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2021-11-29py-iminuit: add new versions 2.8.4 (#27680)Valentin Volkl1-0/+3
* py-iminuit: add new versions 2.8.4 * py-iminuit: update python dependency * py-iminuit: fix typo * flake8
2021-11-29py-setuptools: add 59.4.0 (#27692)Manuela Kuhn1-0/+1
2021-11-29r-tidyverse: add 1.3.1 (#27291)Manuela Kuhn1-26/+55
2021-11-29dsfmt package: fix shared libs (#27628)Harmen Stoppels2-22/+20
Also: * Remove 2.2.3 (doesn't build shared libs) * Add versions 2.2.4 and 2.2.5
2021-11-29petsc: archive configure.log make.log from the build (#27677)Satish Balay1-1/+6
Also enable verbose build
2021-11-29py-intensity-normalization: add package (at version 2.1.1) (#27593)Ben Darwin2-0/+48
* py-scikit-fuzzy: new package (at version 0.4.2) * py-intensity-normalization: new package (at version 2.1.1)
2021-11-29py-gevent: add 21.8.0 (#27699)Manuela Kuhn1-12/+21
2021-11-29py-pyparsing: add 3.0.6 (#27693)Manuela Kuhn2-27/+5
* py-pyparsing: add 3.0.6 * Add suggestions
2021-11-29py-packaging: add 21.3 (#27691)Manuela Kuhn1-4/+7
* py-packaging: add 21.3 * Update var/spack/repos/builtin/packages/py-packaging/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-29llvm: Fix building llvm@4:9 using %clang@6: and %gcc@10: (#27233)Bernhard Kaindl8-16/+308
Add z3 variant, fix @:9%gcc@9: with glibc2.31, fix no_cyclades range
2021-11-29py-tifffile: add 2021.11.2 (#27695)Manuela Kuhn1-1/+2
2021-11-29py-httpretty: add 1.1.4 (#27687)Manuela Kuhn1-0/+1
2021-11-29py-zope-interface: add 5.4.0 (#27596)Manuela Kuhn1-0/+1
2021-11-29py-gast: add 0.5.3 (#27686)Manuela Kuhn1-0/+1
2021-11-29py-importlib-metadata: add 4.8.2 (#27690)Manuela Kuhn1-0/+1
2021-11-29py-humanize: add 3.12.0 (#27688)Manuela Kuhn1-0/+9
2021-11-29VisIt: remove upper range restriction on llvm. (#27648)Eric Brugger1-1/+2
2021-11-29py-matplotlib: add v3.5.0 (#27486)Adam J. Stewart3-17/+64
* py-matplotlib: add v3.5.0 * Remove deprecated versions, update setup.cfg filename * Add additional dependencies, save config file * Add patch to fix matplotlibrc
2021-11-29OpenMPI: add version 4.1.2 (#27645)Howard Pritchard1-1/+2
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2021-11-29py-scipy: add v1.7.3 (#27649)Adam J. Stewart1-0/+1
2021-11-29py-greenlet: add v1.1.2 (#27594)Manuela Kuhn1-0/+1
2021-11-29gpgme: Add 0.16.0 and address test suite issues (#27604)Bernhard Kaindl1-1/+30
A part of the gpgme testsuite by default even runs during normal make and make install phases, creating a public keyring in ~/.gnupg. Prevent this and avoid build failures in containers due to another problem of the test suite and fix a test case of the new 0.16.0 release.
2021-11-29ParaView: Build edition strings should be uppercase (#27534)Ethan Stam1-1/+1
2021-11-29py-pytorch-lightning: add v1.5.3 (#27650)Adam J. Stewart1-4/+1
2021-11-29pixz: add v1.0.7 (#27651)Derek Ryan Strong1-0/+1
2021-11-29Random123: add v1.14.0 from github (#27660)Nicolas Cornu1-4/+8
2021-11-29podman: new package (with dependencies) (#27603)Bernhard Kaindl6-0/+200
When the uidmap tools are installed on a system, this allows to run containers as unprivileged user (rootless and daemonless) slimilar to singularity, but using a familiar CLI: "alias docker=podman" This is helpful to run e.g. spack builds in containers to reproduce build failures from CI without requiring a installation of docker. The required dependencies of podman are added as well.
2021-11-29edm4hep: update hepmc dependency (#27678)Valentin Volkl1-1/+2
2021-11-29gtkplus: fix build of GTK2 versions with gcc-11, skip X tests (#26970)Bernhard Kaindl1-1/+5
Fix to not attempt to patch a nonexisting file for old versions when building with gcc-11. Skip the build-time tests as all access the X DISPLAY and open many windows on the screen.
2021-11-29patchelf: add v0.13.1, v0.14, v0.14.1 (#27681)Harmen Stoppels1-9/+16
2021-11-29"branch" spelling mistake in libbeato (#27682)Vanessasaurus1-1/+1
I was browsing package metadata, as one does on a Sunday, and stumbled across a new kind of version attribute - brancch! I suspect this is supposed to be "branch."
2021-11-28Fix py-astroid recipe (#27670)iarspider1-2/+2
2021-11-28add flux-core v0.31.0 and flux-sched v0.20.0 (#27336)Mark Grondona3-2/+31
Update flux-core and flux-sched package.py to include latest releases. For flux-sched: - Add patch to disable false-positive-happy valgrind test - pin yaml-cpp to 0.6.3 due to issue described at: https://github.com/flux-framework/flux-sched/issues/886
2021-11-28gdk-pixbuf: Fix 2.42.2 and add 2.42.6 (#27254)Joseph Wang1-9/+14
Starting with meson 0.60, unknown args produce errors and the -Dx11 arg is only present in @:2.40 https://gitlab.gnome.org/GNOME/gtk-osx/-/issues/44 Add tiff variant: Default disabled since fails the tests in part. Only libtiff@:3.9 pass, but these old versions have severe security issues. Deprecate @:2.41 as they are affected by the high-severity CVE-2021-20240: https://nvd.nist.gov/vuln/detail/CVE-2021-20240
2021-11-27py-scipy: update pybind11 versions (#27679)iarspider1-1/+2
2021-11-26Apply requested fix from #27643 (#27672)iarspider1-1/+1
2021-11-26New version: py-send2trash 1.8.0 (#27583)iarspider1-0/+1
2021-11-26dyninst: use spack libiberty path (#25779)Jannis Schönleber1-0/+1
2021-11-26New version: py-tomlkit 0.7.2 (#27633)iarspider1-0/+1
2021-11-26New version: py-threadpoolctl 3.0.0 (#27632)iarspider1-0/+2
2021-11-26Fix py-aiohttp recipe (#27671)iarspider1-1/+1
2021-11-25Fix version constraint in py-ipykernel (#27665)iarspider1-1/+1
* Fix version constrains in py-ipykernel and py-ipython Before the fix: ``` $ spack spec py-ipykernel@6.4.1 ^py-jupyter-client@7.0.6 ==> Error: py-ipykernel@6.4.1 ^py-jupyter-client@7.0.6 is unsatisfiable, conflicts are: no version satisfies the given constraints ``` After the fix: ``` ``` (thanks god the old concretizer is still there - it provides sane error messages!) * Fix py-ipython recipe * Revert "Fix py-ipython recipe" This reverts commit d65071665f002fa20721c3d87ae25354bec06ec5.
2021-11-25New package: py-sphinx-argparse (#27663)Seth R. Johnson1-0/+21
2021-11-24New version: py-theano 1.0.5 (#27631)iarspider1-1/+2
2021-11-24New version: py-requests 2.26.0 (redo of #27579) (#27647)iarspider1-2/+7
2021-11-24New version: py-rsa 4.7.2 (#27581)iarspider1-0/+2
2021-11-24New version: py-rich 10.14.0 (redo of #27580) (#27646)iarspider1-1/+4
2021-11-24py-virtualenv package: add version 20.10.0; new dependency py-distlib (#27637)iarspider2-0/+28
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-11-24New version: py-requests-oauthlib 1.3.0 (#27578)iarspider1-0/+1
2021-11-24Adding packages for gptune and its dependencies (#26936)liuyangzhuan77-5/+645
* added package gptune with all its dependencies: adding py-autotune, pygmo, py-pyaml, py-autotune, py-gpy, py-lhsmdu, py-hpbandster, pagmo2, py-opentuner; modifying superlu-dist, py-scikit-optimize * adding gptune package * minor fix for macos spack test * update patch for py-scikit-optimize; update test files for gptune * fixing gptune package style error * fixing unit tests * a few changes reviewed in the PR * improved gptune package.py with a few newly added/improved dependencies * fixed a few style errors * minor fix on package name py-pyro4 * fixing more style errors * Update var/spack/repos/builtin/packages/py-scikit-optimize/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * resolved a few issues in the PR * fixing file permissions * a few minor changes * style correction * minor correction to jq package file * Update var/spack/repos/builtin/packages/py-pyro4/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fixing a few issues in the PR * adding py-selectors34 required by py-pyro4 * improved the superlu-dist package * improved the superlu-dist package * moree changes to gptune and py-selectors34 based on the PR * Update var/spack/repos/builtin/packages/py-selectors34/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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