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2022-05-02ADOL-C: Add a patch to force Colpack detection to fail (#30413)Jean-Paul Pelteret2-0/+19
2022-05-02binutils@2.38 %gcc: add -fPIC -fcommon -Wl,-z,notext (#30345)eugeneswalker1-5/+6
2022-05-02kokkos-kernels: add v3.6.00 (#30316)Luc Berger1-1/+3
2022-05-02environment-modules: add v5.1.0 (#30419)Xavier Delaruelle1-1/+2
2022-05-02dftd4: add v3.4.0 (#30423)Sebastian Ehlert1-0/+1
2022-05-02root: add v6.26.02 (#30426)Wouter Deconinck1-0/+1
2022-05-02gaudi: add v36.5 (#30427)Wouter Deconinck1-0/+1
2022-05-02sysstat: add 12.4.5 and fix build failures (#30121)Michael Kuhn1-3/+18
This adds the newest stable version (and removes old development versions), a few missing dependencies and workarounds for build failures. Without the environment variables, sysstat will try creating directories in `/var/log`, and without `--disable-file-attr`, sysstat will try to change file ownership.
2022-04-29libxml2: new url, add 2.9.13 (#30401)Harmen Stoppels1-1/+9
2022-04-29hapcut2: adding new version 1.3.1 (#30383)snehring1-3/+21
2022-04-29Add 3.14.0 (#30384)Paul R. C. Kent1-0/+1
2022-04-29beagle: adding 5.4, making java dep more flexible. (#30354)snehring1-1/+4
2022-04-29sundials: add 6.2.0 and logging-level variant (#30353)Cody Balos1-14/+24
2022-04-29Upcxx 2022.3.0 update (#30393)Dan Bonachea2-21/+80
* upcxx,gasnet: Add 2022.3.0 version hashes * gasnet: Add ofi and ucx experimental conduits * gasnet: Add CUDA and ROCm/HIP variants * upcxx: Add Cray EX/Shasta detection and auto-config * upcxx: Add ROCm/HIP support * Use implicit dependencies from CudaPackage, ROCmPackage
2022-04-29gsl: New version 2.7.1 (#30364)Erik Schnetter1-3/+4
2022-04-29gdal: changing behavior of configure for +xml2 with 3.0+ (#30405)snehring1-2/+5
* gdal: changing behavior of configure for +xml2 with 3.0+ * Update var/spack/repos/builtin/packages/gdal/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-29diamond: updating to 2.0.15 (#30386)snehring1-0/+2
2022-04-29added libpng version 1.5.30 to libpng package (#30395)dmentock1-0/+1
2022-04-29petsc, py-petsc4py: add 3.17.1 (#30399)Satish Balay2-0/+2
2022-04-29hto4l: Set GSL_HOME (#30402)haralmha1-0/+3
2022-04-29autoconf-archive: New version 2022.02.11 (#30403)Erik Schnetter1-0/+1
2022-04-29Pass blas flags to hsl lflags when ^coinhsl+blas (#30309)Asher Mancinelli1-2/+7
2022-04-29sqlite: New version 3.38.3 (#30370)Erik Schnetter1-0/+1
2022-04-29itstool: version 2.0.7 and py2 dependency (#30375)agoodLANL1-0/+4
* Added version 2.0.7 and a conflict * added maintainer
2022-04-29libjpeg-turbo: New version 2.1.3 (#30366)Erik Schnetter1-0/+3
2022-04-29Add checksum for py-prettytable@3.2.0 (#30329)Andrea Valenzuela1-0/+2
* Add checksum for py-more-itertools@8.12.0 and fix python dependency * Add checksum for py-prettytable@3.2.0 * Package version 8.11.0 is the only version that requires python 3.6+ Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Add reference to python@3.6 support when 8.11 * Revert "Add reference to python@3.6 support when 8.11" This reverts commit 0ba00021936568a8007b7644fa8dfb031a3ad044. * Add python 3.7: requirement * Revert range for python 3.6 * Revert py-more-itertools modifications Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-29htop: new variants (#30398)Jennifer Green1-2/+11
* htop variants for debug, hwloc, unicode support * removed redundant ncurses dep
2022-04-29libjpeg: New version 9e (#30365)Erik Schnetter1-0/+1
2022-04-29squashfs: new version, deprecated older versions (#30361)Harmen Stoppels1-9/+15
2022-04-29netcdf-fortran: add compat bound for netcdf-c (#30358)Harmen Stoppels1-0/+1
2022-04-29CrayPE_binutils package fix for CCE (#30338)luker1-0/+5
2022-04-29package/kealib: add libs property (#30391)Sinan1-0/+5
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2022-04-29netcdf-fortran: do not build with MPI wrappers (#30371)Sergey Kosukhin1-10/+17
2022-04-28meson: New version 0.62.1 (#30367)Erik Schnetter1-0/+1
2022-04-28reprimand: New version 1.4 (#30369)Erik Schnetter1-0/+1
2022-04-28SDK: Require paraview@5.10: in the ECP SDK (#30372)kwryankrattiger1-3/+3
* SDK: Require paraview@5.10: in the ECP SDK * SDK: Updated dev src conflicts to be more explicit
2022-04-28Add command for reading JSON-based DB description (now with more tests) (#29652)Peter Scheibel3-0/+41
This is an amended version of https://github.com/spack/spack/pull/24894 (reverted in https://github.com/spack/spack/pull/29603). https://github.com/spack/spack/pull/24894 broke all instances of `spack external find` (namely when it is invoked without arguments/options) because it was mandating the presence of a file which most systems would not have. This allows `spack external find` to proceed if that file is not present and adds tests for this. - [x] Add a test which confirms that `spack external find` successfully reads a manifest file if present in the default manifest path --- Original commit message --- Adds `spack external read-cray-manifest`, which reads a json file that describes a set of package DAGs. The parsed results are stored directly in the database. A user can see these installed specs with `spack find` (like any installed spec). The easiest way to use them right now as dependencies is to run `spack spec ... ^/hash-of-external-package`. Changes include: * `spack external read-cray-manifest --file <path/to/file>` will add all specs described in the file to Spack's installation DB and will also install described compilers to the compilers configuration (the expected format of the file is described in this PR as well including examples of the file) * Database records now may include an "origin" (the command added in this PR registers the origin as "external-db"). In the future, it is assumed users may want to be able to treat installs registered with this command differently (e.g. they may want to uninstall all specs added with this command) * Hash properties are now always preserved when copying specs if the source spec is concrete * I don't think the hashes of installed-and-concrete specs should change and this was the easiest way to handle that * also specs that are concrete preserve their `.normal` property when copied (external specs may mention compilers that are not registered, and without this change they would fail in `normalize` when calling `validate_or_raise`) * it might be this should only be the case if the spec was installed - [x] Improve testing - [x] Specifically mark DB records added with this command (so that users can do something like "uninstall all packages added with `spack read-external-db`) * This is now possible with `spack uninstall --all --origin=external-db` (this will remove all specs added from manifest files) - [x] Strip variants that are listed in json entries but don't actually exist for the package
2022-04-28Add checksum for py-poetry-core@1.0.8 (#30359)Andrea Valenzuela1-0/+1
Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch>
2022-04-28Add checksum for py-more-itertools@8.12.0 and fix python dependency (#30325)Andrea Valenzuela1-0/+3
* Add checksum for py-more-itertools@8.12.0 and fix python dependency * Package version 8.11.0 is the only version that requires python 3.6+ Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Add reference to python 3.6 dependency Co-authored-by: aandvalenzuela <andrea.valenzuela.ramirez@cern.ch> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-04-28py-quantities: add versions from 0.12.2-13.0 (#28586)Andrew Davison1-2/+19
* py-quantities: add versions from 0.12.2-13.0 * Attempt to fix the version specification * add maintainer, implement suggestions from reviewer
2022-04-28Ascent/Conduit: re-add fortran compiler that was mistakenly removed (#30351)Chris White2-0/+5
2022-04-27Add spiral fftx (#28583)Patrick Broderick7-45/+244
* add fftx package; rename spiral to spiral-software and add spiral-package-* * Update year in copyright notice * Add package description to FFTX/package.py * Changes to package files for SPIRAL & FFTX for PR * Update package definitions * remove unnecessary lines
2022-04-27Add HDF5 version 1.12.2. (#30348)Larry Knox1-0/+1
2022-04-27llvm: Add 14.0.1 14.0.2 (#30347)Paul R. C. Kent1-0/+2
2022-04-28Add Python `chmod +x` equivalent in `fpm` package (#30342)Wileam Y. Phan1-1/+9
2022-04-27z3: New version 4.8.16 (#30328)Erik Schnetter1-0/+2
2022-04-27tcsh: add version 6.24.00 (#30346)dlkuehn1-0/+1
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>
2022-04-27hiop: Enable barebones testing (#30313)Asher Mancinelli1-0/+37
* Enable barebones testing Run 6 test cases representative of the entire HiOp test suite. * Apply style changes * Dont use unpacking for py2 compat
2022-04-27armpl: add new package (#30305)Annop Wongwathanarat1-0/+179
Co-authored-by: Annop Wongwathanarat <annop.wongwathanarat@arm.com>
2022-04-27orthofinder: add version 2.5.4 (#30344)dlkuehn1-0/+1
Co-authored-by: David Kuehn <las_dkuehn@iastate.edu>