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This restores the use of Package.headers when computing -I options
for building a package that was added in #8136 and reverted in
#10604. #8136 used utility logic that located all header files in
an installation prefix, and calculated the -I options as the
immediate roots containing those header files.
In some cases, for a package containing a directory structure like
prefix/
include/
ex1.h
subdir/
ex2.h
dependents may expect to include ex2.h relative to 'include', and
adding 'prefix/include/subdir' as a -I was causing errors,
in particular if ex2.h has the same name as a system header.
This updates header utility logic to by default return the base
"include" directory when it exists, rather than subdirectories.
It also makes it possible for package implementers to override
Package.headers to return the subdirectory when it is required
(for example with libxml2).
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- Switch all libhio tarball listings to sha256 checksums
- Correct typo in alert message in /lib/spack/spack/util/module_cmd.py: fucntion -> function
https://github.com/hpc/libhio/releases
Released 2019-02-01
Verification builds on LANL Darwin:
**Intel Xeon**
Architecture: x86_64
CPU op-mode(s): 32-bit, 64-bit
Byte Order: Little Endian
CPU(s): 40
On-line CPU(s) list: 0-39
Thread(s) per core: 2
Core(s) per socket: 10
Socket(s): 2
NUMA node(s): 2
Vendor ID: GenuineIntel
CPU family: 6
Model: 63
Model name: Intel(R) Xeon(R) CPU E5-2660 v3 @ 2.60GHz
Stepping: 2
CPU MHz: 1198.779
CPU max MHz: 3300.0000
CPU min MHz: 1200.0000
BogoMIPS: 5193.70
Virtualization: VT-x
L1d cache: 32K
L1i cache: 32K
L2 cache: 256K
L3 cache: 25600K
NUMA node0 CPU(s): 0-9,20-29
NUMA node1 CPU(s): 10-19,30-39
Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt aes xsave avx f16c rdrand lahf_lm abm cpuid_fault epb invpcid_single pti intel_ppin tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid cqm xsaveopt cqm_llc cqm_occup_llc dtherm ida arat pln pts
`
[+] /scratch/users/dantopa/new-spack/strawman.pr.libhio/opt/spack/linux-centos7-x86_64/gcc-4.8.5/libhio-1.4.1.3-s4fnmesfp65trhks5qi3it5p73ssfpsp
[+] /scratch/users/dantopa/new-spack/strawman.pr.libhio/opt/spack/linux-centos7-x86_64/gcc-4.8.5/libhio-1.4.1.2-fkgh5vqpijvwqywffmokgmsglqxwfrtl
`
**Arm**
Architecture: aarch64
Byte Order: Little Endian
CPU(s): 256
On-line CPU(s) list: 0-255
Thread(s) per core: 4
Core(s) per socket: 32
Socket(s): 2
NUMA node(s): 2
Model: 0
BogoMIPS: 400.00
L1d cache: 32K
L1i cache: 32K
L2 cache: 256K
L3 cache: 32768K
NUMA node0 CPU(s): 0-127
NUMA node1 CPU(s): 128-255
Flags: fp asimd evtstrm aes pmull sha1 sha2 crc32 atomics cpuid asimdrdm
`
[+] /scratch/users/dantopa/new-spack/strawman.pr.libhio/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/libhio-1.4.1.3-q6nnwiy6bi7ktnghdsngwamom23zpmgy
[+] /scratch/users/dantopa/new-spack/strawman.pr.libhio/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/libhio-1.4.1.2-y6nwovff3qbdy242zc4x2toloz6xpcvm
`
2019-02-25
Signed-off-by: Daniel Topa <dantopa@lanl.gov>
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Also add v0.4.0 and remove version lower bound on petsc4py
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- Add support for pmix (optional)
- Install pmi2 header and library
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* working on updating to cmake
* generic package, any ver of cmake
* install for autotools or cmake
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* Add post-installation tests to Python package
* libbsd does not build on macOS
* Make Python dependencies optional
* Add readline dep, remove ncurses patch, fix autoreconf
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Also replace MD5 hashes with SHA256 hashes for older versions
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Update older md5 checksums to sha256. Require CMake >= 3.6.0 (updated
from 3.5.0). Remove some third-party depends_on statements (which
were commented out before).
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Extract implicit xenv dependency into a new package and add it as an
explicit dependency. Update Gaudi to explicitly depend on older
versions of xenv rather than the latest develop because that
conflicts with Spack's compiler wrappers.
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The nvptx installation support phase (added in 040b658) was always
running for gcc regardless of whether +nvptx was enabled. This
removes the "@when" syntax (which apparently is not working) and
adds a check inside of the "nvptx_install" function to bail out if
+nvptx is not enabled.
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Add optional support for Nvidia PTX
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On macOS, the build of libxxhash is performed by a bare `make`
launched by `MakePackage`s default `build` phase. As `prefix`
is not set at this point, the library gets compiled with a hard-coded
install name of `/usr/local/libxxhash.dylib`. Downstream clients,
in the tested case Root, will then fail to build as the install name
is incorrect.
Move setting of `prefix` from `install` to `edit` so that it
propagates to subsequent `build` and `install` phases.
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* QE hdf5 is now a multi-valued variant. Update conflicts accordingly.
* Update dependencies for hdf5 multi-valued variant. Bug fix: high-level hdf5 library needs to be a hard dependecy.
* Support for HDF5 serial interface. Note that this is not supported in QE autoconf, but will be fixed in the next official release.
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- new GitHub home
- new 3.2 release
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- Add support for nemesis:ofi netmod
- Add missing pkg-config and libxml2 dependencies
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Refactor dependencies, increase new min versions, add
mpi4py variant.
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Add the latest bugfix release.
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add the lastest bugfix release of Catch2
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* Support in QMCPACK for CUDA_ARCH flag.
* No need to have explicit CUDA variant anymore.
* Internal QMCPACK CMake assumes a minimum GPU architecture if none is provided.
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* cp2k: archive the Makefile after a successful installation
* cp2k: all checksums are now sha256
* libint: all checksums are now sha256 + added versions 2.4.X
* libxc: all checksums are now sha256 + added version 4.3.2
* cp2k: os.path.join instead of join_path + simplified openmp flags
* cp2k: turned into a MakefilePackage
* cp2k: refactored edit method so that Makefile writing happens last
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* pythia6: fix issue validating integer input.
* pythia6: account for apparent update of example data file.
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* xrootd: add cxxstd variant.
* xrootd: support for recent and upcoming versions.
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* icu4c: Add cxxstd variant
For versions supported in Spack, ICU4C defaults to the C++11.
Provide a variant to default to this, plus options for C++14
and 17 if dependees require for ABI compatibility.
* icu4c: cxxstd variant cannot be multi
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* Add a RELAX package
* Add a Gaudi package
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(#10518)
* Updated Geant4 and dependencies clhep and vecgeom to use cxxstd= variant so that it is applied consistently.
* Make standalone geant4 data packages that are used when data is not installed with geant4. This allows installing the data files are externals that can be common to many compiler version.
* move geant4 data package dependencies to umbrella package geant4-data
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Fixes #7855
Closes #8070
Closes #2645
When searching for library directories (e.g. to add "-L" arguments to
the compiler wrapper) Spack was only trying the "lib/" and "lib64/"
directories for each dependency install prefix; this missed cases
where packages would install libraries to subdirectories and also was
not customizable. This PR makes use of the ".headers" and ".libs"
properties for more-advanced location of header/library directories.
Since packages can override the default behavior of ".headers" and
".libs", it also allows package writers to customize.
The following environment variables which used to be set by Spack
for a package build have been removed:
* Remove SPACK_PREFIX and SPACK_DEPENDENCIES environment variables as
they are no-longer used
* Remove SPACK_INSTALL environment variable: it was not used before
this PR
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