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This PR implements several refactors requested in #11373, specifically:
- Config scopes are used to handle builtin defaults, command line overrides
and package overrides (`parallel=False`)
- `Package.make_jobs` attribute has been removed; `make_jobs` remains
as a module-scope variable in the build environment.
- The use of the argument `-j` has been rationalized across commands
- move '-j'/'--jobs' argument into `spack.cmd.common.arguments`
- Add unit tests to check that setting parallel jobs works as expected
- add new test to ensure that build job setting is isolated to each build
- Fix packages that used `Package.make_jobs` (i.e. `bazel`)
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Lmod version 8.1.5
Lua version 5.3.5
Lua Filesystem 1.7.0.2
Turned tcl to a link dependency so that Lmod's configure can find it.
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* Add latest version of py-cython
* Fix cython unit tests
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* package vtk - improve gl handling
* package vtk - minor cleanup
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disable symengine constraints due to limitations of Spack
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* When fabrics=auto or schedulers=auto, the intent is to defer to the
OpenMPI configure and let it determine and use what it finds
available on the system. The current behavior for 'with_or_without'
in the case of 'auto' explicitly disables all possible values.
This updates the logic to call 'with_or_without' only when the
value of fabrics/schedulers is not 'auto'.
* To allow explicitly disabling all fabrics/schedulers, each of these
variants has added support for 'none' (which is also the default
value).
* Add a conflict for the loadleveler scheduler for openmpi-3 and
above as it is no longer a valid configure option.
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* Update optional-lite and span-lite to use CMakePackage
These packages only have CMake installs on their most recent versions.
Therefore, we overload all of the CMake stages to fallback to the old
versions (no-op for most, copytree for install), and use CMakePackage on
the new versions.
* Add new string-view-lite version with CMake install support
* Only override phases for old versions of *-lite packages
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* Update Umpire package with new versions
* Fix version ordering
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* trilinos: add variant to disable chaco from seacas
keep it OFF by default due to the presence of the global symbol "divide"
that can lead to symbol clash with other libraries, for example see
https://github.com/dealii/dealii/issues/8170#issuecomment-492700787
* dealii: add conflict statement for adol-c and Trilinos SEACAS Chaco
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* dyninst: rework the cmake args for version 10.1 and later
Add a separate when() case for the cmake args for Dyninst 10.1.0 and
later. The prereq args have changed enough that this makes things
easier going forward. (My previous commit 26b9369c was inaccurate and
temporary.)
Dyninst 10.1.0 accepts boost 1.70, but earlier dyninst are restricted
to <= 1.69 (not worth back porting every boost change).
Change all the dyninst versions to 3 digits for clarity and
consistency.
* Add version 10.1.0.
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* Add QMCPACK 3.7.0
* SOA is now the default.
* Add QMCPACK converter based on QE 6.4
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(#11499)
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* added patch for intel-tbb@2019.1: with old compilers
* sparately specify when @:2018 and @2019
the reason we can't say @:2019 is that would include @2019.1 where the
patch doesn't work.
* should be possible to list when constraint as @:2019
According to my reading of ["Version ranges" in the Spack
docs](https://spack.readthedocs.io/en/latest/packaging_guide.html#version-ranges),
this should apply to up to `2019` but not `2019.1:`
* @:2019.0 appears to be necessary to specify 2019 but not 2019.1
* specifying 2019.1 2019.2 2019.3 2019.4 separately and explcitly
* flake8 fixes for long lines.
* add comments to explain why so many different patch directives
* remove blank like for flake8
* revert spec %gcc@4.8.0:4.99999 -> %gcc@4.8.0:
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* py-pybedtools: new package at 0.6.9
* py-pybedtools: add bedtools2 dep
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- CMake is built *very* frequently, and the number of dependencies it has
accumulated can take a very long time on some systems.
- Use +ownlibs by default to avoid the build overhead. This won't
interfere with other packages by introducing conflicting libraries, as
CMake is nearly always a build dependency.
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This avoids using Boost 1.70.0, fixes library access in OpenSpeedShop
packages, adds new versions, and updates QT dependency constraints
in CBTF and OpenSpeedShop packages
- Constrain Boost dependency to 1.69.0 or earlier to avoid issues
with 1.70.0 for Open|SpeedShop and CBTF packages
- Update DYNINSTAPI_RT_LIB environment variable to use single library
from "find_libraries" (which returns a list) in OpenSpeedShop
packages
Fixes #11443
- Add version 1.9.3 for CBTF Argo Navis, CBTF Krell, CBTF LANL, and
CBTF packages
- Add version 2.4.1 for OpenSpeedShop Utils and OpenSpeedShop
packages
- Update QT dependency to 5.10.0 or greater for QtGraph and CBTF Argo
Navis packages
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This makes several changes to make CDO work with gcc@9:
- Add version 1.9.7rc2
- Add a patch to make version 1.9.7rc2 build with gcc@9:
- Add a conflict with GCC 9 for earlier versions of CDO
It also adds a pkgconfig build dependency as configure checks for it.
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* Use externally provided mpi4py
* Make mpi4py and numpy both build deps instead of only run deps
* libxt is only on ~osmesa platform=linux
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* Update flecsi package.py
* Update package.py
* Update package.py
* Update package.py
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* repeatscout: new package at 1.0.5
* repeatscout: add trf runtime dependency
* repeatscout: add nseg runtime dependency
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