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2023-07-19Remove `LazyReference` from code (#38944)Massimiliano Culpo1-1/+1
A LazyReference object is a reference to an attribute of a lazily evaluated singleton. Its only purpose is to let developers use shorter names to refer to such attribute. This class does more harm than good, as it obfuscates the fact that we are using the attribute of a global object. Also, it can easily go out of sync with the singleton it refers to if, for instance, the singleton is updated but the references are not. This commit removes the LazyReference class entirely, and access the attributes explicitly passing through the global value to which they are attached.
2023-07-19magma: add package name to conflict messages (#38984)Aiden Grossman1-9/+11
Without the package name being present in the conflict messages, it is significantly more difficult to debug concretization failures in environments that contain many packages.
2023-07-19petsc: add version 3.19.3 (#38974)downloadico2-0/+4
2023-07-19rmgdft: add v5.3.1, v5.4.0 and cuda variant (#37813)Emil Briggs1-11/+32
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-19mesa-glu: Patch register long to long (#38833)Aiden Grossman2-0/+32
mesa-glu still has a couple instances of the register keyword which causes build failures with clang on my platform. This patch removes the register keyword which doesn't have any impact on correctness.
2023-07-19gperf: patch usage of register keyword (#38893)Aiden Grossman2-0/+19
gperf still uses the register keyword in one place which makes compilation fail with c++17. This patch adds in a patch file to remove the usage of the reigster keyword so that it compiles properly.
2023-07-19elfutils: remove conflicts with clang after version 0.186 (#38945)Aiden Grossman1-5/+2
In late 2021 elfutils was patched to make it build with clang, and these patches ended up in version 0.186. This commit updates the conflicts to specify this so elfutils can be built with clang.
2023-07-19amdfftw: turn conflicts into conditional variants (#38221)Carlos Bederián1-76/+51
2023-07-19palace: fix bugs introduced in #38910 (#38983)Sebastian Grimberg1-9/+9
2023-07-18Improve RDKit package (#36566)Rocco Meli3-8/+73
2023-07-18palace: add v0.11.2 (#38910)Sebastian Grimberg1-36/+49
2023-07-18py-poetry-core: add 1.6.1 and fix url (#38452)Manuela Kuhn1-3/+12
* py-poetry-core: add 1.6.1 and fix url * Update var/spack/repos/builtin/packages/py-poetry-core/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Re-add python upper bound for older versions * Update var/spack/repos/builtin/packages/py-poetry-core/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-18FleCSPH: update package (#37888)Julien Loiseau1-19/+13
Co-authored-by: Richard Berger <richard.berger@outlook.com>
2023-07-18fftw: fix build with clang15+ (#38889)Aiden Grossman1-0/+7
In Clang 15, -Wint-conversion became an error instead of a warning, breaking the fftw build for clang versions > 15. This patch fixes fftw builds with clang 15+ by passing -Wno-error=int-conversion as a cflag.
2023-07-18chameleon: update to version 1.2.0 (#38936)fpruvost1-1/+3
2023-07-18buildcache push: make --allow-root the default and deprecate the option (#38878)Harmen Stoppels1-2/+2
Without --allow-root spack cannot push binaries that contain paths in binaries. This flag is almost always needed, so there is no point of requiring users to spell it out. Even without --allow-root, rpaths would still have to be patched, so the flag is not there to guarantee binaries are not modified on install. This commit makes --allow-root the default, and drops the code required for it. It also deprecates `spack buildcache preview`, since the command made sense only with --allow-root. As a side effect, Spack no longer depends on binutils for relocation
2023-07-18Update dbcsr and cp2k to latest version (#38939)Taillefumier Mathieu2-11/+22
Co-authored-by: Mikael Simberg <mikael.simberg@iki.fi>
2023-07-18Update package.py (#38946)Houjun Tang1-0/+1
2023-07-17wannier90 github (#38927)Rocco Meli1-0/+2
2023-07-17meson: add 1.2.0, 1.1.1 and 1.0.2 (#38935)Michael Kuhn1-0/+3
2023-07-18added new packages (#38941)Andrey Perestoronin16-0/+96
2023-07-18Update gsi-ncdiag/1.1.1 sha256 (#38943)David Huber1-1/+1
2023-07-17py-soupsieve: add 2.4.1 (#38929)Manuela Kuhn1-3/+5
2023-07-17py-setuptools: add 68.0.0 (#38930)Manuela Kuhn1-0/+5
* py-setuptools: add 68.0.0 * [@spackbot] updating style on behalf of manuelakuhn
2023-07-17py-setuptools-rust: add 1.6.0 (#38932)Manuela Kuhn1-3/+6
2023-07-17py-sphinxcontrib-applehelp: add 1.0.4 (#38933)Manuela Kuhn1-1/+3
2023-07-17py-sphinxcontrib-htmlhelp: add 2.0.1 (#38934)Manuela Kuhn1-2/+4
2023-07-17py-pyside: fix build with python3.8 (#38886)Manuela Kuhn1-18/+10
* py-pyside: fix build for version 1.2.2 * Remove check for python version * Fix style * Remove unnecessary patch * Update var/spack/repos/builtin/packages/py-pyside/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pyside/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Remove py-markupsafe conflict * Update var/spack/repos/builtin/packages/py-pyside/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pyside/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Move python check removal below suprocess patch * Remove preference of 1.2.2 --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-17soapdenovo2: strip optimization flags from injected flags (#38846)snehring1-5/+10
* soapdenovo2: strip optimization flags from injected flags * soapdenovo2: add maintainer * soapdenovo2: only append on cflags * soapdenovo2: clean up some wording and implementation
2023-07-17justbuild: add v1.1.3 (#38925)Alberto Sartori1-0/+1
2023-07-17vecgeom: new version 1.2.4 (#38940)Seth R. Johnson1-0/+1
2023-07-17libxc: add kxc and lxc variants (#38937)Ashwin Kumar Karnad1-0/+6
* libxc: add kxc and lxc variants * libxc: add kxc and lxc variants for @5:0: * Apply suggestion from @tldahlgren --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2023-07-17Enable http/2 support by default in curl (#38750)Harmen Stoppels1-1/+1
2023-07-17librsvg: add 2.56.2 and rust upper version limit for 2.51 (#38766)Manuela Kuhn1-7/+22
* librsvg: add rust upper version limit * librsvg: Add 2.56.2
2023-07-17qt-base: fix build on macos, when +network (#38519)Martin Aumüller1-5/+18
* qt-base: always link to GSS framework on macOS On macos, the code in src/network/kernel/qauthenticator.cpp unconditionally includes the header from the GSS framework, so we should link against it. This applies two patches from the dev branch. They are to be cherry-picked into the 6.5 (probably released with 6.5.2) and 6.6 branches, but they apply against 6.3.2 as well. * qt-base: disable libproxy on macOS src/network/CMakeLists.txt disables it on MACOS anyway. And as it is not found without pkg-config, building with +network would break because of the feature being explicitly enabled. * qt-base: don't depend on pkgconfig on macOS On macOS, usage of pkg-config is disabled by unsetting PKG_CONFIG_EXECUTABLE, unless the feature pkg-config is requested explicitly. * qt-base: don't depend on at-spi2-core on macOS Does not build on macOS and seems to be targeted at linux. Qt6 on homebrew does not depend on it, either. * qt-base: fix long lines * qt-base: restrict use of pkgconfig to linux yes, probably not needed on windows, either Co-authored-by: Alec Scott <alec@bcs.sh> * qt-base: disable libproxy on Windows as well according to src/network/CMakeLists.txt it's only used on Unix * qt-base: improvements based on reviewer suggestions --------- Co-authored-by: Alec Scott <alec@bcs.sh>
2023-07-17legion: Add 23.06.0, variants for UCX, max nodes, update CUDA version. (#38759)Elliott Slaughter1-8/+29
* legion: Add 23.06.0, variants for UCX, max nodes, update CUDA version. * legion: Make newer CUDA versions dependent on newer Legion. * legion: Update CUDA arch list so that we can stop tracking manually.
2023-07-17HiPACE++ 23.07 (#38862)Maxence Thévenet1-2/+12
* Update package and fix compilation issues * fix order
2023-07-17Added py-eprosima-fastdds package (#38877)Daniele Cesarini1-0/+29
* Added py-eprosima-fastdds package * Fixed python extension and dependency version * Added build type for swig * Added minimum cmake support * Added py-test dependency * Added suggestion on python extension Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Added suggestion on build type for cmake Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-17root: Add package name to all conflict messages (#38920)Aiden Grossman1-9/+13
Not having the package name in the conflict messages can make debugging conflicts exceedingly hard when trying to concretize an environment with a sufficient number of packages. This patch adds the package name to all of the conflict messages so that it is easy to tell just from the message which package is causing conflicts.
2023-07-15py-jinja2: add conflict for py-markupsafe@2.0.2 (#38913)Manuela Kuhn1-0/+3
* py-jinja2: add conflict for py-markupsafe@2.0.2 * Update var/spack/repos/builtin/packages/py-jinja2/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-15py-shiboken: fix build by restricting dependencies (#38900)Manuela Kuhn1-2/+5
* py-shiboken: fix build by restricting dependencies * Update var/spack/repos/builtin/packages/py-shiboken/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Remove conflict * Remove py-markupsafe conflict * Update var/spack/repos/builtin/packages/py-shiboken/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-15py-furo: add new package (#38904)Manuela Kuhn3-0/+66
2023-07-15py-sphinx-rtd-theme: add 1.2.2 and py-sphinxcontrib-jquery: add 4.1 (#38896)Manuela Kuhn2-7/+12
2023-07-14py-cupy: Add 11.3.0, 11.4.0, 11.5.0, 11.6.0, 12.0.0, 12.1.0 (#38911)Elliott Slaughter1-4/+14
* py-cupy: Add 11.3.0, 11.4.0, 11.5.0, 11.6.0, 12.0.0, 12.1.0. * Clean up version bounds.
2023-07-14add a phist patch to avoid trying to compile SSE code if that is not … ↵Jonas Thies2-0/+350
(#38806) * add a phist patch to avoid trying to compile SSE code if that is not available. * phist: make the avoid-sse patch more robust because compiler on ARM system still tried to compile SSE code
2023-07-14spiner: update dependencies (#37367)Richard Berger1-5/+4
* spiner: update dependencies * spiner: add v1.6.1 and updated dependency
2023-07-14legion package: use conditional variants for gasnet (#38902)Massimiliano Culpo1-37/+17
2023-07-14lmdb: add 0.9.31 (#38892)Michael Kuhn1-0/+1
2023-07-14podio: add 0.16.6 tag and mark older releases as deprecated (#38891)Thomas Madlener1-5/+26
* podio: Add latest tag * podio: Deprecate older versions
2023-07-14new release and bug fix on check() (#38901)G-Ragghianti2-4/+11
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