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2023-01-30Bugfix: Update Petsc Python dependency (#35216)Tamara Dahlgren1-1/+3
* Bugfix: Update Petsc python dependency for at least 3.18: * Update var/spack/repos/builtin/packages/petsc/package.py Co-authored-by: Satish Balay <balay@mcs.anl.gov>
2023-01-30rocblas: remove unnecessary conflicts (#35232)Cory Bloor1-2/+0
The gfx906:xnack- and gfx908:xnack- targets were introduced in ROCm 4.1 and replaced gfx906 and gfx908 as default build targets, but the library can still be built for gfx906 and gfx908 if requested.
2023-01-30mpich: add 4.0.3 and 4.1 releases (#35218)Ken Raffenetti1-0/+2
2023-01-30montage: fixing compilation issues for newer gcc versions (#35220)snehring1-0/+7
2023-01-30apptainer: update constraint on go dependency (#35230)simonleary-umass-edu1-0/+2
2023-01-30hypre: Update URL using citation instructions from ↵Satish Balay1-3/+1
https://github.com/hypre-space/hypre/wiki/Citing-hypre (#35225)
2023-01-30adios2: allow building on Windows (#35102)John W. Parent1-6/+17
2023-01-30OmpSs: add v2022.11 (#35228)aleixrocks1-5/+13
2023-01-29e4s oneapi: use oneapi@2023.0.0 (#34634)eugeneswalker1-0/+6
2023-01-29gmake: Fix too many levels of symbolic links error (#35224)Alec Scott1-0/+3
* gedit: Fix too many levels of symlinks error * Fix package formatting with black
2023-01-28freetype: add CMake support (#35107)John W. Parent1-2/+20
2023-01-28xz: add 5.4.1 and 5.2.10 (#35172)Michael Kuhn1-0/+2
2023-01-27Added newer versions of PyAMG and added dependencies for 4.2 and later. (#35185)Ben Cowan1-4/+8
* Added newer versions of PyAMG and added dependencies for 4.2 and later. * Fixed dependencies.
2023-01-27New Spack package: Palace (#35189)Sebastian Grimberg1-0/+120
2023-01-27Added e4s-cl package (#35117)Jean-Baptiste Skutnik7-1/+95
* Added e4s-cl package * Version order change * Added e4s-cl dependencies * Added python-sotools dependency * [@spackbot] updating style on behalf of spoutn1k * Add missing versions to py- packages * Fix style * [@spackbot] updating style on behalf of spoutn1k * Update var/spack/repos/builtin/packages/e4s-cl/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/e4s-cl/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-python-sotools/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Add docker removing patch for e4s-cl Co-authored-by: spoutn1k <spoutn1k@users.noreply.github.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-01-27py-nexusforge: add with dependencies (#35208)Erik Heeren9-3/+187
* py-nexusforge: add with dependencies * py-pyshacl, py-sseclient: more style * py-hjson, py-nexus-sdk, py-nexusforge, py-puremagic: more style * py-pyshacl: license update * py-nexusforge, py-prettytable, py-pyshacl: review remarks * py-nexusforge: make the variant mean something Too hasty to commit...
2023-01-27Py ipyparallel (#35178)Erik Heeren1-3/+4
* py-ipyparallel: add 8.4.1, which builds with py-hatchling * py-ipyparallel: copyright and redundant py-setuptools dependency * py-ipyparallel: py-packaging was dropped after 8.0.0
2023-01-27New patch release SLEPc 3.18.2 (#35176)Jose E. Roman2-1/+3
2023-01-27libblastrampoline: Add v5.3.0 and v5.4.0 (#35194)Mosè Giordano1-0/+2
2023-01-27Add a `maintainers` directive (#35083)Massimiliano Culpo3-3/+19
fixes #34879 This commit adds a new maintainer directive, which by default extend the list of maintainers for a given package. The directive is backward compatible with the current practice of having a "maintainers" list declared at the class level.
2023-01-26py-nptyping, py-typish: add package (#35126)Erik Heeren2-0/+42
* py-typish: add package * py-typish: style fix * py-nptyping: new package * py-nptyping, py-typish: review remarks * py-nptying: style * py-nptyping: generic url, avoid pypi for now
2023-01-26py-deap: add 1.3.3 (#35175)Erik Heeren1-0/+1
2023-01-26py-rasterio: add v1.3.5 (#35167)Adam J. Stewart1-0/+1
2023-01-26wrf: Fix patching of config file when using GCC for v3.9.1.1 (#35140)Mosè Giordano1-2/+8
The regex doesn't actually work because dollar signs and parentheses have to be escaped. Also, compiling with OpenMPI requires defining the macro `MPI2SUPPORT`.
2023-01-26opencascade: add v7.7.0 (#35039)Wouter Deconinck1-1/+17
2023-01-26binutils: v2.30, 2.39, 2.40 (#35128)Harmen Stoppels2-19/+61
- Add `binutils +pgo` - Add dejagnu build dep and fix its deps - Default to -O3 -g0 when using gcc/clang to make binutils faster and smaller
2023-01-26Add package for serenity and its scine wrapper (#35072)Sebastian Ehlert3-0/+238
2023-01-26Setting LIBDIR to lib in rocm-smi-lib across all platform (#34805)renjithravindrankannath1-1/+5
2023-01-26py-poetry-core GIT_DIR fix (#35139)mtaylo121-2/+2
2023-01-26ports-of-call: add v1.4.1, deprecate old versions (#35151)Richard Berger1-9/+18
2023-01-25NVIDIA HPC SDK: add v23.1 (#35169)Filippo Spiga1-0/+14
2023-01-26p5-h5py: restrict python version based on import bugs (#35166)Seth R. Johnson1-0/+1
``` File ".../spack/var/spack/environments/scale-mpi/.spack-env/._view/4yiorsdd4pefrnwgrwlwt3yzo5i235il/lib/python3.10/site-packages/h5py/_hl/base.py", line 19, in <module> from collections import (Mapping, MutableMapping, KeysView, ImportError: cannot import name 'Mapping' from 'collections' (.../spack/var/spack/environments/scale-mpi/.spack-env/._view/4yiorsdd4pefrnwgrwlwt3yzo5i235il/lib/python3.10/collections/__init__.py) ``` Fixed in https://github.com/h5py/h5py/pull/1069 which was first merged in v2.9.
2023-01-26Update gftl, gftl-shared, fargparse, pfunit, yafyaml, pflogger (#35119)Matthew Thompson6-2/+21
2023-01-25trilinos@14: conflicts with cxxstd=14 (#35164)eugeneswalker1-0/+1
2023-01-25py-sphobjinv: add v2.3.1 (#35044)Adam J. Stewart1-4/+9
2023-01-25py-pytorch-lightning: add +extra variant (#35121)Adam J. Stewart17-16/+696
* py-pytorch-lightning: add +extra variant * Update dependencies * py-fsspec: add v2023.1.0
2023-01-25perl-math-symbolic: add 0.612 (#35145)Christopher Christofi1-0/+17
2023-01-25qperf: add verbs support (#35147)Michael Kuhn1-0/+4
2023-01-25py-cligj: add v0.7.2 (#35149)Adam J. Stewart1-6/+8
2023-01-25py-pycocotools: add v2.0.6 (#35150)Adam J. Stewart1-3/+6
2023-01-25py-scikit-learn: add v1.2.1 (#35152)Adam J. Stewart1-0/+1
2023-01-25spiner: add v1.6.0 (#35154)Richard Berger1-21/+35
2023-01-25amqp-cpp: added RabbitMQ C++ API (#35156)Loïc Pottier1-0/+39
Signed-off-by: Loïc Pottier <pottier1@llnl.gov>
2023-01-25Add Orca version 5.0.3-f.1 (#35157)Sebastian Ehlert1-2/+18
2023-01-25py-colorlover: new package with version 0.3.0 (#35144)Christopher Christofi1-0/+17
2023-01-25Add packages for scine modules (#34969)Sebastian Ehlert11-0/+585
* Add packages for scine modules - lbfgspp (dependency for scine-utilities) - scine-core - scine-utilities and py-scine-utilities (virtual) - scine-readuct and py-scine-readuct (virtual) - scine-sparrow and py-scine-sparrow (virtual) - scine-database and py-scine-database (virtual) - scine-molassembler and py-scine-molassembler (virtual) - scine-xtb and py-scine-xtb (virtual) - py-scine-chemoton - py-scine-puffin * Fix line-length for flake8 * Remove virtual dependencies * Update detection of boost, minor fixes in packages / dependencies * Correctly declare build-only dependencies, add git versions * Add sparrow dummy packages, fix dependencies * Rename latest version from develop to master * Restore original sparrow package * Also rename latest version for chemoton and puffin
2023-01-25py-flatten-dict: require poetry to build. (#35122)Matthias Wolf1-2/+2
* py-flatten-dict: require poetry to build. The sources seem to contain a bundled, auto-generated `setup.py`. Building with `pip` insist on using Poetry as mentioned in `pyproject.toml`, so require it as a build dependency. * Update var/spack/repos/builtin/packages/py-flatten-dict/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-flatten-dict/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-01-25py-lazy: add 1.4 and 1.5 (#35124)Erik Heeren1-0/+13
* py-lazy: add 1.4 and 1.5 * py-lazy: add url_for_version
2023-01-25Add package `py-continuum` (#35082)Thomas Bouvier2-0/+71
* Add package `py-continuum` * `py-continuum`: missing `py-pytest-mock` dependency * `py-continuum`: add missing python dependency * [@spackbot] updating style on behalf of thomas-bouvier * Patch to remove useless `prospector` package * Link to original PR Co-authored-by: thomas-bouvier <thomas-bouvier@users.noreply.github.com>
2023-01-25py-pyspark: new versions (#35129)Erik Heeren2-8/+29
* py-pyspark: new versions * py-py4j: new versions * py-py4j: more style * py-py4j: even more style * py-spark, py4j: review remarks