| Age | Commit message (Collapse) | Author | Files | Lines | |
|---|---|---|---|---|---|
| 2017-10-27 | r-oo: Create new package. (#5962) | lingnanyuan | 1 | -0/+43 | |
| 2017-10-27 | r-utils: Create new package. (#5964) | lingnanyuan | 1 | -0/+38 | |
| 2017-10-27 | r-pfam-db: Create new package. (#5965) | lingnanyuan | 1 | -0/+38 | |
| 2017-10-27 | r-oligoclasses: Create new package. (#5966) | lingnanyuan | 1 | -0/+50 | |
| 2017-10-27 | r-interactivedisplaybase: created new package (#5967) | Yifan Zhu | 1 | -0/+41 | |
| 2017-10-27 | r-annotationforge: Create new package. (#5968) | lingnanyuan | 1 | -0/+46 | |
| 2017-10-27 | r-gostats: Create new package. (#5969) | lingnanyuan | 1 | -0/+46 | |
| 2017-10-27 | r-mcmcglmm: new package (#5970) | Audrey Thoma | 2 | -0/+77 | |
| 2017-10-27 | r-annotationhub: created new package (#5972) | Yifan Zhu | 1 | -0/+51 | |
| 2017-10-27 | gnuplot: add 5.2.0 and 5.0.7 (#5979) | Denis Davydov | 1 | -0/+2 | |
| 2017-10-27 | r-deseq2: Create new package. (#5981) | lingnanyuan | 1 | -0/+53 | |
| 2017-10-27 | r-agdex: Create new package. (#5983) | lingnanyuan | 1 | -0/+39 | |
| 2017-10-27 | r-agilp: Create new package. (#5984) | lingnanyuan | 1 | -0/+36 | |
| 2017-10-27 | r-aims: Create new package. (#5987) | lingnanyuan | 1 | -0/+42 | |
| 2017-10-27 | Add info for go@1.9.2 (#5989) | George Hartzell | 1 | -0/+1 | |
| The go team released 1.9.2 which includes fixes for some things that 1.9.1 broke: > ... include fixes to the compiler, linker, runtime, documentation, go command, and the crypto/x509, database/sql, log, and net/smtp packages. They include a fix to a bug introduced in Go 1.9.1 and Go 1.8.4 that broke "go get" of non-Git repositories under certain conditions. | |||||
| 2017-10-27 | r-annotationfilter: created new package (#5995) | Yifan Zhu | 1 | -0/+42 | |
| 2017-10-27 | r-protgenerics: created new package (#5998) | Yifan Zhu | 1 | -0/+37 | |
| 2017-10-26 | ecp-proxy-apps: add dependencies (#5999) | Abhinav Bhatele | 1 | -1/+6 | |
| 2017-10-26 | miniamr: bump to v1.4.0 (#5975) | Christoph Junghans | 1 | -12/+8 | |
| 2017-10-26 | Exodus: skip the -G "Unix Makefiles" part (#5906) | Ondřej Čertík | 2 | -29/+16 | |
| * Exodus: skip the -G "Unix Makefiles" part The problem is that spack passes -G "Unix Makefiles" into cmake, which normally works. But in the Exodus package, it is being passed into a bash wrapper script. In there, the $@ then loses the information about "Unix Makefiles" being just one argument, and in effect passes -G Unix Makefiles into the cmake (without quotes), and so cmake only sees -G Unix, and then fails. This is a known problem with bash with no simple solutions. As a workaround, this patch skips the first two arguments, i.e., -G and "Unix Makefiles". This makes it work. Fixes #5895. * Port exodusii to cmake The cmake options were taken from the cmake-exodus bash script and ported to spack directly. * Use variant forwarding to forward the 'mpi' Now instead of spack install exodusii~mpi^netcdf~mpi^hdf5~mpi one can just use spack install exodusii~mpi | |||||
| 2017-10-26 | minife: version bump to v2.1.0 (#5985) | Christoph Junghans | 1 | -21/+6 | |
| 2017-10-26 | Laghos: new package (#5956) | Abhinav Bhatele | 2 | -0/+64 | |
| 2017-10-26 | sw4lite: fix build errors and add variants (#5944) | Abhinav Bhatele | 1 | -4/+42 | |
| * sw4lite: fix build errors and add variants * sw4lite: change linking against blas and lapack * change order of blas and lapack * satisfy flake8 requirements * Update package.py | |||||
| 2017-10-26 | Customization of the Paraview module file to its nonstandard directory ↵ | Jon Rood | 1 | -0/+12 | |
| structure (#5799) * Add the custom paraview lib directory structure to the library paths in the paraview module file. * Fixing flake8 issues. * Checking if lib64 exists for paraview module file generation, else use lib. * Fixing more flake8 problems I introduced. | |||||
| 2017-10-26 | flang: fixed llvm dep (#5948) | Christoph Junghans | 1 | -3/+9 | |
| * flang: fixed llvm dep * add support for llvm-5 * Update package.py * Update package.py | |||||
| 2017-10-26 | Add option to install clang python bindings to llvm (#5774) | Johann Klähn | 1 | -0/+7 | |
| 2017-10-25 | Make clang use libc++ by default (#5943) | Ondřej Čertík | 1 | -1/+4 | |
| Since LLVM 3.9 Clang can use the libc++ library by default using the CLANG_DEFAULT_CXX_STDLIB cmake configuration variable, without having to specify the -stdlib=libc++ option on the clang++ command line. This commit makes clang++ use libc++ by default for LLVM 3.9 and later if the libcxx variant is on. Fixes #5942. | |||||
| 2017-10-25 | adding miniTri miniapp (#5935) | mmwolf | 1 | -0/+63 | |
| 2017-10-25 | boost: remove duplicate patch (#5934) | Omar Padron | 2 | -55/+2 | |
| 2017-10-25 | tweak opencv version (#5623) | Jimmy Tang | 1 | -1/+1 | |
| 2017-10-25 | Update for 'netcdf'. (#5819) | Sergey Kosukhin | 1 | -82/+135 | |
| 2017-10-25 | delly2: new package (#5820) | Audrey Thoma | 1 | -0/+65 | |
| 2017-10-25 | Zlib gets a 50-60% performance win when compiled with -O2 (#5838) | David Hows | 1 | -0/+4 | |
| Chasing a performance regression has lead me to this change, going from default optimization gives a significant performance win. The sweet spot for zlib is apparently `-O2`, both `-Ofast` and `-O3` are slightly worse (regression is about 3% compared with `-O2) in my testing. Happy to share my methodology with people so we can benchmark on a wider variety of systems. | |||||
| 2017-10-25 | Update for 'eccodes'. (#5899) | Sergey Kosukhin | 3 | -20/+102 | |
| 2017-10-25 | Add package for scalpel@0.5.3 (#5901) | George Hartzell | 1 | -0/+101 | |
| * Add package for scalpel@0.5.3 Scalpel's a bit of a mess, it expects it's users to just unpack the tarball, build it in the resulting directory and install that directory onto their PATH. My install step recapitulates this into prefix.bin. The alternative was rewiring their scripts (perl), which use `FindBin` and expect things to be located in the same dir that the script itself is. Sigh. Lightly tested on CentOS 7. * Flake8 cleanup * Additional flake8 cleanup | |||||
| 2017-10-25 | adding perl-bio-perl and dependencies (#5845) | Audrey Thoma | 11 | -0/+428 | |
| * perl-bio-perl and dependencies * minor fixes * condensing code * fixing doc error | |||||
| 2017-10-25 | Update for 'cdo'. (#5947) | Sergey Kosukhin | 1 | -53/+68 | |
| 2017-10-25 | bwa: add 0.7.17 (#5902) | Eric | 1 | -0/+4 | |
| * bwa: add 0.7.17 * bwa: add 0.7.13 | |||||
| 2017-10-25 | Add old version to bcftools (#5907) | George Hartzell | 2 | -0/+9 | |
| * bcftools v1.2 and htslib v1.2 * dependency change - only require dependencies for v1.2 | |||||
| 2017-10-25 | py-xlsxwriter: new package (#5918) | Audrey Thoma | 1 | -0/+35 | |
| 2017-10-25 | adding bedtools2 v2.23.0 (#5911) | George Hartzell | 1 | -0/+1 | |
| 2017-10-25 | Parallel fix sbangs (#5910) | George Hartzell | 1 | -0/+16 | |
| * Added procedure to edit sbangs of the parallel perl scripts. * Specify the types of perl dependency Adding ", type=('build', 'run')" to the dependency declaration to clarify when and how perl is required * flake8 cleanup | |||||
| 2017-10-25 | adding perl-moose and dependencies (#5912) | Audrey Thoma | 29 | -0/+1033 | |
| * adding perl-moose and dependencies * added missing dependency * fixed flake8 errors | |||||
| 2017-10-25 | Added Hypre Dependency to mfem+hypre (#5929) | Robert Pavel | 1 | -0/+1 | |
| Added missing hypre defendency from mfem's hypre-enabled version | |||||
| 2017-10-25 | r-geneplotter: Create new package. (#5924) | lingnanyuan | 1 | -0/+42 | |
| 2017-10-25 | r-gridextra: Update version to 2.3 (#5915) | lingnanyuan | 1 | -1/+3 | |
| 2017-10-25 | r-geiger and dependencies (#5933) | Audrey Thoma | 4 | -0/+151 | |
| 2017-10-25 | r-rbgl: Create new package. (#5931) | lingnanyuan | 1 | -0/+38 | |
| 2017-10-25 | r-variantannotation: created new package (#5932) | Yifan Zhu | 1 | -0/+54 | |
| 2017-10-25 | r-gseabase: Create new package. (#5930) | lingnanyuan | 1 | -0/+43 | |
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index : spack | |
| A flexible package manager that supports multiple versions, configurations, platforms, and compilers. | root |
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