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2020-04-28netcdf-fortran: add new variants (#16046)Carson Woods2-0/+11
* Add additional variants to netcdf-fortran * Fix duplicate variant * Clean up variants based on review feedback * Addtional variant changes * Convert jna variant to single line * Fix proper version constraints for jna variant
2020-04-28jsoncpp add 1.9.2, patch %clang@10 for implicit conversion (#16153)Stephen McDowell1-0/+12
* add 1.9.2, patch %clang@10 for implicit conversion * flake8: "fix" hanging indent (squash: because is that really more readable?)
2020-04-28Add new package: figlet (#16355)darmac1-0/+31
2020-04-28kokkos: add versions 3.0.00 and 3.1.00 (#16354)Cameron Smith1-0/+2
2020-04-28bazel: support for aarch64 platform (#16350)darmac1-1/+5
2020-04-28Add new package: etcd (#16348)darmac1-0/+35
2020-04-28Add new package: kubernetes (#16347)darmac1-0/+25
2020-04-28adjust petsc to build cuda only when requested explicitly (#16275)Jeffrey Salmond1-2/+4
* adjust petsc+cuda to build cuda only when requested explicitly * activate petsc library support only when explicitly requested * flake8 fixes
2020-04-28openmpi: add additional variants (#16044)Carson Woods1-2/+22
* Add variants to OpenMPI * Add variant for toggling runpath * Fix typo * Remove blank line whitespace
2020-04-28netcdf-c: Patch to support hdf linked against libtirpc (#15994)Tom Payerle1-0/+3
If hdf was built with +libtirpc, we need to add -ltirpc to our link flags.
2020-04-28votca-*: fix stable deps (#16339)Christoph Junghans2-5/+5
2020-04-28cassandra: added v3.11.6 and dependency on Java (#16341)darmac1-1/+4
2020-04-28colordiff: modified url to fix 404 error (#16349)darmac1-1/+1
2020-04-27votca-*: add stable version (#16336)Christoph Junghans5-4/+14
* votca-*: add stable version * votca-*: add myself as maintainer
2020-04-27CP2K: arch file improvements and blas-dependency simplification (#16074)Tiziano Müller1-75/+127
* cp2k: prettify arch-file, call pkg-config directly this allows to re-use the arch-file without having to load the complete Spack environment, for example after a dev-build * cp2k: use consistency check instead of blas lib enum this makes using other BLAS/LAPACK implementations possible without explicitly adding support for them * cp2k: add basic support for Cray and XL Compilers, correct Intel fp mode * cp2k: add myself as maintainer * cp2k: use "master" to denote the git version * cp2k: use spack_cc/fc/cxx when possible, set CXX explicitly * cp2k: set __MKL when using the MKL, not just the Intel compiler * cp2k: drop self. when referencing spec where possible * cp2k: add forgotten elpa+openmp dep * cp2k: set C++14 for recent versions
2020-04-27abseil-cpp: new Version, Build Shared Library (#16125)Dr. Christian Tacke1-0/+8
* Add new version: "Abseil LTS branch, Feb 2020, Patch 1" * Build shared libraries by default with new version * Older versions do not support building shared libraries
2020-04-27Update bat and make the url dynamic (#16127)Diego Magdaleno1-10/+3
* Update bat and make the url dynamic - Now depending on the version it will calculate the url - This also fixes a weird issue that was reported on Darwin, back when I reported that Rust wasn't linking properly on Darwin #15887 on the comment by hartzell i was also experiencing this issue * Remove unnecessary stuff - Removes the need for LLVM - Removes the need for version calculation. * Keep the versions on 1 line * Pass flake8 tests
2020-04-27Add a new package Exa (#16126)Diego Magdaleno1-0/+21
* Add new package exa * Format and fix a silly typo * Fix SHA256 SUM and make URL calculation dynamic * Remove unnecessary URL calculation * Update package.py * Keep the version on 1 line * Pass flake8 checks
2020-04-27Add ShengBTE (#16154)asmaahassan901-0/+39
* Add ShengBTE Adding a new package; ShengBTE. I tried adding it a MakefilePackage, and use build_directory = 'Src', but it was as if the build_directory gets ignored and make complains about target not found. and using the make funtion here instead of os.system, I get errors that config.f90 is not found which is already available under Src as well. * more enhancmenets fix lint; use mkl spec; use build_directory variable * one more fix * Use Makefile template * Update var/spack/repos/builtin/packages/shengbte/package.py use mkl instead of intel-mkl as a dependency Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/shengbte/package.py update recipe as suggested by reviewer Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * enhance recipe remove white space; changes as suggested by reviewer Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-04-27python : fix SSL for older Python versions (#16217)Joseph Ciurej1-8/+40
* Fixed SSL pathing for older versions of Python (i.e. @:3.6.999). * Fixed an issue where the 'python~ssl' variant wasn't properly being respected. * Improved the '~ssl' patch by making it functional instead of diff-based (enables 3.X.Y patches). * Fixed comment formatting to satisfy 'flake8' style requirements.
2020-04-27elfutils: Add version 0.179 (#16334)Tim Haines1-1/+2
2020-04-27graphviz: add poppler support (#16331)Christoph Junghans2-2/+6
* graphviz: add poppler support * graphviz: actually needs poppler+glib * poopler: fix glib build, new version
2020-04-27hpcviewer: add version 2020.04 (#16332)Mark W. Krentel2-1/+12
* hpcviewer: add version 2020.04 * ibm-java: add version 8.0.6.7
2020-04-27cuDNN: Help dependents find libs/includes on Power arch (#16128)Brian Van Essen1-0/+5
On Power architectures cuDNN will install in a target directory. This sets cuDNN_ROOT to point to the subdirectory to help dependents use this install.
2020-04-27ecflow added version 4.12.0 (#16327)Amjad Kotobi1-0/+1
2020-04-27cmake added version 3.17.1 (#16326)Amjad Kotobi1-0/+1
2020-04-27update cctools to version 7.1.3 (#16324)Benjamin Tovar1-1/+2
2020-04-27Make mariadb provide mysql-client... (#16322)iarspider1-0/+1
... as well as mariadb. Needed for ROOT.
2020-04-27update podio version formatting (#16321)vvolkl1-4/+17
* update podio version formatting * [podio] formatting fixes
2020-04-27[dd4hep] url and other fixes (#16320)vvolkl2-2/+41
2020-04-27MODYLAS: New package (#16317)Toyohisa Kameyama3-0/+477
2020-04-27Add new package: stinger (#16316)darmac1-0/+26
2020-04-27Add new package: smartdenovo (#16310)darmac2-0/+59
2020-04-27tulip: added new package at v5.4.0 (#16319)Massimiliano Culpo1-0/+42
closes #3479 Co-authored-by: Kate Isaacs <kisaacs@cs.arizona.edu> Co-authored-by: Kate Isaacs <kisaacs@cs.arizona.edu>
2020-04-27singularity: better info re post-install step (#16311)George Hartzell1-1/+4
The singularity info should actually suggest where you might find the info about the post-install steps. Co-authored-by: george.hartzell <george.hartzell@sana.com>
2020-04-27xabclib: added package at v1.03 (#16271)Toyohisa Kameyama1-0/+60
2020-04-27spglib: added libs property (#16318)asmaahassan901-0/+5
2020-04-27votca-csg: Block gromacs@2020 and newer (#16315)Christoph Junghans1-1/+1
2020-04-26ppOpen-APPL/AMR-FDM: New package (#16199)Toyohisa Kameyama1-0/+62
* ppOpen-APPL/AMR-FDM: New package * separate build and install. * Fix description.
2020-04-26qt: fix macOS w/ AppleClang (mesa libs) (#16302)Axel Huebl1-1/+3
Building the `py-jupyter` stack on macOS with AppleClang breaks on the `py-qtconsole` -> `py-qtconsole` -> `qt +opengl` package build environment setup with: ``` ==> Error: AttributeError: Query of package 'mesa' for 'libs' failed ... ==> Error: Failed to install qt due to ChildError: AttributeError: Query of package 'mesa' for 'libs' failed ``` This tries to add more library targets build by `mesa` to avoid this.
2020-04-26libpciaccess: mirror (#16312)Axel Huebl1-2/+2
Support mirrors for libpciaccess downloads.
2020-04-26libbsd: mirror (#16313)Axel Huebl1-1/+4
Add a mirror for `libbsd` to improve fetch stability. libbsd.freedesktop.org sometimes failes in my nightly CI/CD scripts.
2020-04-26py-profilehooks (new package) (#16305)Axel Huebl1-0/+20
Adds the py-profilehooks package.
2020-04-26py-blosc (new package) (#16307)Axel Huebl1-0/+23
Add the py-blosc python package.
2020-04-26py-h5py: master (new version) (#16306)Axel Huebl1-0/+2
Add the `master` branch of h5py as a version.
2020-04-26PyTorch: disable XNNPACK build (#16304)Adam J. Stewart1-0/+5
2020-04-25LLVM lldb 10.0: Python Link Dependency (#16299)Axel Huebl1-2/+6
* LLVM: Python Dependency Effort to expose the linked python library when building LLVM. This might fix the forward propagation of libintl that comes with the static python library build on darwin. * LLDB Py: Remove Ignored Old Flags Changed in LLVM 10.0+
2020-04-25py-pyyaml: add new version and variant (#16301)Adam J. Stewart1-4/+18
2020-04-25libyaml: add new version (#16300)Adam J. Stewart1-1/+3
2020-04-25ucx : add version, modify variants (#16252)Sajid Ali1-1/+11
* fixes * remove extra newline