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No changes to the build system, no changes to `package.py` needed.
Changelog: https://github.com/qt/qtbase/compare/v5.15.9-lts-lgpl...v5.15.10-lts-lgpl
Main change taking up space:
- bundled 3rdparty/pcre2 updated from 10.39 to 10.40 (spack now includes 10.42, and we don't put specific version requirements in `package.py`)
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(#38297)
* hpx: Add conflict with some GCC versions and +rocm due to valarray bug
https://gcc.gnu.org/bugzilla/show_bug.cgi?id=103022
* remove conflict for %gcc@11.1.0 since there is none
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Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
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* py-networkx: add 3.1
* Update var/spack/repos/builtin/packages/py-networkx/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add default variant
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Not sure why flake8 didn't catch this as an undefined name, e.g. https://www.flake8rules.com/rules/F823.html.
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Co-authored-by: Ben Morgan <drbenmorgan@users.noreply.github.com>
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No changes required to the geant4 package.py file.
Changes: https://gitlab.cern.ch/geant4/geant4/-/compare/v11.1.1...v11.1.2
Release notes: https://geant4.web.cern.ch/download/release-notes/notes-v11.1.2.txt
Co-authored-by: Ben Morgan <drbenmorgan@users.noreply.github.com>
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* tests/py-chainer: convert to new stand-alone test process
* py-chainer: add skip_modules entry for onnx_chainer
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* py-pycairo: add 1.24.0
* Change python dependency to 3.8
* Remove upper bound for python dependency
* Update var/spack/repos/builtin/packages/py-pycairo/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* tetranscripts: new package @2.2.3
* tidying up
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* add darshan 3.4.3 releases
* darshan-runtime 3.4.3
* darshan-util 3.4.3
* py-darshan 3.4.3.0
- add py-humanize as new dependency
* py-darshan has strict darshan-util version reqs
darshan-util version required is based on the first 3 parts of
the py-darshan version string
* remove support for python3.6
* py-humanize dependency for 3.4.3+ versions
* only enforce scipy dependency for 3.4.0.1
* drop optional lxml dependency
* drop matplotlib pinning
* importlib-resources not a dep in python-3.7+
* drop unnecessary numpy pin
* add build dep for pytest-runner
* fix typo in pytest-runner package name
* pip setuptools to match pydarsan setup.py
* spack style fix
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* py-gsutil: add 5.24, fix and add dependencies
* Update var/spack/repos/builtin/packages/py-httplib2/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Add httplib2@0.20.4 and pin it in py-gsutil
* Add py-cryptography conflict
* Update var/spack/repos/builtin/packages/py-httplib2/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* py-pyopenssl: fix py-cryptography conflict
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* mpich: undefined variable dso_suffix
* mpich: formatting
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Co-authored-by: Nichols A. Romero <naromero77@users.noreply.github.com>
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* py-lightly: add v1.4.8
* Fix typo
* Update deps as well
* typing-extensions dep needed earlier
Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
* Runtime dep on setuptools removed in master
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Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
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* py-psutil: add 5.9.5
* Remove unneeded windows dependencies
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* py-bulker: new package at 0.7.3
* bulker: renaming package
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* update mda and mdatests
* black
* Update var/spack/repos/builtin/packages/py-mdanalysis/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-mdanalysis/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* polish
* Update var/spack/repos/builtin/packages/py-mdanalysistests/package.py
* fixes
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* superlu: convert to new stand-alone test process
* Bugfix/superlu: add BaseBuilder and move post-install work to it
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`FFLAGS` and `FCFLAGS` are being ignored by WRF build system. Not only in version
`3.9.1.1`, but also `4.x`.
Also, I see no reason to explicitly add `-w` and `-O2` to compile lines when
using `gcc@10:`. Tested for version `3.9.1.1`, `4.2.2`, & `4.5.0`.
Tagging original authors of this part @MichaelLaufer and @giordano in case they
want to chime in.
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* ncbi-rmblastn: patching to support building with %gcc@13:
* ncbi-rmblastn: patching to build with %gcc@13:
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* py-umi-tools: add 1.1.4, add py-pybktree dependency
* remove python spec
* Remove `six` dependency
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* py-pre-commit: add 3.3.3
* Update var/spack/repos/builtin/packages/py-pre-commit/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* py-nodeenv: add 1.8.0
* Remove python@3.7 restriction
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* py-pkginfo: add 1.9.6
* Remove py-setuptools as run dependency
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Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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* py-vermin: add latest version 1.5.2
* Removed obsolete dep and setuptools is only for build-time
- setuptools are not used as runtime
- py27 isn't strictly necessary
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