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2021-10-04cp2k: bugfix for intel oneapi (#26143)Tiziano Müller1-5/+36
2021-10-04arm: added download and better detection (#25460)Oliver Perks1-15/+92
2021-10-04gnupg: Add version 1 (#23798)Harmen Stoppels1-17/+45
From the gnupg.org website: > GnuPG 1.4 is the old, single binary version which still support the > unsafe PGP-2 keys. However, it lacks many modern features and will > receive only important updates. I'm starting to appreciate gpg1 more, because it is relocatable (gng2 has hard-coded paths to gpg-agent and other tools) and it does not require gpg-agent at all.
2021-10-04evtgen: fix mac build and version 2.0.0 with pythia >= 8.304. (#25933)iarspider2-0/+50
2021-10-04py-duecredit: add v0.6.5 (#26465)Manuela Kuhn1-2/+3
2021-10-04py-nibabel: add v2.4.1 (#26462)Manuela Kuhn1-3/+7
2021-10-04podio: remove build_type variant (provided by base package class already) ↵Valentin Volkl1-4/+0
(#26463)
2021-10-04freebayes: Fix running the testsuite and add pkgconfig (#26440)Bernhard Kaindl1-0/+20
freebayes needs the tools of the vcflib it includes to run tests
2021-10-04graph500: added option -fcommon for gcc@10.2 (#25367)Nikolay Simakov1-0/+9
* graph500: added option -fcommon for gcc@10.2:, otherwise failed to build with "multiple definition of `column'" * graph500: moved setting cflag to flag_handler
2021-10-04libunwind: add variants (#26099)iarspider1-10/+44
2021-10-04py-pybids: add v0.9.5 (#26461)Manuela Kuhn1-3/+6
2021-10-04Disable tests on hip for cmake 3.21 (#26460)Harmen Stoppels1-1/+1
2021-10-04py-mne: add new package (#26446)Manuela Kuhn1-0/+27
2021-10-04py-sphinxcontrib-napoleon: add new package (#26457)Manuela Kuhn1-0/+19
2021-10-04py-templateflow: add new package (#26458)Manuela Kuhn1-0/+23
2021-10-04hdf5: allow implicit functions on apple-clang (#26409)Seth R. Johnson1-7/+7
Work around issues in older hdf5 build and overzealous build flags: ``` >> 1420 /var/folders/j4/fznvdyhx4875h6fhkqjn2kdr4jvyqd/T/9te/spack-stage/spack-stage-hdf5-1.10.4-feyl6tz6hpx5kl7m33avpuacwje2ubul/spack-src/src/H5Odeprec.c:141:8: error: implicit decl aration of function 'H5CX_set_apl' is invalid in C99 [-Werror,-Wimplicit-function-declaration] ```
2021-10-04python: correctly disable ~tkinter when @3.8 (#26365)Seth R. Johnson2-0/+15
The older patch does not apply so the build ends up failing: ``` 1539 In file included from /private/var/folders/fy/x2xtwh1n7fn0_0q2kk29xkv9vvmbqb/T/s3j/spack-stage/spack-stage-python-3.8.11 -6jyb6sxztfs6fw26xdbc3ktmbtut3ypr/spack-src/Modules/_tkinter.c:48: >> 1540 /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/tk.h:86:11: f atal error: 'X11/Xlib.h' file not found 1541 # include <X11/Xlib.h> 1542 ^~~~~~~~~~~~ 1543 1 error generated. ```
2021-10-04Update byacc (#25837)iarspider1-3/+4
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com>
2021-10-04papi: new variants rocm and rocm_smi (#26214)G-Ragghianti1-6/+27
2021-10-04git-annex: add 8.20210804 for amd64 (#26449)Manuela Kuhn1-2/+11
2021-10-04py-pockets: add new package (#26452)Manuela Kuhn1-0/+18
2021-10-04FEniCSx: fix CMake root directory and dependency versions (#26445)Garth N. Wells3-6/+7
2021-10-04py-seaborn: add v0.11.2 (#26447)Manuela Kuhn1-0/+1
2021-10-04py-transforms3d: add new package (#26448)Manuela Kuhn1-0/+17
2021-10-04ocaml: add v4.13.1 (#26453)Joseph Wang1-1/+1
This is needed in order to make it work with glibc-2.34
2021-10-03ArborX: Explicitly set path to Kokkos (#26347)Daniel Arndt1-5/+4
* Explicitly set path to Kokkos for ArborX testing * Improve formatting * Update var/spack/repos/builtin/packages/arborx/package.py Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov> * Remove blank line Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2021-10-03source-highlight: add gcc11 patch (#26412)Hector1-1/+6
2021-10-03PICSAR: added support for GCC >10.0 and arm compiler (#24927)Lorién López Villellas1-0/+8
* -fallow-argument-mismatch flag added when compiling with GCC to avoid a compilation error when using a GCC version > 10.0. Co-authored-by: Haz99 <jsalamerosanz@gmail.com> * Filtered every occurrence of "!$OMP SIMD SAFELEN(LVEC2)" when compiling with nvhcp to avoid a compilation error. Co-authored-by: Haz99 <jsalamerosanz@gmail.com> * Line with more than 80 characters split into multiple lines. Co-authored-by: Haz99 <jsalamerosanz@gmail.com>
2021-10-03Remove .99 from version ranges (#26422)Harmen Stoppels603-1794/+1794
In most cases, .99 can be omitted thanks to #26402 .
2021-10-03DiHydrogen: Specify required NVSHMEM variants (#26384)Tim Moon1-1/+2
2021-10-03chombo: several build fixes: csh, space regex and install (#26424)Bernhard Kaindl1-21/+32
See description of the the PR for details on the changes.
2021-10-03bison: new versions 3.8:3.8.2 (#26439)Harmen Stoppels1-0/+3
2021-10-03form: use version tarballs, fix and enable gmp and zlib variants (#26425)Takahiro Ueda1-14/+11
Co-authored-by: Bernhard Kaindl <43588962+bernhardkaindl@users.noreply.github.com> Co-authored-by: iarspider <iarspider@gmail.com>
2021-10-03meson: add 0.59.2 (#26430)Michael Kuhn1-0/+1
2021-10-03openblas: add 0.3.18 (#26429)Michael Kuhn1-0/+1
2021-10-03py-svgutils: new package (#26437)Manuela Kuhn1-0/+18
2021-10-03p4est: bump/update to 2.8 (#26081)Marc Fehling1-1/+2
2021-10-02py-packaging: bump version to 21.0 (#26436)Manuela Kuhn1-0/+3
2021-10-02py-attrs: bump version to 21.2.0 (#26435)Manuela Kuhn1-0/+2
2021-10-03py-nitransforms: new package (#26434)Manuela Kuhn1-0/+26
2021-10-03podio: add supported CMAKE_BUILD_TYPE values (#26432)Wouter Deconinck1-1/+1
2021-10-03py-pybids: bump version to 0.13.2 (#26433)Manuela Kuhn1-0/+1
2021-10-03atmi: replace /usr/bin/rsync with depends_on rsync (#26353)Sreenivasa Murthy Kolam2-0/+71
2021-10-02py-ipyvtk-simple: new package (#26431)Manuela Kuhn1-0/+20
2021-10-02damaris: bump version to 1.5.0, add variant examples (#26220)Josh Bowden1-8/+12
2021-10-02py-ipycanvas: new package (#26426)Manuela Kuhn1-0/+23
2021-10-02fltk: new version 1.3.7, new variant xft (#26423)Olivier Cessenat1-0/+14
2021-10-02py-ipyevents: add new package (#26427)Manuela Kuhn1-0/+21
2021-10-02cddlib: use github URLs and bump version (#26315)Robert Romero1-10/+11
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2021-10-02amrex: bump version to 21.10 (#26416)Weiqun Zhang1-1/+2
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