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2023-12-23py-pyomo: Update spec for newest major series (#41271)Miranda Mundt5-9/+180
* Add enum34, numdifftools, and updated pyomo packages * Syntax error * Apply black style * Trying to get around Python spec issue * All SHAs were somehow wrong * Change enum version * Change optional dependencies to be on run, not build * Add Pyomo 6.7.0 * Update SHA and version mismatch * Remove py-enum34 * Add three new packages to address comments * Fix linting errors; move casadi to py-casadi * Update license; add in dependency * Update setuptools version * Update class name to python class * Remove other boielerplate stuff * Update homepage addresses; update py-casadi
2023-12-23py-urllib3: add version 1.25.11 (#41756)Christopher Christofi1-0/+1
2023-12-23minimap2: Added option for paftools.js (#41765)Arne Becker1-0/+7
- Added an option for the Javascript paftools script - Added two slightly older versions
2023-12-23CUDNN: Add versions 8.8.x and 8.9.x. (#41790)Rémi Lacroix1-2/+44
NVIDIA changed the download URLs again so account for that.
2023-12-23py-apispec: add older version (#41798)Arne Becker1-0/+1
2023-12-23Revert "Tcl: add nmake system for Windows (#41759)" (#41842)Harmen Stoppels1-88/+62
This reverts commit ecdf3ff297eda60180253c43a19a303a8b5a8bfd.
2023-12-23Revert "update an everywhere-but-windows check to include freebsd (#41819)" ↵Harmen Stoppels1-1/+1
(#41841) This reverts commit a2dc11acd3d368e7639e924a4e1d11e09b0b2f72.
2023-12-22Revert "sqlite: add NMake build system for Windows (#41761)" (#41840)Harmen Stoppels1-71/+36
This reverts commit 94fc2314f163b1f8dcdf072c4b66afccff9c83b4.
2023-12-22damask: add version 3.0.0-alpha8 (#41444)Martin Diehl4-0/+23
* damask 3.0.0-alpha8 * ensuring correct Python versions for py-damask
2023-12-22py-lightning: add v2.1.3 (#41809)Adam J. Stewart1-1/+3
2023-12-22Fftx final ecp update (#41812)Patrick Broderick4-4/+8
* build(deps): bump actions/setup-python from 2.2.2 to 2.3.1 Bumps [actions/setup-python](https://github.com/actions/setup-python) from 2.2.2 to 2.3.1. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/dc73133d4da04e56a135ae2246682783cc7c7cb6...f38219332975fe8f9c04cca981d674bf22aea1d3) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump docker/build-push-action from 2.8.0 to 2.9.0 Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 2.8.0 to 2.9.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/1814d3dfb36d6f84174e61f4a4b05bd84089a4b9...7f9d37fa544684fb73bfe4835ed7214c255ce02b) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump actions/upload-artifact from 2 to 3 Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 2 to 3. - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](https://github.com/actions/upload-artifact/compare/v2...v3) --- updated-dependencies: - dependency-name: actions/upload-artifact dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump actions/download-artifact from 2 to 3 Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 2 to 3. - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](https://github.com/actions/download-artifact/compare/v2...v3) --- updated-dependencies: - dependency-name: actions/download-artifact dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump actions/setup-python from 2 to 3.1.2 Bumps [actions/setup-python](https://github.com/actions/setup-python) from 2 to 3.1.2. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/v2...98f2ad02fd48d057ee3b4d4f66525b231c3e52b6) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump codecov/codecov-action from 2.1.0 to 3.1.0 Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 2.1.0 to 3.1.0. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/master/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/f32b3a3741e1053eb607407145bc9619351dc93b...81cd2dc8148241f03f5839d295e000b8f761e378) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump actions/checkout from 2 to 3.0.2 Bumps [actions/checkout](https://github.com/actions/checkout) from 2 to 3.0.2. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](https://github.com/actions/checkout/compare/v2...2541b1294d2704b0964813337f33b291d3f8596b) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump docker/build-push-action from 2.10.0 to 4.0.0 Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 2.10.0 to 4.0.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/ac9327eae2b366085ac7f6a2d02df8aa8ead720a...3b5e8027fcad23fda98b2e3ac259d8d67585f671) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump docker/setup-buildx-action from 2.2.1 to 2.4.1 Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.2.1 to 2.4.1. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/8c0edbc76e98fa90f69d9a2c020dcb50019dc325...f03ac48505955848960e80bbb68046aa35c7b9e7) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * build(deps): bump docutils from 0.18.1 to 0.20.1 in /lib/spack/docs Bumps [docutils](https://docutils.sourceforge.io/) from 0.18.1 to 0.20.1. --- updated-dependencies: - dependency-name: docutils dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * Bump mypy from 1.5.0 to 1.5.1 in /lib/spack/docs Bumps [mypy](https://github.com/python/mypy) from 1.5.0 to 1.5.1. - [Commits](https://github.com/python/mypy/compare/v1.5.0...v1.5.1) --- updated-dependencies: - dependency-name: mypy dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> * Bump sphinx-rtd-theme from 1.2.2 to 1.3.0 in /lib/spack/docs Bumps [sphinx-rtd-theme](https://github.com/readthedocs/sphinx_rtd_theme) from 1.2.2 to 1.3.0. - [Changelog](https://github.com/readthedocs/sphinx_rtd_theme/blob/master/docs/changelog.rst) - [Commits](https://github.com/readthedocs/sphinx_rtd_theme/compare/1.2.2...1.3.0) --- updated-dependencies: - dependency-name: sphinx-rtd-theme dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * Bump actions/upload-artifact from 3.1.2 to 3.1.3 Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 3.1.2 to 3.1.3. - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](https://github.com/actions/upload-artifact/compare/0b7f8abb1508181956e8e162db84b466c27e18ce...a8a3f3ad30e3422c9c7b888a15615d19a852ae32) --- updated-dependencies: - dependency-name: actions/upload-artifact dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> * Bump docker/build-push-action from 4.1.1 to 5.0.0 Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4.1.1 to 5.0.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/2eb1c1961a95fc15694676618e422e8ba1d63825...0565240e2d4ab88bba5387d719585280857ece09) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump docker/setup-qemu-action from 2.2.0 to 3.0.0 Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action) from 2.2.0 to 3.0.0. - [Release notes](https://github.com/docker/setup-qemu-action/releases) - [Commits](https://github.com/docker/setup-qemu-action/compare/2b82ce82d56a2a04d2637cd93a637ae1b359c0a7...68827325e0b33c7199eb31dd4e31fbe9023e06e3) --- updated-dependencies: - dependency-name: docker/setup-qemu-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump docker/setup-buildx-action from 2.9.1 to 3.0.0 Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.9.1 to 3.0.0. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/4c0219f9ac95b02789c1075625400b2acbff50b1...f95db51fddba0c2d1ec667646a06c2ce06100226) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump actions/checkout from 3.5.3 to 4.1.0 Bumps [actions/checkout](https://github.com/actions/checkout) from 3.5.3 to 4.1.0. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](https://github.com/actions/checkout/compare/c85c95e3d7251135ab7dc9ce3241c5835cc595a9...8ade135a41bc03ea155e62e844d188df1ea18608) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump pytest from 7.4.0 to 7.4.2 in /lib/spack/docs Bumps [pytest](https://github.com/pytest-dev/pytest) from 7.4.0 to 7.4.2. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/7.4.0...7.4.2) --- updated-dependencies: - dependency-name: pytest dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> * Bump sphinx from 6.2.1 to 7.2.6 in /lib/spack/docs Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 6.2.1 to 7.2.6. - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst) - [Commits](https://github.com/sphinx-doc/sphinx/compare/v6.2.1...v7.2.6) --- updated-dependencies: - dependency-name: sphinx dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Update tarball and version info for Final ECP versions of FFTX/Spiral repos --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-12-22update an everywhere-but-windows check to include freebsd (#41819)Peter Scheibel1-1/+1
2023-12-22py-keras: add v3.0.2 (#41827)Adam J. Stewart1-2/+3
2023-12-22py-mypy: add v1.8.0 (#41831)Adam J. Stewart1-0/+2
2023-12-22openfoam: add version 2312 (#41828)Mark Olesen1-0/+1
2023-12-22Add PAPI 7.0.1 and 7.1.0 (#38443)Wileam Y. Phan3-1/+81
* Add PAPI 7.0.1 * Add comment about skipping PAPI 7.0.0 * Add patch to avoid adding Intel ifort/ifx flag on Cray ftn * Modify patch to include Cray-specific flags * Adjust recipe to always apply patch for 7.0.1 * Expand Cray compiler checks in patch * Forgot to update recipe * Adjust recipe so it looks for hipcc in the correct path * Revert "Adjust recipe so it looks for hipcc in the correct path" This reverts commit 0db3df4fe2874cea7d0e31fee1709246db668499. * Patch HIP_PATH to work with Spack-built HIP * Patch LDFLAGS with llvm-amdgpu path * Forgot the depends_on line * libomptarget only builds with clang * Try a self-consistent build of llvm-amdgpu * Try making llvm-amdgpu depend on llvm for llvmoffloadarch library * Update prereq to use rocm-openmp-extras instead * Refactor llvm-amdgpu to use a version dict * Fix typo * Hack to exclude older versions without matching rocm-openmp-extras * Add PAPI 7.1.0 * Revert changes to llvm-amdgpu * Fix PAPI 7.1.0 checksum
2023-12-22Remove deprecated versions from packages (#41031)Adam J. Stewart87-3424/+100
For now, this only includes packages that I personally maintain. Notable removals: * Anaconda 2 * Catalyst * Ancient numpy/scipy * Ancient PyTorch * Ancient Bazel/TF
2023-12-22llvm: fix llvm@14 build with apple-clang-15 (#40191)Laurent Aphecetche2-0/+33
* llvm: fix llvm@14 build with apple-clang-15 * fix formatting --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-12-22costa: add missing dependency (#41829)Simon Pintarelli1-0/+1
2023-12-22GDAL: add v3.8.2 (#41795)Adam J. Stewart1-0/+1
2023-12-22ReSolve: Add version 0.99.1 (#41802)pelesh1-1/+6
* ReSolve: Add version 0.99.1 * [@spackbot] updating style on behalf of pelesh --------- Co-authored-by: pelesh <pelesh@users.noreply.github.com>
2023-12-22kealib: add version 1.5.3 (#41804)Sam Gillingham1-1/+2
2023-12-21sqlite: add NMake build system for Windows (#41761)John W. Parent1-36/+71
2023-12-21Tcl: add nmake system for Windows (#41759)John W. Parent1-62/+88
2023-12-21Compilers can inject first order rules into the solverMassimiliano Culpo7-70/+103
* Restore PackageBase class, and modify only ASP This prevents a noticeable slowdown in concretization due to the number of directives involved. * Fix issue with 'clang' being preferred to 'gcc', due to runtime version weights * Constraints on runtimes are declared by compilers The declaration of available runtime versions, and of their compatibility constraints are in the associated compiler class. Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-12-21gcc-runtime: add separate package for gcc runtime libsHarmen Stoppels1-0/+222
The gcc-runtime package adds a separate node for gcc's dynamic runtime libraries. This should help with: 1. binary caches where rpaths for compiler support libs cannot be relocated because the compiler is missing on the target system 2. creating "minimal" container images The package is versioned like `gcc` (in principle it could be unversioned, but Spack doesn't always guarantee not mixing compilers)
2023-12-21intel-oneapi-compilers and intel-oneapi-ccl: added new version to packages ↵Andrey Perestoronin2-2/+12
(#41807) * added new packages * compiler package * fix link in ccl * fix another links in ccl
2023-12-20Add missing import to packages (#41791)Massimiliano Culpo4-5/+8
2023-12-20Fujitsu packages: require %fj (#41755)Massimiliano Culpo3-32/+4
These packages were written before the "requires" directive, and so they are conflicting with all compilers but Fujitsu to express they _require_ `%fj`
2023-12-20Add detection tests for XL compilers (#41743)Massimiliano Culpo2-0/+29
2023-12-19GDAL: Ensure a spack libproj is used instead of a system libproj (#41785)Chris Marsh1-0/+8
* Ensure a spack libproj is used instead of a system libproj when libproj < 8. spack/spack/issues/41299 * Fix style as per ci-bot * Fix style as per ci-bot * Ensure 3.5:3.8. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-12-19intel-oneapi-compilers 2024.0.2 (#41778)Andrey Perestoronin2-1/+12
* new compiler packages * Fix ifort version number --------- Co-authored-by: Robert Cohn <rscohn2@gmail.com>
2023-12-19Require target=x86_64 for some packages (#41633)Annop Wongwathanarat4-0/+6
This resolves issue #41148
2023-12-19Skip 'icc.patch' in var/spack/repos/builtin/packages/py-gevent/package.py ↵Dom Heinzeller1-1/+1
for py-gevent@23.7.0+ (#41568)
2023-12-19Add an audit to prevent virtual packages with variants specified (#41747)Massimiliano Culpo11-15/+99
Currently, a virtual spec is composed of just a name and a version. When a virtual spec contains other components, such as variants, Spack won't emit warnings or errors but will silently drop them - which is unexpected by users.
2023-12-19adios2: fix build failure in 2.7.1 (#41753)Ben Wibking2-0/+27
2023-12-19umpire: backport -fcompare-debug-second flag removal (#41506)Mikael Simberg1-0/+7
2023-12-19ffmpeg: mostly build fixes (#41050)Martin Aumüller1-2/+21
2023-12-19openblas: add patches to build with clang (#39138)Aiden Grossman3-0/+50
2023-12-19removing deprecated: recipes tower-agent and tower-cli, as nf- prefixed ↵Dr Marco Claudio De La Pierre2-109/+0
recipes available (#41576) Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@seqera.io>
2023-12-19lbann: relax the requirement on protobuf (#41591)Brian Van Essen1-1/+1
2023-12-19easi: specify better the impalajit dependency (#41637)Thomas-Ulrich1-2/+2
2023-12-19pcre: ensure consistency between autotools and cmake builds (#41644)Wouter Deconinck1-16/+30
Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2023-12-19legion: do not set HIP_PATH env variable (#41660)Richard Berger2-5/+4
* legion: do not set HIP_PATH env variable * flecsi: workaround Legion CMake for +rocm
2023-12-19openmpi: allow external libevent in general case (#41686)Howard Pritchard1-1/+2
add a internal-libevent variant to add an out. related to #41549 Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-12-19tau : v2.33.1 and later requires otf2 v3 (#41691)wspear1-1/+2
2023-12-19legion: inject correct mpicc to embedded GASnet slingshot11 config (#41701)Richard Berger1-0/+9
2023-12-19ufs-weather-model: add build dependency (#41724)Tom Payerle1-0/+1
2023-12-19PyTorch: update ecosystem (#41713)Adam J. Stewart4-0/+7
2023-12-19samtools: add v1.19 (#41634)James Beal3-0/+11
Co-authored-by: James Beal <jb23@sanger.ac.uk>
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-11-25 06:05:03 +0000