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2021-09-02start of work to add spack audit packages-https checker (#25670)Vanessasaurus609-610/+610
This PR will add a new audit, specifically for spack package homepage urls (and eventually other kinds I suspect) to see if there is an http address that can be changed to https. Usage is as follows: ```bash $ spack audit packages-https <package> ``` And in list view: ```bash $ spack audit list generic: Generic checks relying on global variables configs: Sanity checks on compilers.yaml Sanity checks on packages.yaml packages: Sanity checks on specs used in directives packages-https: Sanity checks on https checks of package urls, etc. ``` I think it would be unwise to include with packages, because when run for all, since we do requests it takes a long time. I also like the idea of more well scoped checks - likely there will be other addresses for http/https within a package that we eventually check. For now, there are two error cases - one is when an https url is tried but there is some SSL error (or other error that means we cannot update to https): ```bash $ spack audit packages-https zoltan PKG-HTTPS-DIRECTIVES: 1 issue found 1. Error with attempting https for "zoltan": <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: Hostname mismatch, certificate is not valid for 'www.cs.sandia.gov'. (_ssl.c:1125)> ``` This is either not fixable, or could be fixed with a change to the url or (better) contacting the site owners to ask about some certificate or similar. The second case is when there is an http that needs to be https, which is a huge issue now, but hopefully not after this spack PR. ```bash $ spack audit packages-https xman Package "xman" uses http but has a valid https endpoint. ``` And then when a package is fixed: ```bash $ spack audit packages-https zlib PKG-HTTPS-DIRECTIVES: 0 issues found. ``` And that's mostly it. :) Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com>
2021-09-01py-adios: add new version (#25746)Cody Balos1-1/+2
2021-09-01Bump nlohman-json and fix cmake args (#25504)Harmen Stoppels1-21/+18
* Bump nlohman-json and fix cmake args * Rename variant
2021-09-01Update versions for RAJA, CHAI, Umpire and camp (#25528)David Beckingsale4-46/+97
2021-09-01py-jupyterhub: add version: 1.4.1 (#24890)eugeneswalker2-11/+42
* py-jupyterhub: add version: 1.4.1 * dont need mako for latest release * sort dependencies * notebook isnt used for 1.4.1+ * add dependency on py-jupyter-telemetry; create new package py-jupyter-telemetry * py-jupyter-telemetry: declare missing dependencies * py-jupyterhub: need more specific depends_on before less specific * add py-json-logger; py-jupyter-telemetry: add depends_on for py-json-logger * Update var/spack/repos/builtin/packages/py-jupyter-telemetry/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * remove py-json-logger erroneously and duplicatively added * Update var/spack/repos/builtin/packages/py-jupyterhub/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * need py-alembic@1.4: for newest py-jupyterhub Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-01bugfix: R packages can be concretized together with clingo again (#25730)Harmen Stoppels1-1/+1
2021-09-01Add variant to allow unsupported compiler & CUDA combinations (#19736)David Beckingsale1-0/+2
Sometimes users need to be able to override the conflicts in `CudaPacakge`. This introduces a variant to enable/disable them.
2021-09-01Adding new versions of redis (#25714)Nisarg Patel1-4/+9
2021-09-01nghttp2: add v1.44.0, fix build (#25605)Harmen Stoppels1-20/+20
2021-09-01allow building silo+mpi ^hdf5~mpi (#25724)Peter Scheibel1-2/+1
2021-08-31Legion: Add E4S testsuite stand alone test (#25285)Richarda Butler1-0/+41
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2021-08-31Papyrus: Add E4S testsuite stand alone test (#25324)Richarda Butler1-0/+53
2021-08-31acts: add v12.0.0, v12.0.1 (#25697)Hadrien G1-0/+2
2021-08-30[py-plotly] added version 5.2.2 (#25668)Jen Herting1-5/+11
* [py-plotly] added version 5.2.2 * [py-plotly] flake8 * [py-plotly] requests not required for new version
2021-08-30py-pythran: update checksum for patch (#25693)Adam J. Stewart2-3/+72
* Replace URL patch with file patch * Add comment explaining patch origin and purpose
2021-08-30Updates to Exawind packages (#25568)psakievich6-39/+79
2021-08-30asciidoc-py3: add v9.1.0, v9.0.5 and v9.0.4 (#25562)lorddavidiii1-0/+3
2021-08-30plasma: add version 21.8.29, migrate url (#25688)Piotr Luszczek1-4/+5
2021-08-30gaudi: update py-xenv dependency (#25457)Valentin Volkl1-1/+1
2021-08-30Add patch to fix Boost with CCE and CUDA (#25534)Mikael Simberg1-0/+7
2021-08-30universal-ctags: add version p5.9.20210829.0 (#25361)Bryan Herman1-0/+2
2021-08-30mochi-margo: add v0.9.5 (#25365)Phil Carns1-0/+1
2021-08-30miniconda3: add v4.10.3 (#25442)Ryan Marcellino1-0/+2
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30anaconda3: add v2021.05 (#25443)Ryan Marcellino1-0/+1
Co-authored-by: Cloud User <marcryan@ryanmarcelli001.hzterscemazurawp3xenxzahla.bx.internal.cloudapp.net>
2021-08-30rivet: fixes for gcc@10: (#25454)Valentin Volkl2-2/+2
2021-08-30ocl-icd: add v2.3.1 (#25561)lorddavidiii1-0/+2
2021-08-30boost: add v1.77.0 (#25536)Mikael Simberg1-0/+1
2021-08-30py-pbr: fix import tests (#25679)Adam J. Stewart1-0/+3
2021-08-30py-jupyterlab: fix import tests (#25680)Adam J. Stewart1-0/+3
2021-08-30py-metpy: fix import tests (#25681)Adam J. Stewart1-0/+4
2021-08-30py-flit-core: build from source (#25682)Adam J. Stewart1-9/+14
2021-08-30tmux: added additional versions. (#25684)Barry Rountree1-0/+7
Added sha256 checksums for 3.21, 3.2, 3.1c 3.1a, 3.1, 3.0 and 2.9a. Co-authored-by: Barry <rountree4@llnl.gov>
2021-08-30FLAP: add new package (#25685)Joe Schoonover1-0/+25
Co-authored-by: Joe Schoonover <joe@fluidnumerics.com>
2021-08-30acts: add v11.0.0, v10.0.0 (#25444)Hadrien G1-0/+2
2021-08-29Bump py-salib (#25403)Sebastian Schmitt1-0/+4
2021-08-28add 'develop' branch to cmake package (#25623)Kai Germaschewski1-0/+3
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-08-28recorder: add v2.2.1, v2.2.0, "master" and "pilgrim" (#25674)Chen Wang1-0/+5
2021-08-27Add zstd support to libarchive (#25659)Harmen Stoppels1-7/+6
2021-08-27py-flit: add maintainer (#25667)Adam J. Stewart2-3/+2
2021-08-27add py-flameprof (#25539)Harmen Stoppels1-0/+19
2021-08-27Add missing link dep for py-uwsgi (#25654)Harmen Stoppels1-0/+1
2021-08-27py-psycopg2: add version 2.9.1 (#25646)Adam J. Stewart1-3/+6
2021-08-27py-pathlib: prevent conflicts with standard library (#25631)Adam J. Stewart3-2/+10
2021-08-27New package: py-flit (#25630)Adam J. Stewart2-0/+48
2021-08-27FEniCSx packages: add version 0.3.0 (#25627)Chris Richardson5-8/+33
2021-08-27py-pyinstrument: add version 4.0.3 (#25632)Adam J. Stewart1-6/+9
* Swap github download link for pypi * Versions >= 4 dont need npm
2021-08-27r-irkernel: add version 1.2; update version 0.7 (#25644)Dylan Simon1-1/+2
Use a commit hash instead of a tag for 0.7
2021-08-27figlet: Fix figlet font dir (#25662)Jordan Galby1-0/+4
By default, figlet looks for fonts in `/usr/local/share/figlet`, and if it doesn't exist you get `figlet: standard: Unable to open font file`. This fix changes the default font dir to the one installed in the install prefix.
2021-08-27ESMF package: add version 8.1.1 (#25590)Timothy Brown1-5/+5
Also build with internal lapack library by default.
2021-08-27meson: add 0.59.1 and 0.58.2 (#25661)Michael Kuhn1-0/+2
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