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2021-12-17gpi-2: add version 1.3.3 (#27881)Max Zeyen1-8/+9
2021-12-17dolfinx: add ADIOS2 variant (#27540)Adeeb Arif Kor1-0/+4
2021-12-17suite-sparse: fix issues with tbb (#28054)Tom Payerle1-1/+13
* suite-sparse: Fix check for +/- tbb variant Changed 'tbb' in spec to '+tbb' in spec The former would configure suite-sparse to use tbb if any dependency package (e.g. intel-oneapi-mkl) depends on tbb, even if suite-sparse~tbb was specified. * suite-sparse: conflict when trying to use 2021.x versions of tbb See https://github.com/DrTimothyAldenDavis/SuiteSparse/issues/72 suite-sparse depends on task_schedule_init to control the number of threads when e.g. interfacing with MATLAB. However, Intel dropped task_schedule_init in the 2021.x releases of TBB (it has been deprecated since TBB 4.3.5). We just raise a spack conflict when using tbb @2021.x and +tbb Because tbb is a virtual package and is not versioned, I have instead checked for either intel-oneapi-tbb@2021: or intel-tbb@2021:, not the most elegant but should do the job * suite-sparse: fix style issues
2021-12-17r-viridislite: add 0.4.0 (#27872)Manuela Kuhn1-2/+2
2021-12-17bridger: fixing issues with newer compilers (#28008)snehring1-0/+8
2021-12-17libcxxwrap-julia: fix the git branch name master -> main (#28033)Drew Whitehouse1-1/+3
2021-12-17py-mypy: add v0.920 (#28034)Adam J. Stewart1-2/+9
2021-12-17Add py-pytorch v1.10.1 and py-pytorchvision v0.11.2 (#28055)Adam J. Stewart2-0/+3
2021-12-17Specify dependencies to py-setuptools@:57.99 for packages using 2to3 (#27777)haralmha3-3/+4
2021-12-17[autodiff] new package for optional dependency of acts (#28028)Wouter Deconinck2-3/+39
2021-12-17[vecmem] new package for optional dependency of acts (#28029)Wouter Deconinck1-0/+48
2021-12-17[acts] depends_on dd4hep +dddetectors (+ddg4 when +geant4) (#27861)Wouter Deconinck1-2/+2
2021-12-17Updated dpcpp package (#27953)ravil-mobile1-7/+23
* Added installation of OpenMP as an option * Added a softlink (dpcpp) to clang++ to mimic the packaged version of dpcpp Co-authored-by: ravil <ravil.dorozhinskii@tum.de>
2021-12-17py-vector: add new package (#28057)iarspider1-0/+24
2021-12-17libtree: add v3.0.1 (#28040)Harmen Stoppels1-0/+1
2021-12-16Additional flags for ROMS (#27951)AMD Toolchain Support1-1/+2
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-16CMake: fix rhash detection (#27944)iarspider1-3/+46
* RHash: update version; create symlink librash.so * Install headers * Flake-8 * Update package.py * Update package.py * Update package.py (#19) * Update package.py * Update package.py * Update var/spack/repos/builtin/packages/rhash/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix installation on macOS Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16hdf5: add version 1.10.8 (#27613)Larry Knox3-3/+65
* Update hdf5/package.py to add HDF5 1.10.8 release and move preferred version from 1.10.7 to 1.10.8. * silo: versions before 4.11 conflict with hdf5 >= 1.10.8. * Add patch file for silo@4.11 with hdf5 1.10 >=1.10.8 and hdf5 1.12 >= 1.12.1.
2021-12-16petsc: enable +rocm+kokkos (#27779)Satish Balay2-3/+29
Also fix kokkos-kernels when kokkos is built with +rocm
2021-12-16rocprofiler-dev package: needs numactl as link dep for tests (#27839)eugeneswalker1-0/+2
2021-12-16New package: py-pynisher (#28052)Jen Herting1-0/+20
* [py-pynisher] created template * [py-pynisher] - Added homepage - Added description - Removed fixmes - added dependencies
2021-12-16OpenMPI Package: add variant for romio (#27897)Howard Pritchard1-0/+4
Add option to disable the internal romio build.
2021-12-16New package: py-scinum (#28041)iarspider1-0/+19
* New package: py-scinum * Update var/spack/repos/builtin/packages/py-scinum/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16wonton package: fix reference error (#27963)Tracy-Pantleo1-1/+1
2021-12-16New package: py-schema (#28039)iarspider1-0/+18
2021-12-16New package: py-shellingham (#28043)iarspider1-0/+19
2021-12-16New version: py-correctionlib 2.1.0 (#28051)iarspider1-0/+1
2021-12-16aocc: add v3.2.0 (#27946)vijay kallesh1-0/+2
Co-authored-by: amd-toolchain-support <toolchainsupport@amd.com>
2021-12-16MANPATH needs a trailing ':' to utilize system defaults (#21682)Andrew W Elble1-0/+1
otherwise spack breaks using system man pages by default. Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-12-16Bugfix: Simplify preferred-test versions; set checksum defaults (#28026)Tamara Dahlgren1-7/+5
* Simplify preferred-test versions; set checksum defaults * Fix test_preferred failure
2021-12-16delly2: updating to v0.9.1 (#28000)snehring1-17/+29
2021-12-16meep: fixed dependencies (#27574)Thomas Green1-10/+28
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-12-16samtools: fixing build issue due to change in 1.14 (#28024)snehring1-5/+8
2021-12-15Fix for OpenFOAM pthread issue for AOCC 3.2 (#27949)AMD Toolchain Support1-0/+12
* Fix for OpenFOAM pthread issue for AOCC 3.2 * addressing the review comments * updating when command for aocc v3.2.0 and above Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-15pcre package: update download URL (#27867)Dennis R Kennetz1-1/+2
* ftp url is dead as stated in the home page. The sha256 is the same in the sourceforge dl. * added myself as a maintainer per spackbot's rec
2021-12-15New package: py-copulas (#27920)Jen Herting1-0/+28
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-15mpitrampoline package: add versions up to 2.8.0 (#27928)Erik Schnetter1-0/+6
2021-12-15py-matplotlib: add v3.5.1 (#27929)Adam J. Stewart1-0/+1
2021-12-15py-pandas: add v1.3.5 (#27930)Adam J. Stewart1-1/+3
2021-12-15assimp package: add version 5.1.3 (#27934)Wouter Deconinck1-0/+1
2021-12-15likwid package: add version 5.2.1 (#27935)Thomas Gruber1-0/+1
2021-12-15ExaGO package: add version 1.2.0; update dependency constraints (#27961)Asher Mancinelli1-8/+6
* PETSc is a core dependency, yet we left a variant for PETSc. This was removed, and ExaGO always depends on PETSc. The CMake arguments were updated accordingly. * camp+cuda is only a dependency when we build with RAJA and CUDA.
2021-12-15opa-psm2 package: add version 11.2.206 (#27968)snehring1-0/+1
2021-12-15RADICAL-Cybertools packages: add versions (#28002)Mikhail Titov3-5/+8
* py-radical-entk: add version 1.9.0 * py-radical-pilot: add version 1.10.1 * py-radical-utils: add version 1.9.1 * py-radical-utils: requires py-pymongo less than version 4
2021-12-15New package: py-trojanzoo-sphinx-theme (#27972)Adam J. Stewart1-0/+20
2021-12-15py-sphinx package: add version 4.3.1 (#27933)Adam J. Stewart1-2/+4
2021-12-15New package: py-pysqlite3 (#28020)iarspider1-0/+26
* New package: py-pysqlite3 * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-15New package: py-prwlock (#28017)iarspider1-0/+17
2021-12-15New package: py-pybrain (#28019)iarspider1-0/+20
2021-12-15New package: py-parsimonious (#28015)iarspider1-0/+18
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