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2024-05-14Add newer fish versions (#44174)Derek Ryan Strong1-0/+5
2024-05-14Add file 5.45 (#44175)Derek Ryan Strong1-0/+1
2024-05-14Add man-db 2.12.0 and 2.12.1 (#44176)Derek Ryan Strong1-0/+2
2024-05-13amr-wind: add latest versions and correct waves2amr details (#44099)Michael B Kuhn1-2/+8
* add latest versions and correct waves2amr details * update commit associated with v2.1.0
2024-05-13fujitsu-mpi package: help CMake find wrappers (#43979)jdomke1-0/+10
Set MPI_C_COMPILER etc. env vars when building with fujitsu-mpi, which override CMake logic. Without using these variables to explicitly request the Fujitsu MPI wrappers, the builtin CMake logic is unwilling to use these wrappers unless the Fujitsu compiler is used, but they should be used for %clang as well. This avoids patching CMake module files like in #16864, primarily to avoid the possibility of altering behavior for specs that do not use %fj or ^fujitsu-mpi.
2024-05-13yosys: add v0.41 (#44153)Dave Keeshan1-0/+1
2024-05-13cdt: Add version 1.4.1 (#44155)Julien Cortial1-0/+1
2024-05-13justbuild: add version 1.3.0 (#44148)Alberto Sartori1-0/+1
2024-05-13nalu-wind: updates (#44046)Jon Rood1-40/+37
2024-05-13gaudi: upstream patch when @38.1 for missing #include <list> (#44121)Wouter Deconinck1-0/+5
* gaudi: upstream patch when @38.1 for missing #include <list> * gaudi: apply list patch for all versions
2024-05-13whip: Add 0.3.0 (#44146)Mikael Simberg1-0/+1
Co-authored-by: Mikael Simberg <simbergm@cscs.ch>
2024-05-12llvm: add 18.1.5, 18.1.4 (#44123)Paul R. C. Kent1-0/+2
2024-05-12R: common package updates for 4.4.0 (#44088)bk6-2/+25
* r-ggplot2: v3.5.1, r-haven: v2.5.4, r-jsonlite: v1.8.8, r-pkgload: v1.3.4, r-vctrs: v0.6.5 * r-scales: v1.3.0
2024-05-12whizard: Add version 3.1.4 (#43045)Juan Miguel Carceller1-1/+3
* whizard: Add a patch to fix builds with pythia8 >= 8.310 * Add whizard 3.1.4 and update accordingly --------- Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-05-12octave: use pcre2 for @8: (#42636)Alex Richert1-1/+6
* octave: use pcre2 for @8: * Add 'pcre2' variant to octave to control pcre vs. pcre2 * Update var/spack/repos/builtin/packages/octave/package.py Co-authored-by: Alec Scott <hi@alecbcs.com> --------- Co-authored-by: Alex Richert <alexander.richert@noaa.gov> Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-05-12fastjet: Add a cxxstd variant (#44072)Juan Miguel Carceller1-0/+13
* fastjet: Add a cxxstd variant * Use f-strings * Add multi=False --------- Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-05-10qpdf: new package (#44066)James Taliaferro1-0/+45
* New package: qpdf * Update var/spack/repos/builtin/packages/qpdf/package.py Co-authored-by: Alec Scott <hi@alecbcs.com> * Fix format of cmake_args --------- Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-05-10New package: py-nuitka (#44079)James Smillie1-0/+24
2024-05-10Windows: Non config changes to support Gitlab CI (#43965)John W. Parent1-4/+17
* Quote python for shlex * Remove python path quoting patch * spack env: Allow `C` "protocol" for config_path When running spack on windows, a path beginning with `C://...` is a valid path. * Remove makefile from ci rebuild * GPG use llnl.util.filesystem.getuid * Cleanup process_command * Remove unused lines * Fix tyop in encode_path * Double quote arguments * Cleanup process_command * Pass cdash args with = * Escape parens in CMD script * escape parens doesn't only apply to paths * Install deps * sfn prefix * use sfn with libxml2 * Add hash to dep install * WIP * REview * Changes missed in prior review commit * Style * Ensure we handle Windows paths with config scopes * clarify docstring * No more MAKE_COMMAND * syntax cleanup * Actually correct is_path_url * Correct call * raise on other errors * url2path behaves differently on unix * Ensure proper quoting * actually prepend slash in slash_hash --------- Co-authored-by: Ryan Krattiger <ryan.krattiger@kitware.com> Co-authored-by: Mike VanDenburgh <michael.vandenburgh@kitware.com>
2024-05-10dd4hep: cleanup recipe, remove deprecated versions and patches (#44110)Juan Miguel Carceller3-123/+1
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-05-10edm4hep: cleanup recipe, remove deprecated versions and patches (#44113)Juan Miguel Carceller2-86/+3
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-05-10libtheora: Remove unneeded autoreconf section (#44063)Chris Marsh1-6/+0
* Remove autoreconf section that was causing issues with libtool mismatch. Fixes issue #43498
2024-05-10dla-future: Add 0.4.1 (#44115)Mikael Simberg1-0/+3
* dla-future: Add 0.4.1 * Use ninja as generator in dla-future
2024-05-10pika: Add 0.25.0 (#44114)Mikael Simberg1-0/+2
2024-05-10libhugetlbfs: Fix the build with an update to 2.24 (#44059)Stephen Sachs1-5/+15
Co-authored-by: Stephen Sachs <stesachs@amazon.com> Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-05-09flux-sched: set the version if the ver file is missing (#44068)Tom Scogland1-0/+4
* flux-sched: set the version if the ver file is missing problem: flux-sched needs a version, it normally gets this from a release tarball or from git tags, but if using a source archive or a git clone without tags the version is missing solution: set the version through cmake based on the version spack sees when the version file is missing * Update var/spack/repos/builtin/packages/flux-sched/package.py Co-authored-by: Alec Scott <hi@alecbcs.com> --------- Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-05-09miniforge3: add new versions with mamba installation (#43995)Christopher Christofi1-39/+52
* miniforge3: add new version with mamba installation * fix styling * update maintainers * Fix variant directive ordering
2024-05-09Fix filtering external specs (#44093)Massimiliano Culpo1-0/+16
When an include filter on externals is present, implicitly include libcs. Also, do not penalize deprecated versions if they come from externals.
2024-05-09pythia8: add a cxxstd variant (#44077)Juan Miguel Carceller1-0/+14
* pythia8: add a cxxstd variant * Add multi=False, fix regexp --------- Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-05-09kokkos-nvcc-wrapper: add missing versions (#44089)Richard Berger1-0/+4
2024-05-09mmg: Build & install shared libraries, add 5.7.2 & 5.7.3(#43749)Julien Cortial1-0/+3
2024-05-09Universal Ctags: Add version 6.1.20240505.0 (#44058)RĂ©mi Lacroix1-0/+3
2024-05-09package: libsodium update URL to GitHub (#44090)Vanessasaurus1-10/+6
Problem: the libsodium download endpoints are not reliable, they fail multiple times a day for several of our automated pipelines. Solution: use the GitHub releases and branches. Signed-off-by: vsoch <vsoch@users.noreply.github.com>
2024-05-09Kokkos: adding new release 4.3.01 (#44086)Luc Berger2-0/+3
2024-05-09Octopus 14.1 : Add new version hash (#44083)Ashwin Kumar Karnad1-0/+6
* octopus: add hash for new version * octopus: add --enable-silent-deprecation flag when @14.1:
2024-05-09amr-wind: add missing variants (#44078)Jon Rood1-16/+33
* amr-wind: add missing variants * Fix copy and paste. * waves2amr is only available on amr-wind@2.0 * Style. * Use satisfies.
2024-05-08Orca (standalone) 5.0.4 (#44011)alvaro-sch1-1/+2
* orca: added latest version 5.0.4 * Fixed openmpi versions
2024-05-08mpich: Add license (#43821)Ken Raffenetti1-1/+1
2024-05-08hipsparselt: new package (#44080)Sreenivasa Murthy Kolam2-0/+169
* Initial commit for adding hipsparselt recipe * correct the style errors * remove master version
2024-05-08gcc: use -idirafter for libc headers (#44081)Harmen Stoppels1-1/+1
GCC C++ headers like cstdlib use `#include_next <stdlib.h>` to wrap libc headers. We're using `-isystem` for libc, which puts those headers too early in the search path. `-idirafter` fixes this so `include_next` works.
2024-05-08JAX: add v0.4.27, NCCL variant (#44071)Adam J. Stewart2-113/+131
2024-05-08add flag to turn off building tests and examples (#44075)Jake Koester1-0/+6
2024-05-08py-jsonargparse: add v4.28.0 (#44074)Adam J. Stewart1-0/+1
2024-05-08hypre: add cublas and rocblas variants (#44038)Jon Rood1-1/+12
* Add cublas and roblas variants to hypre. * Fix mistakes. * Remove newline. * Address suggestions.
2024-05-08Bump up the version for ROCm-6.1.0 (#43843)renjithravindrankannath58-66/+1054
* Bump up the version for ROCm-6.1.0 * Style check error correction and patch files * Update for rocm-openmp-extras 6.1 * updating rocm-openmp-extras and math libraries with 6.1 * Style check error correcion * updating hipcub, hipfort & miopen-hip for 6.1 * Rocm-openmp-extras and some mathlib updates * iAudit error correction and rocmlir update * Updating dependency on suite-sparse and adding path * Style check error corection * hip-tensor 6.1.0 update * rdc 6.1 needs grpc 1.59.1 * rvs 6.1 updates and patch
2024-05-08darshan-runtime,darshan-util,py-darshan: add darshan-3.4.5 packages (#43989)shanedsnyder3-3/+10
* add darshan-3.4.5 packages, update URLs * py-setuptools version switches for py-darshan * more py-darshan test dependencies * try a conditional importlib_resources dependency
2024-05-08iq-tree: add new version delete duplicate package (#44043)snehring4-45/+5
* iq-tree: add new version delete duplicate package * Replace iqtree2 dependency orthofinder: replace iqtree2 with iq-tree@2 py-phylophlan: replace iqtree2 with iq-tree@2
2024-05-08cernlib: add 2023.08.14.0-free (#40211)andriish1-4/+13
* Update CERNLIB Update CERNLIB * Update package.py * Update package.py * [@spackbot] updating style on behalf of andriish * cernlib: merge crypto->crypt patches * cernlib: depends_on xbae when `@2023:` * cernlib: patch for Xbae and Xm link order (DSO) * [@spackbot] updating style on behalf of andriish --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-08unmaintained pkg bump: 2024-05-05 (#44021)Alec Scott92-73/+166
* unmaintained pkgs: bump versions * Changes following review feedback * glm: update cmake dependency --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-08gcc: add v14.1.0 (#44053)Massimiliano Culpo1-0/+2