variant This targets the oneAPI SYCL compiler with oneMKL as FFT implementation library. * Require oneAPI compiler for sycl variant
2023-11-18libksba: add v1.6.5 (#41129)Massimiliano Culpo1-0/+1
2023-11-18py-matplotlib: add v3.7.4, v3.8.2 (#41156)Adam J. Stewart1-0/+2
2023-11-18Automated deployment to update package flux-sched 2023-11-18 (#41153)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-11-18Automated deployment to update package flux-core 2023-11-18 (#41154)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-11-18Automated deployment to update package flux-security 2023-11-18 (#41152)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-11-18py-pygithub: new versions, dependencies (#41072)Wouter Deconinck1-3/+12
* py-pygithub: new versions, dependencies * py-pygithub: reordered dependencies per requirements.txt * py-pygithub: depends on py-setuptools-scm
2023-11-18py-bokeh: new version 3.3.1, and supporting packages (#41089)Wouter Deconinck2-3/+39
* py-bokeh: new version 3.3.1 * py-xyzservices: new package * py-bokeh, py-xyzservices: update homepages Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * py-bokeh: depends on newer py-numpy Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-18Update py-elephant (#39200)Moritz Kern1-24/+32
* add elephant version v0.12.0 and 0.13.0 * update copyright * reformat according to black format errors * restore maintainers directive * Update var/spack/repos/builtin/packages/py-elephant/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * add dependency python 3.8+ * sorted dependencies * sort dependencies from newest to oldest * add deps for @master * removed dependency for master, since it is included in 0.12.0: * removed dependency for python 3.7+ , since 3.7+ is the lowest supported version anyway * removed specific deps for master, since master is always newer than all stable releases * updated numpy dependency for Elephant 0.12.0: * Update var/spack/repos/builtin/packages/py-elephant/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-elephant/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * removed upper bounds for py-quantities, omitting v0.14.0 * add elephant v0.14.0 * update required quantities version --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-18py-cleo: add versions 2.0.0 2.0.1; add maintainers (#40611)Lydéric Debusschère5-9/+66
* py-cleo: add versions 2.0.0 2.0.1; add maintainers * py-cleo: add forgotten dependence * py-cleo: update from review: remove preferred version, remove a dependence, fix py-rapidfuzz version * py-cleo: deprecated version 1.0.0a5; add version 1.0.0; update dependences * py-cleo: add version 2.1.0; update version range of dependences * py-crashtest: add version 0.4.1, dependence of py-cleo * py-cleo: update dependence Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-cleo: update dependence py-clikit Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-cleo: update dependence py-rapidfuzz Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-rapidfuzz: add version 2.2.0 dependence of py-cleo@2 * py-cleo: fix version range of py-crashtest * py-rapidfuzz: fix dependences; add py-rapidfuzz-capi and py-jarowinkler --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-18Release DLIO Profiler Py 0.0.2 (#41127)Hariharan Devarajan1-3/+10
2023-11-18py-jsonpath-ng: version bump (#41078)Erik Heeren1-2/+4
* py-jsonpath-ng: version bump * py-jsonpath-ng: fix typo in version number
2023-11-18py-gitpython: version bump (#41079)Erik Heeren1-0/+2
2023-11-18py-pyh5py: reorder dependencies from newest version to oldest (#41137)Juan Miguel Carceller1-12/+12
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-11-18Fix invalid escape sequences (#41130)Michael Kuhn3-4/+6
Using Python 3.12 in a freshly cloned Spack repository results in warnings such as this: ``` ==> Warning: invalid escape sequence '\$' ==> Warning: invalid escape sequence '\(' ==> Warning: invalid escape sequence '\.' ==> Warning: invalid escape sequence '\.' ``` These will turn into errors in 3.13, so fix them. All of them actually do not need to be regexes, so convert them into normal strings.
2023-11-18Update py-quantities (#39201)Moritz Kern1-6/+7
* add version 0.14.1 * formatting * style checks * fix style errors * remove old versions * fix typo * style * update maintainers directive * sort dependencies from newest to oldest * Update var/spack/repos/builtin/packages/py-quantities/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-quantities/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * sort dependencies from newest to oldest * removed upper bounds for python version * Update var/spack/repos/builtin/packages/py-quantities/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * remove dependency on Python 3.7 +, since 3.7 is the lowest supported version anyway --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-11-17Hydrogen package: avoid newer openblas on power (#41143)Brian Van Essen1-1/+2
2023-11-17Add cxxstd variant to ecflow, update with latest ecflow version (#41120)Stephen Herbener1-1/+5
* Added recent versions to ecflow/package.py, as well as added a cxxstd variant that is needed to set BOOST_NO_CXX98_FUNCTION_BASE appropriately when building with C++17 standard. * Fixed pep8 style error in the ecflow package.py script. * Remov * Removed cxxstd variant since the ecflow cmake configuration was already specifying to use the c++17 standard for newer versions. The use of the BOOST_NO_CXX98_FUNCTION_BASE define is now triggered by the ecflow version.
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