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2018-03-20package_hash: add code to generate a hash for a package filePeter Scheibel5-0/+66
This will be included in the full hash of packages.
2018-03-20Add latest version of py-setuptools (#7523)Adam J. Stewart1-11/+23
2018-03-20Add DSDP package (#7526)Adam J. Stewart2-0/+87
2018-03-19pocl: fix spec (#7461)Axel Huebl1-9/+8
It seems there has been a change in concretization that resulted in a request for a llvm latest (5.0.1) while not satisfying the later more precise request for a version. Remove the first line and only rely on the last.
2018-03-19picard: Add version 2.18.0 (#7528)Eric1-0/+1
2018-03-19Add latest version of SuiteSparse (#7525)Adam J. Stewart1-1/+2
2018-03-19python: dbm module + version 3.6.4 (#7520)Massimiliano Culpo1-0/+4
A build of python@3.X had the following in the logs: ``` The necessary bits to build these optional modules were not found: _dbm _gdbm _tkinter ``` As Tkinter is already a variant, we adopt the same strategy for dbm.
2018-03-19Add latest version of py-six (#7524)Adam J. Stewart1-1/+2
2018-03-19Add latest version of py-packaging (#7522)Adam J. Stewart1-1/+2
2018-03-19Add latest version of GLPK (#7521)Adam J. Stewart1-2/+3
2018-03-19modern-wheel: new package (#7514)Federico Ficarelli1-0/+64
#Fix imports
2018-03-19Add latest version of libjpeg-turbo (#7518)Adam J. Stewart1-1/+2
2018-03-19Add latest version of libjpeg (#7517)Adam J. Stewart1-1/+7
2018-03-19Add latest version of libpng (#7516)Adam J. Stewart1-1/+7
2018-03-19Add latest version of nasm (#7515)Adam J. Stewart1-2/+6
2018-03-19glib: updated package and fixed issues with dtrace (#7493)Massimiliano Culpo1-11/+54
fixes #6965 closes #6968
2018-03-18Update the patches to work with bazel 0.9.0 (#7013)Jimmy Tang3-2/+163
Some code got moved around so the patches needed to be updated
2018-03-17LIBXSMM 1.9 (#7495)Hans Pabst1-1/+2
2018-03-17gmp: add oldish version 5.1.3 with checksum (#7510)jthies1-0/+1
2018-03-17py-multiqc: Add version 1.5 (#7506)Eric1-0/+1
2018-03-17py-performance: added package (#7500)Massimiliano Culpo2-0/+83
2018-03-17hwloc: constrain dependency on numactl (#7509)Massimiliano Culpo1-1/+1
fixes #7505
2018-03-15hwloc: updated package (#7483)Massimiliano Culpo2-25/+51
This includes: * Added latest available versions (1.11.9, 2.0.0) * Added variants to enable graphical output from lstopo * Enabled build of the bundled netloc package if @2.0.0: * Added dependency from numactl if @:1.11.9 * Added a constraint to avoid using hwloc@2.0.0 with openmpi
2018-03-14Added Tagged Release of ExaMiniMD (#7485)Robert Pavel1-2/+2
2018-03-14cube: Fix qt detection (#7242)Michael Kuhn2-0/+26
cube's configure only recognizes qt versions with single digit version components and breaks with qt 5.10. Patch the configure files directly to avoid having to regenerate them.
2018-03-14phylip: new version (#7467)Levi Baber1-0/+1
2018-03-14postgresql: add newest version 10.3 (#7455)Sinan1-0/+1
2018-03-14Fix extends('tcl') environment (#7473)Federico Ficarelli1-5/+19
2018-03-14Xterm: Fix URL (#7476)Matthias Diener1-1/+1
2018-03-14Provide new package: mscgen. (#7477)Kelly (KT) Thompson1-0/+42
Mscgen is a small program that parses Message Sequence Chart descriptions and produces PNG, SVG, EPS or server side image maps (ismaps) as the output. See http://www.mcternan.me.uk/mscgen/
2018-03-13r-tfbstools: new package (#7243)Yifan Zhu1-0/+68
2018-03-13llvm 6.0.0 released as stable (#7459)Stephen McDowell1-0/+16
Relase notes: http://releases.llvm.org/6.0.0/docs/ReleaseNotes.html
2018-03-13add an option to build tbb statically (#7407)Cyrus Harrison1-1/+13
2018-03-13Fix dependency conflict in FEniCS. (#7404)f-sim1-1/+1
2018-03-13Treat tcl as extendable (#7410)Federico Ficarelli2-3/+45
* Make tcl package extendable * Let tk extend tcl * Fix environment for Tcl extensions
2018-03-12arpack-ng: add develop (#7458)Denis Davydov1-0/+1
2018-03-10astral: needs zip (#7443)Levi Baber1-0/+1
2018-03-09Fix bug in lua package instroduced by PR #7434 (#7450)Patrick Gartung1-1/+1
Fixes issue #7449
2018-03-09Augustus hash (#7447)Levi Baber1-6/+16
* augustus: 3.3 package hash changed * augustus: bamtools libraries now seem to be in lib64 * augustus: fix lib problem with older bamtools
2018-03-09new package: tcptrace (#6993)sknigh3-0/+99
Also added missing deps for libpcap: bison and flex
2018-03-09new package: cistem (#7438)Levi Baber1-0/+40
2018-03-09new package: py-bcbio-gff (#7129)Eric1-0/+39
2018-03-09new package: deconseq-standalone (#7290)Eric1-0/+60
2018-03-09Boost: More Bintray (#7389)Axel Huebl1-2/+4
There are two additional releases moved to bintray. Change to bintray for 1.64 and 1.65 as well since SF downloads are too instable.
2018-03-09cmake: new version (#7429)Federico Ficarelli1-0/+1
2018-03-09r-cner: new package (#7228)Yifan Zhu2-0/+59
2018-03-08lua package: add lib64 to LUA_PATH and LUA_CPATH (#7434)Patrick Gartung1-0/+6
This is needed when using system lua on RHEL and clones where lua is installed in /usr/lib64. Note that the path entry for lua in packages.yaml should specify the major/minor version of lua (since this is used to calculate the lua lib directory)
2018-03-08json-c: Update to 0.13.1 (#7419)Michael Kuhn1-0/+7
* json-c: Update to 0.13.1 0.12.1 does not compile with GCC 7. * json-c: Add patch to make 0.12.1 build with gcc 7
2018-03-08Added new package: ghost (#7362)jthies1-0/+87
2018-03-08hoomd-blue version bump and compiler updated (#7021)Brock Palen1-3/+7
updated hoomd-blue to latest tagged release in repo. This version also supports newer gcc6 compilers, so added constraint for older version to avoid breaking existing installs.