summaryrefslogtreecommitdiff
path: root/var
AgeCommit message (Collapse)AuthorFilesLines
2018-03-07py-gpaw package with variants for MPI, FFTW and ScaLAPACK (#7373)simo-tuomisto2-0/+108
2018-03-07Relion 2.1 - Using CudaPackage class (#6707)Douglas Duckworth1-11/+7
2018-03-07lammps: add version 20180222 (#7408)Christoph Junghans1-0/+1
2018-03-06minighost: rework link logic (#7402)Christoph Junghans1-5/+3
2018-03-06adds patches required to build hdf5 1.8.10 (#7386)Mike Pozulp2-0/+56
For hdf5 `1.8.10` and some compilers, the hdf5 build system adds the '-ansi' flag. hdf5 1.8.10 is not actually ansi compliant so this adds a patch to modify the places where it violates ansi compatibility (which ends up being a few comments).
2018-03-06bowtie2: Add version 2.3.4.1 (#7252)Eric1-1/+2
2018-03-06pnmpi@1.7: new package (#7051)Geoffrey Oxberry1-0/+67
Add PnMPI, a dynamic MPI tool infrastructure that builds on top of the PMPI interface.
2018-03-06Add the libssh2 variant for curl. (#6980)健美猫1-0/+3
2018-03-06perl-net-scp-expect: Create new package (#7028)Eric1-0/+34
2018-03-06gromacs: add v2018 (#7050)Christoph Junghans1-0/+2
2018-03-06Update package.py (#7327)Simon Flood1-3/+8
Add versions released after 3.5.0 (3.4.3, 3.5.1, and 3.6.x)
2018-03-06py-crossmap: adding new package (#7108)peetsv1-0/+39
2018-03-06Setup dependent environment for pkgconf. (#7102)Sergey Kosukhin1-0/+13
2018-03-06py-rasterio: Added with dependencies. (#7156)Elizabeth Fischer4-0/+171
2018-03-06sosflow: add missing dependencies (#7182)Geoffrey Oxberry1-0/+2
SOSflow depends on MPI and pkg-config, but neither of these dependencies are currently in the spack package, so this commit adds them.
2018-03-06Add cmor version 3.3.0 (#7197)Paschalis Korosoglou1-1/+2
2018-03-06perl-graph-readwrite: Create new package (#7284)Eric1-0/+34
2018-03-06Add sqlite 3.22.0 (#7335)mcneish11-0/+2
2018-03-06Fix apr pick up of log4cxx (#7347)healther1-1/+4
2018-03-06likwid: Fix build (#7244)Michael Kuhn1-0/+2
likwid uses the current directory when building the paths to its internal libraries. Spack overwrites PWD, causing likwid to not find hwloc.h.
2018-03-06mumps: add the libs property (#7264)Veselin Dobrev1-0/+8
2018-03-06Make neuron package more generic (#7393)Ricardo Silva1-39/+36
Make neuron package more generic * find the bin directory dynamically for use in run_env and spack_env * replace filter_compilers after install with filter_compiler_wrappers * update checksum for _current_ 7.5 version * make +python conflict with ~shared * prepend the architecture specific lib directory to the LD_LIBRARY_PATH Signed-off-by: Ricardo Silva <ricardo.silva@epfl.ch>
2018-03-06Colordiff: new package (#7070)Matthias Diener1-0/+40
2018-03-06py-bitstring: Create new package (#7190)Eric1-0/+34
2018-03-06suite-sparse: add a package-specific 'libs' property (#7269)Veselin Dobrev1-1/+20
2018-03-06trnascan-se: new package (#7351)Yifan Zhu1-0/+34
2018-03-06libSplash 1.7.0: Root Fix (#7368)Axel Huebl2-0/+17
Fix installs as "root" user for the last libSplash release. Missing quoting of string compares resulted in a CMake error when run as root (e.g. in a Docker build).
2018-03-06snpEff: Create new package. (#7382)lingnanyuan2-0/+61
2018-03-06mosh build depends on pkg-config (#7365)Eric Müller1-0/+1
2018-03-06perl-file-slurper: Create new package (#7378)Eric1-0/+34
2018-03-06exasp2: add v1.0 (#7398)Christoph Junghans1-0/+2
2018-03-06braker: added list_url (#7058)Yifan Zhu1-0/+1
2018-03-05r-sf: new package (#6547)Yifan Zhu1-0/+47
* r-sf: new package * r-sf: added version requirements for dependencies
2018-03-05minighost: another Ubuntu fix (#7359)Christoph Junghans1-1/+1
2018-03-05minismac2d: fix build with external Debian MPI (#7318)Christoph Junghans1-1/+1
2018-03-05perl-extutils-depends: Create new package (#7376)Eric1-0/+34
2018-03-05rapidjson: new package (#7391)Federico Ficarelli1-0/+37
2018-03-05Fix pkgconf on Crays (#7171)Mario Melara1-5/+0
This updates Cray.setup_platform_environment to use cray-specific pkgconfig paths so that all providers of 'pkgconfig' have access to them (previously the 'pkg-config' provider had this but the 'pkgconf' provider did not).
2018-03-05Fix version-specific URLs for Python packages (#7394)Adam J. Stewart2-3/+3
2018-03-05openmpi: add package-specific 'headers' property (#7267)Veselin Dobrev1-0/+7
* [OpenMPI] Add the 'headers' property. This removes some redundant headers from sub-directories, returned by the default '.headers' handler. * [OpenMPI] In the .headers property, add a fallback to search all of prefix for the mpi.h header. Recommended by @junghans to support some external configurations, see #7268.
2018-03-05tclap: new package (#7390)Federico Ficarelli1-0/+35
2018-03-05bracken: Create new package (#7375)Eric1-0/+75
2018-03-05add -ldl to silo ldflags when building with static hdf5 in order to fix ↵Mike Pozulp1-0/+5
#7384 (#7385)
2018-03-05update for conduit 0.3.1 release (#7344)Cyrus Harrison1-10/+15
2018-03-05fix ruby build on gcc >= 7 (#7387)Eric Müller3-0/+170
* pkgconfig fixes a "libffi.a requires -fPIC" build error * the patches solve the mentioned problem on GCC 7.x
2018-03-01Rsync package: Fix Src Link (#7367)Axel Huebl1-1/+1
Fix the source link to rsync downloads. The old link only contained the latest release, the new link contains all.
2018-03-01new package: hiop (#7039)junkudo1-0/+75
2018-03-01new package: perl-parallel-forkmanager (#7049)Eric1-0/+34
2018-02-28help gdb pick up python3 (#7104)healther1-8/+8
* Update gdb to autotools package * Help gdb find python libraries for python 3
2018-02-28mpich@develop: needs git submodules (#7357)Omri Mor1-1/+1