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2020-03-26catch2: added versions up to v2.11.3 (#15680)Andrew Gaspar1-0/+8
2020-03-26ppOpen-Math/VIS: added new package (#15665)Toyohisa Kameyama1-0/+45
2020-03-26kmod: added package at v27 (#15633)darmac1-0/+30
2020-03-25med package: add version 4.0.0 (#15652)gauthier121-2/+4
2020-03-25OpenJDK: add version 8u222 (#15677)iarspider1-0/+2
2020-03-25darshan-util and darshan-runtime: add version 3.1.8 (#15681)Carson Woods2-0/+2
2020-03-25UPC++ 2020.3.0 update (#15623)Dan Bonachea1-9/+100
## Summary This PR updates and improves the Spack package for [UPC++](https://upcxx.lbl.gov). I'm an LBL employee and developer on the UPC++ team, as well as the maintainer of this Spack package. ### Key Improvements: * Adding new 2020.3.0 release and support for use of develop/master branches - Our build infrastructure underwent a major change in this release, switching from a hand-rolled Python2 script to a bash-based autoconf work-alike. - The new build system is NOT using autotools (nor does it support some of the more esoteric autoconf options), but the user interface for common builds is similar. * Add explicit support for an MPI optional dependency - New `mpi` variant enables use of the MPI-based spawner (most relevant on loosely coupled clusters), and the (unofficial) mpi-conduit backend - This variant is OFF by default, since UPC++ works fine without MPI on many systems, increasing the likelihood first-time Spack users get a working build without needing to correctly setup MPI * Add support for post-install testing using the test support deployed in the new build infrastructure * Fix or workaround a few bugs observed during testing ### Status The new package has been validated with a variety of specs across over seven different systems, including: NERSC cori, ALCF Theta, OLCF Summit, an in-house Linux cluster, and macOS laptops (Mojave and Catalina).
2020-03-25WarpX: MPI, Backends, Ascent (#15647)Axel Huebl1-20/+45
Expose serial/parallel build (MPI), CUDA/OpenMP backends, Clang, and Ascent bindings. Interestingly, `warpx +ascent` currently leads to an infinite loop in the Spack concretizer.
2020-03-25openPMD-api: added v0.11.1 (#15659)Axel Huebl1-0/+1
Add the latest release with HDF5-1.12 compatibility.
2020-03-25mothur: specify version of vsearch (#15661)xfzhao1-1/+1
2020-03-25gitconddb: new package at v0.1.1 (#15651)Ben Morgan1-0/+43
Git-based conditions database for HEP and other experiments. Use latest release version and current master to support Linux and macOS. Add core known dependencies and conflicts related to C++17 support. cxxstd variant added to help transitive dependencies, and for future support for newer standards in future.
2020-03-25ACTS: added v0.19 (#15671)Hadrien G1-0/+1
2020-03-25pocl: add versions up to v1.4.0 (#15672)Sinan1-0/+6
Co-authored-by: Sinan81 <sbulut@3vgeomatics.com>
2020-03-25julia: added v1.4.0 (#15673)Jeffrey Salmond1-0/+1
2020-03-25libwebp: fix sha256 checksum (#15639)darmac1-1/+1
2020-03-24xz: add version 5.2.5 (#15656)Stephanie Brink1-1/+2
2020-03-24charmpp: add version 6.10.1+cleanupsMatthias Diener1-2/+4
- change URL to http as our server only supports TLSv1.0, which not all HTTPS clients accept anymore - change name of development branch to 'master'
2020-03-24pmix: add version 2.2.3 (#15668)Carson Woods1-0/+1
2020-03-24singularity: add version 3.5.3 (#15669)Carson Woods1-0/+1
2020-03-24workaround for otf2's erroneous python2 configure requirement (#15653)eugeneswalker1-1/+2
2020-03-24r-remotes: added v2.1.1 (#15627)Amjad Kotobi1-1/+2
2020-03-24py-onnx: remove_dllexport_decl. (#15648)Tomoki, Karatsu2-0/+14
2020-03-23automake: Add 1.16.2Michael Kuhn1-0/+1
2020-03-23py-ics: add version 0.7Andreas Baumbach1-0/+1
2020-03-23CMake: add version 3.9.2 (#15644)Carson Woods1-0/+1
2020-03-23lmod: add version 7.8.1 (#15643)Carson Woods1-0/+1
2020-03-23xsdk-examples: add new package at version 0.1.0 (#15621)Piotr Luszczek1-0/+39
* xsdk-examples: add new package at version 0.1.0
2020-03-22NCCL: add 1.2.2 (#15628)Adam J. Stewart1-1/+4
2020-03-21WarpX: Update ES and openPMD (#15611)Axel Huebl1-15/+10
Update WarpX for recent developments: - add openPMD I/O (default: ON) - remove electro-static solver option (now a runtime option) - enable tiny profiler by default - depend on new CXX std support in make scripts for C++14 - WarpX only supports 2D and 3D in cartesian dims
2020-03-21davix: add cxxstd variant (#15593)Ben Morgan1-0/+11
* davix: add cxxstd variant Davix is written in C++, so add this variant to allow dependents to specify this so a consistent ABI is used. * davix: fix flake8 errors
2020-03-21bash: add patches up to 5.0.16 (#15615)Adam J. Stewart1-0/+5
2020-03-21Fix bug in py-dgl installation, add unit tests (#15617)Adam J. Stewart1-2/+36
2020-03-21add new package: nfs-ganesha (#15580)darmac1-0/+29
* add new pacakge: nfs-ganesha * refine package.py * update bison & flex as build depends
2020-03-20py-torchtext: add new package (#15604)Adam J. Stewart1-0/+24
2020-03-20freeipmi: Initial commit (#15576)Matthias Maiterth1-0/+40
* freeipmi: Initial commit Added freeipmi package. Configure and build work fine, install only as root, thus added warning and added reference to issue #4432 . * freeipmi: fixed change requests
2020-03-20Add gmsh v4.5.4 with new options (#15591)Benjamin Fovet1-2/+15
* Add gmsh v4.5.4 with new options This adds OpenCASCADE as an alternative to the oce package. A new variant 'privateapi' is added to enable the gmsh private API. * Make oce conflict with opencascade in gmsh
2020-03-20Add Ceres Solver v1.14.0 with new variants (#15597)Benjamin Fovet1-2/+21
* Add Ceres Solver version 1.14.0 * Add variants for Ceres Solver
2020-03-20Add 33.2.1 version with checksum to lua-luaposix (#15600)Carson Woods1-0/+1
2020-03-20py-sentencepiece: add new package (#15601)Adam J. Stewart1-0/+24
2020-03-20Add version 5.8 and fix sqlite+column_metadata mismatch. (#15450)Dan Lipsa3-3/+3
2020-03-20tau: add dependency on hwloc (#15589)eugeneswalker1-0/+1
2020-03-20sentencepiece: add new package (#15596)Adam J. Stewart1-0/+20
2020-03-20py-dgl: add new package (#15594)Adam J. Stewart1-0/+94
2020-03-20Add NLopt version 2.6.1 (#15595)Benjamin Fovet1-0/+1
2020-03-20papi: add version 6.0.0 (#15590)Kevin Manalo1-0/+1
2020-03-20root: Add version 6.20.{00,02} (#15487)Dr. Christian Tacke1-4/+17
* Add version 6.20.{00,02}, don't yet mark it preferred * It needs zstd * It needs numpy (at least for 6.20.00:6.20.03) * Reorder python dependencies a bit * Add mlp variant, default False Older versions always include mlp, so no conflicts there. * Disable tmva, because it needs mlp * tmva needs mlp, so add conflict
2020-03-20Added two new versions of spdlog (#15586)Matthieu Dorier1-0/+2
2020-03-20add new package: glusterfs (#15565)darmac1-0/+44
* add new package: glusterfs * fix list_depth for url * remove list_depth * add list_url for glusterfs
2020-03-20add new package lksctp-tools (#15564)darmac1-0/+20
Co-Authored-By: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-03-20py-decorator: added v4.4.2 (#15581)Adam J. Stewart1-1/+2
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