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2021-06-23FTObjectLibrary: new package (#24423)Joseph Schoonover1-0/+19
Co-authored-by: Joe Schoonover <joe@fluidnumerics.com>
2021-06-23New package: py-mouseinfo (#24245)Jen Herting1-0/+38
* [py-mouseinfo] created template * [py-mouseinfo] added some dependencies * [py-mouseinfo] added platform dependent dependency information * [py-mouseinfo] flake8 * [py-mouseinfo] added python2 dependency and conflict with darwin for missing dependency * [py-mouseinfo] Final cleanup - added homepage - added description - removed fixmes * [py-mouseinfo] using pil provider
2021-06-23gsl: add v2.7 (#24474)Olivier Cessenat1-0/+1
2021-06-23Add dependency on rocm-cmake to various ROCm related packages (#24427)Uwe Sauter8-0/+8
2021-06-22add version 35.0 of luaposix (#24458)Peter Scheibel1-0/+2
2021-06-22ASP-based solver: fix provider logic (#24351)Massimiliano Culpo2-0/+27
This commit fixes a subtle bug that may occur when a package is a "possible_provider" of a virtual but no "provides_virtual" can be deduced. In that case the cardinality constraint on "provides_virtual" may arbitrarily assign a package the role of provider even if the constraints for it to be one are not fulfilled. The fix reworks the logic around three concepts: - "possible_provider": a package may provide a virtual if some constraints are met - "provides_virtual": a package meet the constraints to provide a virtual - "provider": a package selected to provide a virtual
2021-06-22z3: set CMAKE_INSTALL_PYTHON_PKG_DIR for +python build (#24470)Ethan Stam1-0/+11
2021-06-22py-cartopy: mark incompatibility with PROJ 8 (#24454)Adam J. Stewart1-2/+2
2021-06-22sw4lite: fixed to include build targets (#24466)OliverPerks1-2/+2
2021-06-22dd4hep: Updated version checksum due to updated tag (#24469)Thomas Madlener1-1/+1
2021-06-22subread: updating subread to 2.0.2 (#24468)snehring1-0/+1
2021-06-22Bump libfuse (#24444)Harmen Stoppels1-0/+1
2021-06-22py-pandas: add v1.2.5 (#24464)Adam J. Stewart1-0/+1
2021-06-22py-numpy: add v1.21.0 (#24463)Adam J. Stewart1-0/+4
2021-06-22tau: use filter_compiler_wrappers to take advantage of builtin functionality ↵eugeneswalker1-17/+4
(#24457)
2021-06-22py-scipy: add v1.7.0 (#24438)Adam J. Stewart1-0/+2
2021-06-22Implement CVS fetcher (#23212)Erik Schnetter1-0/+13
Spack packages can now fetch versions from CVS repositories. Note this fetch mechanism is unsafe unless using :extssh:. Most public CVS repositories use an insecure protocol implemented as part of CVS.
2021-06-22py-pythran: add new package (#24440)Adam J. Stewart1-0/+25
2021-06-22adding save of build times on install (#24350)Vanessasaurus1-0/+30
Here we are adding an install_times.json into the spack install metadata folder. We record a total, global time, along with the times for each phase. The type of phase or install start / end is included (e.g., build or fail) Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-06-22py-beniget: add new package (#24439)Adam J. Stewart1-0/+19
2021-06-22py-gast: add v0.4.0 (#24437)Adam J. Stewart1-0/+1
2021-06-21hdf5: fix compiler detection in flag_handler (#24451)Paul Henning1-1/+1
The original implementation of `flag_handler` searched the `self.compiler.cc` string for `clang` or `gcc` in order to add a flag for those compilers. This approach fails when using a spack-installed compiler that was itself built with gcc or clang, as those strings will appear in the fully-qualified compiler executable paths. This commit switches to searching for `%gcc` or `%clang` in `self.spec`. Co-authored-by: Paul Henning <phenning@lanl.gov>
2021-06-21open mpi: remove preferred for 4.0.5 release (#24433)Howard Pritchard1-1/+1
the 4.1.1 release has fixes for problems that kept 4.1.0 from being the default open mpi version to build using spack. related to #24396 Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2021-06-21MAGMA: add patch to build with CUDA sm_37 (#24442)Adam J. Stewart2-0/+28
2021-06-22Axom: Remove blueos check on cuda variant (#24349)Chris White1-63/+67
* remove blueos check on cuda variant, fix typo * restore necessary compiler guard * remove axom+cuda from testing because it only partially works outside ppc systems
2021-06-21Fetching: git on Mac OS (#24247)Peter Scheibel1-1/+2
Extend the changes in #24163 to unit tests.
2021-06-19psimd: add new package (#24406)Adam J. Stewart1-0/+24
2021-06-19cpuinfo: add new versions (#24402)Adam J. Stewart1-0/+7
2021-06-19FP16: add new versions, prevent downloads (#24403)Adam J. Stewart1-4/+42
2021-06-19pthreadpool: add new versions (#24404)Adam J. Stewart1-0/+6
2021-06-19FXdiv: add new package (#24405)Adam J. Stewart1-0/+47
2021-06-19singularity: add v3.8.0 (#24407)snehring1-0/+1
2021-06-19Beast2: add v2.6.4 (#24410)Alec Scott1-1/+3
2021-06-19bedtools2: add v2.30.0 (#24412)Alec Scott1-1/+2
2021-06-19benchmark: add v1.5.5 (#24413)Alec Scott1-2/+3
2021-06-19Bismarck: add v0.23.0 (#24414)Alec Scott1-1/+2
2021-06-19cantera: add v2.5.1 (#24415)Alec Scott1-1/+3
2021-06-19coreset: add v1.09 (#24419)Alec Scott1-1/+2
2021-06-19diamond: add v2.0.9 (#24421)Alec Scott1-1/+3
2021-06-18reditools: update and add features (#24370)Glenn Johnson5-944/+236
This PR does the following: - adds version corresponding to commit at 08/03/2020 - adds missing get_DE_events.py script - adds dependencies needed by get_DE_events.py - removes REDItoolDenovo.py.patch and python2to3.patch in favor of running 2to3 and reindent pre-build - add batch_sort.patch to handle differences in string/char handling betweeen python2 and python3 - adds a variant for the Nature Protocol - adds dependencies for the nature_protocol variant - added myself as maintainer This PR adds a new version of reditools from git.
2021-06-18Add LIKWID 5.2.0 and a patch for LIKWID 5.1.0 (#24399)Thomas Gruber1-3/+27
2021-06-18abi-dumper: add v1.2 (#24392)Alec Scott1-3/+4
2021-06-18SLATE: Add e4s testsuite-inspired smoke test (#23376)Sergei Shudler1-0/+28
2021-06-18Heffte: Add e4s testsuite-inspired smoke test (#23652)Sergei Shudler1-0/+61
2021-06-18Removed unofficial MAGMA release and enabled MAGMA in e4s (#24400)G-Ragghianti2-30/+1
2021-06-18spla: add version 1.5.0 and fix compilation with amdblis (#24374)Simon Frasch2-0/+18
2021-06-18Checksum update for NAGCompiler download , Version 7.0 (Build 7048) (#24360)Themos Tsikas1-1/+1
2021-06-18petsc, petsc4py: add version 3.15.1 (#24397)Satish Balay2-0/+2
2021-06-18double-conversion: New versions 3.1.5, 2.0.2 (#24385)Erik Schnetter1-0/+2
A version 2.0.3 is also advertised, but doesn't download.
2021-06-18Fixes for opencv (#24361)Glenn Johnson2-4/+28
This PR fixes a couple of issues with the opencv package, mostly in relation to cuda. This is only focused on cuda, not any of the other variants. - Added versions to the contrib_vers list. Added for all that can be retrieved from github. The one for the latest version was missing. - Added a cmake patch for v3.2.0. - Deprecated versions 3.1.0 and 3.2.0 as neither of those could be built, with or without cuda. - Adjusted constraints on applying initial cmake patch. - Added cudnn dependency when +cuda. - Set constraints for cudnn and cuda for older versions of opencv.
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