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2023-08-14Windows: executable/path handling (#37762)markus-ferrell2-7/+7
Windows executable paths can have spaces in them, which was leading to errors when constructing Executable objects: the parser was intended to handle cases where users could provide an executable along with one or more space-delimited arguments. * Executable now assumes that it is constructed with a string argument that represents the path to the executable, but no additional arguments. * Invocations of Executable.__init__ that depended on this have been updated (this includes the core, tests, and one instance of builtin repository package). * The error handling for failed invocations of Executable.__call__ now includes a check for whether the executable name/path contains a space, to help users debug cases where they (now incorrectly) concatenate the path and the arguments.
2023-08-14fuse-overlayfs needs pkgconfig to build (#39431)Bryan Herman1-0/+1
2023-08-14xyce: Disable CMake test for OneAPI (#39429)Paul Kuberry2-0/+42
2023-08-14Windows: enable "spack install" tests (#34696)markus-ferrell3-31/+73
* The module-level skip for tests in `cmd.install` on Windows is removed. A few classes of errors still persist: * Cdash tests are not working on Windows * Tests for failed installs are also not working (this will require investigating bugs in output redirection) * Environments are not yet supported on Windows overall though, this enables testing of most basic uses of "spack install" * Git repositories cached for version lookups were using a layout that mimicked the URL as much as possible. This was useful for listing the cache directory and understanding what was present at a glance, but the paths were overly long on Windows. On all systems, the layout is now a single directory based on a hash of the Git URL and is shortened (which ensures a consistent and acceptable length, and also avoids special characters). * In particular, this removes util.url.parse_git_url and its associated test, which were used exclusively for generating the git cache layout * Bootstrapping is now enabled for unit tests on Windows
2023-08-14fixed build of libfuse need werror (#39430)Bryan Herman1-0/+2
2023-08-14trilinos@14.4.0 +kokkos: use external kokkos (#39397)eugeneswalker1-0/+19
2023-08-14Fix style issues with latest versions of tools (#39422)Massimiliano Culpo3-7/+2
2023-08-14Add Boost 1.83.0 (#39415)Mikael Simberg1-0/+1
2023-08-14Add patch to build silo on nixos (#39375)Mikael Simberg2-0/+27
Change the shebang in mkinc from /usr/bin/perl to /usr/bin/env perl for portability to systems that don't necessarily have perl in /usr/bin. Also adds perl as a build-time dependency.
2023-08-14Add fmt 10.1.0 (#39413)Mikael Simberg1-0/+1
2023-08-14mold: add v2.0.0 (#39416)Mikael Simberg1-0/+1
2023-08-14Added package for the hipTT library (#39388)Brian Van Essen3-0/+54
2023-08-14dd4hep: new version 1.26 (#39230)Wouter Deconinck1-0/+17
Release notes: https://github.com/AIDASoft/DD4hep/releases/tag/v01-26 Diff: https://github.com/AIDASoft/DD4hep/compare/v01-25-01...v01-26 Relevant changes: - updated requirements on cmake, - can now support compressed hepmc3. --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-08-14arrow: fix conditional spec expression (#38212) (#38213)Pariksheet Nanda1-1/+1
2023-08-14wrf: add v4.5.1 (#39291)Hao Lyu1-0/+5
2023-08-14gromacs: add plumed 2.8.3-2.9.0 variants (#39411)Audrius Kalpokas1-30/+33
2023-08-14py-scikits-odes: add a new package (#39061)Pariksheet Nanda1-0/+52
2023-08-13Python: fix Apple Clang +optimizations build (#39412)Adam J. Stewart1-1/+6
2023-08-13release 0.0.1 py-dlio-profiler-py (#39377)Hariharan Devarajan1-0/+30
2023-08-13py-pyliblzma: remove python2 package (#39399)Wouter Deconinck1-18/+0
Last release 13 years ago, before python 3.2 was released. No depedendents or next of kin could be located.
2023-08-12bazel: pretty print is all but pretty (#35963)Harmen Stoppels7-50/+1
* bazel: pretty print is all but pretty * Don't ask bazel to explain what it's up to
2023-08-12Allow static-only openssl on Linux (#38098)Alex Richert1-5/+16
2023-08-12usalign: update checksum (#39400)snehring1-1/+1
2023-08-12adios2: add mgard variant (#39405)Vicente Bolea1-0/+2
2023-08-12cernlib: new variant shared (#39406)Wouter Deconinck1-1/+3
This allows users to install cernlib with static libraries only, instead of both static and shared.
2023-08-12lammps: new stable versions, deprecate older patch versions (#39317)Richard Berger1-10/+49
2023-08-12Python: remove maintainer (#39384)Adam J. Stewart1-1/+1
2023-08-11WarpX 23.07 (#39108)Axel Huebl3-34/+11
* WarpX 23.07 Update WarpX and related Python packages to the lastest releases. * py-picmistandard: refresh hashes Keeping even a single `git` version in here confuses the fetcher. Remove broken old versions. * Remove `py-warpx` versions with broken PICMI
2023-08-11py-cryptography: does not run-depend on py-setuptools-rust (#39386)Wouter Deconinck1-1/+2
* py-cryptography: does not run-depend on py-setuptools-rust * py-cryptography: depens_on py-setuptools-rust when @3.4.2: Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-cryptography: re-add depends_on type=run for narrow range --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-08-11ncl: add support for grib (#39277)Alex Richert2-4/+53
Co-authored-by: Alex Richert <alexander.richert@noaa.gov>
2023-08-11kokkos: rename 'std' variant to 'cxxstd'. (#39319)Cristian Di Pietrantonio3-15/+16
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-11qt: fedora patch missing includes in qtlocation (#38987)Melven Roehrig-Zoellner1-0/+9
2023-08-11GDAL: fix supported versions of HDF5 (#39378)Adam J. Stewart1-1/+4
2023-08-11essl: add +lapackforessl variant (#39362)William R Tobin1-1/+10
2023-08-11sgpp: fix build issues (#39086)Gregor Daiß2-19/+44
* fix(sgpp): Fix installation phase scons args * fix(sgpp): Workaround for distutils deprecation The distutils deprecation warning in Python 3.10 - 3.11 caused problems within the SGpp SConfigure checks by causing failures when looking for Python.h. This commit works around this by adding a patch that simply disables the warning. It also puts limits on the python dependency version until distutils is removed from SGpp. * fix(sgpp): cleanup and simplify * fix(sgpp): Fix style
2023-08-11mpich: fix building with NVHPC (#39082)Sergey Kosukhin2-0/+23
2023-08-10py-flit: add 3.8 and 3.9 (#39307)Yan2-5/+11
2023-08-10Fix conflicts on direct dependencies that don't start with ^ (#39369)Massimiliano Culpo32-59/+61
2023-08-10git: add new versions, deprecated / drop versions (#39368)Harmen Stoppels1-280/+58
Remove git versions deprecated in Spack 0.19
2023-08-10trilinos: fix @13.2: +python (#39370)ddeeptimahanti1-1/+1
2023-08-10intel-oneapi-mkl: linking with the +cluster variant is broken for external ↵William R Tobin1-4/+19
mkl (#39343) * Update package.py Adding `mpi` variant to deal with external oneapi-mkl usage per #38238. * style conformance * accept both mpi specification mechanisms * style conformance * Update package.py * Update var/spack/repos/builtin/packages/intel-oneapi-mkl/package.py Co-authored-by: Robert Cohn <rscohn2@gmail.com> * rename mpi variant mpi_family * style conformance * update help message for mpi_family --------- Co-authored-by: Robert Cohn <rscohn2@gmail.com>
2023-08-10mpich: fix macos problem with -flat-namespace (#35611)Alberto Invernizzi1-12/+4
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-08-10Add LLVM_ENABLE_RTTI option to llvm-amdgpu package, required by mesa. (#35655)Nicholas Sly1-0/+1
2023-08-10Remove qt variant in cmake (#39360)Harmen Stoppels1-9/+1
`cmake+qt` depends on `qt`, which depends on `libmng`, which is a CMake package, and has been for 4 years. Nobody ever complained about `cmake+qt` not concretizing... so why pay the solve cost. Before: ``` setup 3.779s load 0.018s ground 2.625s solve 4.511s total 11.236s ``` After: ``` setup 3.734s load 0.018s ground 0.468s solve 0.560s total 5.080s ```
2023-08-10ncview: change URL for source code (#39321)Cristian Di Pietrantonio1-1/+7
Co-authored-by: Cristian Di Pietrantonio <cdipietrantonio@pawsey.org.au>
2023-08-09edm4hep: add edm4hep to PYTHONPATH (#38407)Juan Miguel Carceller1-0/+3
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-08-09picard: add variant with jvm arguments (#39204)pabloaledo2-1/+76
* picard: add variant with jvm arguments * fix variant and update wrapper script --------- Signed-off-by: Pablo <pablo.aledo@seqera.io>
2023-08-09libhio: package update for new sha256 checksum for v1.4.1.5 (#38696)Jennifer Green1-1/+1
2023-08-09emacs: Add v29.1 (#39147)Alec Scott1-0/+1
2023-08-09AMReX: 23.06+ Multi-Dim Support (#37695)Axel Huebl1-1/+16
* AMReX: 23.06+ Multi-Dim Support This updated the Spack package to allow to install AMReX, modules of AMReX in E4S deployments and dependent packages with support for multiple dimensions. Due to an upstream change in AMReX, we do not longer need to ship three, binary incompatible package variants. * [E4S] oneAPI AMReX < 23.06 Variant Work-around the auto-concretization to the multi-dim of `dimensions`, which only in 23.06+ became a multi-variant. * e4s cray rhel ci: temporarily disable amrex build until spurious ci failure can be resolved --------- Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>