Age | Commit message (Collapse) | Author | Files | Lines |
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* create qwtpolar package
* patch config files so that qwtpolar successfully builds
* make flake8 happy
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* Add preCICE xSDK support
* Cleanup generation of cmake arguments
* Generalize numpy include
* Fix python spec
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Fix numpy spec
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* Port py-poster to Python 3
* Forgot the patch
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* libconfig: add version 1.7.1
* move 1.7.1 above 1.6, latest version is preferred
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```
5 errors found in build log:
609 CXX mbpart.o
610 CXX quality.o
611 CXX umr.o
612 CXX merge.o
613 CXX parread.o
614 mbpart.cpp: In function 'int main(int, char**)':
>> 615 mbpart.cpp:494:19: error: no match for 'operator<<' (operand types
are 'std::ostream' {aka 'std::basic_ostream<char>'} and 'std::ostri
ngstream' {aka 'std::__cxx11::basic_ostringstream<char>'})
616 std::cerr << tmp_output_file << " : failed to write file."
<< std::endl;
617 ~~~~~~~~~~^~~~~~~~~~~~~~~~~~
618 mbpart.cpp:494:19: note: candidate: 'operator<<(int, int)' <built-i
n>
619 mbpart.cpp:494:19: note: no known conversion for argument 2 from
'std::ostringstream' {aka 'std::__cxx11::basic_ostringstream<char>'
} to 'int'
620 In file included from /software/user_tools/centos-7.2.1511/cades-ns
ed-spack/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-8.2.0-uc6sbum
ioobdbkw4rwfyn2givi4nyvwq/include/c++/8.2.0/iterator:64,
621 from /software/user_tools/centos-7.2.1511/cades-ns
ed-spack/var/spack/stage/moab-4.9.2-77uuzmj4ofb7z7vz6m25sftyks7p5do
7/spack-src/src/moab/Range.hpp:167,
...
886 /software/user_tools/centos-7.2.1511/cades-nsed-spack/opt/spack/lin
ux-centos7-x86_64/gcc-4.8.5/gcc-8.2.0-uc6sbumioobdbkw4rwfyn2givi4ny
vwq/include/c++/8.2.0/ostream:682:5: note: candidate: 'template<cla
ss _Ostream, class _Tp> typename std::enable_if<std::__and_<std::__
not_<std::is_lvalue_reference<_Tp> >, std::__is_convertible_to_basi
c_ostream<_Ostream>, std::__is_insertable<typename std::__is_conver
tible_to_basic_ostream<_Tp>::__ostream_type, const _Tp&, void> >::v
alue, typename std::__is_convertible_to_basic_ostream<_Tp>::__ostre
am_type>::type std::operator<<(_Ostream&&, const _Tp&)'
887 operator<<(_Ostream&& __os, const _Tp& __x)
888 ^~~~~~~~
889 /software/user_tools/centos-7.2.1511/cades-nsed-spack/opt/spack/lin
ux-centos7-x86_64/gcc-4.8.5/gcc-8.2.0-uc6sbumioobdbkw4rwfyn2givi4ny
vwq/include/c++/8.2.0/ostream:682:5: note: template argument dedu
ction/substitution failed:
890 /software/user_tools/centos-7.2.1511/cades-nsed-spack/opt/spack/lin
ux-centos7-x86_64/gcc-4.8.5/gcc-8.2.0-uc6sbumioobdbkw4rwfyn2givi4ny
vwq/include/c++/8.2.0/ostream: In substitution of 'template<class _
Ostream, class _Tp> typename std::enable_if<std::__and_<std::__not_
<std::is_lvalue_reference<_Tp> >, std::__is_convertible_to_basic_os
tream<_Ostream>, std::__is_insertable<typename std::__is_convertibl
e_to_basic_ostream<_Tp>::__ostream_type, const _Tp&, void> >::value
, typename std::__is_convertible_to_basic_ostream<_Tp>::__ostream_t
ype>::type std::operator<<(_Ostream&&, const _Tp&) [with _Ostream =
std::basic_ostream<char>&; _Tp = std::__cxx11::basic_ostringstream
<char>]':
891 mbpart.cpp:494:22: required from here
>> 892 /software/user_tools/centos-7.2.1511/cades-nsed-spack/opt/spack/lin
ux-centos7-x86_64/gcc-4.8.5/gcc-8.2.0-uc6sbumioobdbkw4rwfyn2givi4ny
vwq/include/c++/8.2.0/ostream:682:5: error: no type named 'type' in
'struct std::enable_if<false, std::basic_ostream<char>&>'
893 CXXLD mbdepth
894 CXXLD hexmodops
>> 895 make[2]: *** [mbpart.o] Error 1
896 make[2]: *** Waiting for unfinished jobs....
897 make[2]: Leaving directory `/localscratch/tmp/s3j-spack/spack-stage
/spack-stage-NT13kT/spack-src/tools'
>> 898 make[1]: *** [all-recursive] Error 1
899 make[1]: Leaving directory `/localscratch/tmp/s3j-spack/spack-stage
/spack-stage-NT13kT/spack-src/tools'
>> 900 make: *** [all-recursive] Error 1
```
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* SL-637
* https://redmine.gromacs.org/issues/2927
* tested with cmake 3.14.4 and 3.15.1
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* blaze: added version 3.5
* blaze: added access to bleeding edge
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This updates the flatcc package to have the latest version.
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1. add dependency for libxext2.
2. SSEMATH is off is aarch64.
3. reformat comment for flake8.
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* Plink 1.9 Beta 6.10 added
* Typo Fix
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* newpackage/tippecanoe
* make flake8 happy
* add "r" for raw text
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* hunspell: write autoreconf method to triage error
This commit fixes the error described in GitHub issue
`AutotoolsPackage` class attempts to call `libtoolize`, which doesn't
exist on macOS systems that externally install `libtool` in Spack via
Homebrew -- Homebrew installzes GNU libtoolize as `glibtoolize`.
The fix is to call `autoreconf` only, and GitHub pull request #12344
makes this change in
AutotoolsPackage (https://github.com/spack/spack/pull/12344). However,
while waiting for that pull request to be merged, overriding the
`autoreconf` method achieves the same result for a self-contained
fix. This self-contained fix is necessary to fix a dependency bug in
the `hunspell` package.
* hunspell: add missing gettext dependency
* hunspell: add version 1.7.0
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* Fixed broken iegenlib package
* [IEGenLib] fixed for style
* [IEGenLib] style fixes
* [IEGenLib] removed CMAKE_BUILD_TYPE option from config_args
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* add new package cromwell
* fix flake8 errors, add cromwell-womtool package
* change name of cromwell to cromwell-server
* renamed cromwell-server to just cromwell
* update description to what is in the project docs
* fixing format call for python2.6 compatibility
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* new package: aria2
* tidy up
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* Add comment that 1.0.1 versions are no longer supported
* Add comment that 1.0.2 versions are only supported up to
December 2019
* Add versions 1.0.2s, 1.0.2r, and 1.0.2p
* Add versions 1.1.0k, 1.1.0j, and 1.1.0i
* Add version 1.1.1c
* Add comment that 1.1.0 versions are only supported up to
September 2019
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* Making STK package in Trilinos more general.
* Remove comment about seacas exodus settings.
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* ncbi-toolkit: fix compiler+version restriction (spack/spack#12276)
* ncbi-toolkit: update urls for current and archive releases
* ncbi-toolkit: add compatibility for boost@1.69:
* ncbi-toolkit: add compatibility for boost@1.70:
* ENH: Add debug variant to significantly reduce install size
* ncbi-toolkit: add archive url for 22_0_0 (spack/spack#12278)
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* Remove unnecessary setting with buggy prefix
Spack adds installation prefix by default and the "self." is missing
* Add version 19.8.1 of PLASMA
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Resolves #11932.
Move the PIC flags from CFLAGS on the configure line to the spack
compiler wrapper for ncurses. The problem with the configure line for
autotools is that specifying CFLAGS sets the entire flags, thus
deleting the flags that configure would add itself.
By default, if CFLAGS is unspecified, then configure picks a sensible
default of `-g -O2`. But adding `-fPIC` erases these and it ends up
building unoptimized.
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