summaryrefslogtreecommitdiff
path: root/var
AgeCommit message (Collapse)AuthorFilesLines
2019-08-07Generalize STK package settings in Trilinos (#11917)Jon Rood1-21/+10
* Making STK package in Trilinos more general. * Remove comment about seacas exodus settings.
2019-08-07ncbi-toolkit: add version 22_0_0 (#12278)Pariksheet Nanda1-7/+36
* ncbi-toolkit: fix compiler+version restriction (spack/spack#12276) * ncbi-toolkit: update urls for current and archive releases * ncbi-toolkit: add compatibility for boost@1.69: * ncbi-toolkit: add compatibility for boost@1.70: * ENH: Add debug variant to significantly reduce install size * ncbi-toolkit: add archive url for 22_0_0 (spack/spack#12278)
2019-08-07Version 19.8.1 of PLASMA (#12299)Piotr Luszczek1-2/+1
* Remove unnecessary setting with buggy prefix Spack adds installation prefix by default and the "self." is missing * Add version 19.8.1 of PLASMA
2019-08-06new package: py-exodus (#12291)Daryl W. Grunau1-0/+20
2019-08-06ncurses: fix pic and opt flags (#12272)Mark W. Krentel1-2/+6
Resolves #11932. Move the PIC flags from CFLAGS on the configure line to the spack compiler wrapper for ncurses. The problem with the configure line for autotools is that specifying CFLAGS sets the entire flags, thus deleting the flags that configure would add itself. By default, if CFLAGS is unspecified, then configure picks a sensible default of `-g -O2`. But adding `-fPIC` erases these and it ends up building unoptimized.
2019-08-06pumi: new version 2.2.1 (#12282)Cameron Smith1-0/+1
2019-08-06tests: explain and test dependency flattening routines (#11993)Tamara Dahlgren1-0/+19
- Add comments to explain that `install_dependency_symlinks` and `flatten_dependencies` are actually used. - Add a test that exercises the routines.
2019-08-06graphviz package: add MacOS fixes and quartz support (#11128)Seth R. Johnson2-129/+112
* Add patch to detect newer versions of MacOS and to fix a typo in configure.ac (AM_LIBTOOLSFLAGS should be AM_LIBTOOLFLAGS) * Remove variant declarations for unsupported languages * Add support for quartz on MacOS * Add optional X Window support * Specifically build against qt@4 when building QT support * Point to appropriate C++ standard libraries when building with Clang on MacOS * Disable parallel build (for all platforms) * Increase verbosity of configure script by adding --disable-silent-rules
2019-08-06Overhaul numpy package (#12170)Adam J. Stewart6-134/+544
* Add numpy 1.17.0 * Overhaul numpy package * Flake8 fixes * Undefined reference fix * HeaderList and LibraryList need an arg * veclibfort has no headers * Add patch for older versions of py-numpy * Remove py-meep hack from py-numpy package * libflame: always add max arg hack flag * Fix build with GCC 4.8 * Compiler flags come from self.compiler * Only apply -std=c99 to cflags * Try to fix libflame package * Fix ATLAS build on macOS * --force-clang flag added in 3.10.3
2019-08-06fltk: fix about variable types (#12292)t-karatsu3-0/+36
* fltk: fix about variable types
2019-08-05Packages/musl (#12288)Daryl W. Grunau1-1/+20
* bump eospac version * Revert "bump eospac version" This reverts commit 835b1f822d8c083f6ab9eb17222c00409e8eb3da. * fix-up musl-gcc wrapper script * address adamjstewart's comments
2019-08-05c-blosc package: Add -std=gnu99 flag for gcc (#11959)Toyohisa Kameyama2-0/+24
When building with GCC, c-blosc requires the -std=gnu99 flag. Before this patch, the build would only add -std=gnu99 for GCC when building on specific architectures; this adds -std=gnu99 in all cases when using GCC.
2019-08-05Move new packages from tutorial to builtin (#12289)Adam J. Stewart8-1/+1
* Move new packages from tutorial to builtin * Remove unicode character from docstring
2019-08-05Balay/amrex 19.08 (#12287)Satish Balay1-1/+2
* amrex: add version 19.08 * amrex: update sundials dependency for @19.08
2019-08-05openPMD-api: pre-load depend libs (#12279)Axel Huebl1-0/+23
When loading `openpmd-api` as a lib to build outside of spack or to build depending spack packages, the "CMake-PUBLIC" header-only library MPark.Variant must be available. Also, the `*Config.cmake` package must be able to find dependent libs if used.
2019-08-04Add version 19.8.0 of PLASMA (#12275)Satish Balay1-0/+1
2019-08-04Add version 2.5.1 of MAGMA released today (#12274)Satish Balay1-1/+1
2019-08-04ginkgo: add maintainers (#12273)Satish Balay1-0/+2
2019-08-04new package: py-backports-tempfile (#12261)Sinan1-0/+20
* new package: py-backports-tempfile * Update var/spack/repos/builtin/packages/py-backports-tempfile/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * remove rc version * fix single quote
2019-08-03package/py-apipkg add new version, add sha256 sums (#12260)Sinan1-2/+4
* add new version, add sha256 sums * Update var/spack/repos/builtin/packages/py-apipkg/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * add python dependencies
2019-08-03new package: py-backports-weakref (#12262)Sinan1-0/+17
* new package: py-backports-weakref * use the version at pypi.org
2019-08-03new package: py-usgs (#12263)Sinan1-0/+22
* new package: py-usgs * Update var/spack/repos/builtin/packages/py-usgs/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-usgs/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-08-03new package: py-requests-futures (#12264)Sinan1-0/+19
* new package: py-requests-futures * Update var/spack/repos/builtin/packages/py-requests-futures/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-08-03new package: py-colorlog (#12265)Sinan1-0/+18
* new package: py-colorlog * improve styling. * remove spaces
2019-08-03new package: py-colorpy (#12266)Sinan1-0/+23
* new package: py-colorpy * remove incorrect dependency
2019-08-03Add py-uritemplate package (#12259)Adam J. Stewart1-0/+17
2019-08-02Add py-earthengine-api package (#12253)Adam J. Stewart1-0/+23
2019-08-02Add py-google-api-python-client package (#12254)Adam J. Stewart1-0/+24
2019-08-02Add py-google-auth-httplib2 package (#12255)Adam J. Stewart1-0/+19
2019-08-02Add py-google-auth package (#12256)Adam J. Stewart1-0/+23
2019-08-02Add py-httplib2 package (#12257)Adam J. Stewart1-0/+17
2019-08-02Add py-pyasn1-modules package (#12258)Adam J. Stewart1-0/+21
2019-08-02Add py-cachetools package (#12252)Adam J. Stewart1-0/+19
2019-08-02Add py-pyasn1 0.4.6 (#12251)Adam J. Stewart1-3/+6
2019-08-02swig: add latest version, 4.0.0 (#12243)Reinhard Prix1-0/+1
2019-08-02slepc: update python dependencies to be in sync with petsc (#12250)Satish Balay1-1/+3
2019-08-02packages/musl (#12247)Daryl W. Grunau1-0/+43
* new musl package
2019-08-02Set default resource manager to 'none' (#12092)Marc-Andre Hermanns1-6/+7
2019-08-02minimap2, py-mappy: change dependency and build on ARM (#12127)Toyohisa Kameyama2-22/+15
* minimap2: remove py-mappy dependency and build on ARM py-mappy: Change URL and new version. * merge py-mappy to minimap2. * 1. add type in depends_on. 2. remove unneeded which.
2019-08-02Resolves #11487. (#12136)Chris Green3-2/+260
* Incorporate as a patch upstream commit https://github.com/ericniebler/range-v3/commit/0c20dbf05973368339aeae0c4e106560e2dcf76b#diff-acb9169b4ccbac494ced5140d285a015 resolving problems with `-Wno-...` options not being understood by GCC. * Incorporate as a patch upstream PR https://github.com/ericniebler/range-v3/pull/1202 fixing upstream issue https://github.com/ericniebler/range-v3/issues/1196. * Compile tests only if we actually want to run them. * Optionally compile documentation with a `+doc` variant. * Add `+examples` and `+perf` variants to avoid unnecessary compilation of components usually not required for install. * Add conditional build-only dependency on Boost when appropriate. * Install docs, examples and performance tests if built (not part of upstream build instructions). * Add @chissg as a maintainer.
2019-08-02py-flye: change to build ARM. (#12176)Toyohisa Kameyama1-0/+5
2019-08-02FAODEL: Add 1.1906.1 (#12180)Todd Kordenbrock1-16/+14
2019-08-02vdt: add simd variant (#12188)Toyohisa Kameyama1-0/+62
1. add simd variant and check target. 2. build on source directory before 0.3.8.
2019-08-02py-mpi4py: Added build argument for mpicc path (#12191)TiffanyAnn1-0/+3
* added build arguments to resolve error with Cray-MPICH * fixed indentation
2019-08-02ermod: new package (#12192)Hironori-Yamaji1-0/+28
2019-08-02parsimonator: Enable build on non x86_64 hosts. (#12194)Toyohisa Kameyama2-3/+89
2019-08-02Update c-blosc and fix building tests with icc (#12204)Glenn Johnson2-4/+13
- Update c-blosc to 1.17.0 - Add patch to build test_forksafe for versions 1.15.0 through 1.17.0 when compiled with the Intel compiler. - Remove code that turned off building the test with the Intel compiler
2019-08-02raxml: compile n non-x86 hosts. (#12208)Toyohisa Kameyama2-48/+343
1. xmmintrrin.h is included x86 only. 2. Add makefiles for non-x86 hosts. 3. mpicc in Makefiles is replaced spacks mpi compile command. 4. variant check is rewite with satisfies.
2019-08-02dialign-tx: build on ARM. (#12210)Toyohisa Kameyama1-0/+2
2019-08-02added a package butterflypack (#12222)liuyangzhuan1-0/+59
* added a package butterflypack * remove one line in the python script
generated by cgit v1.2.3-60-g2f50 (git 2.42.0) at 2024-07-17 02:24:03 +0000