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2021-07-13flecsph package: use cxxstd=17 and external cinch (#24856)Mauricio Ferrato1-2/+2
2021-07-13py-cryptography: add 3.4.7 (#24866)Manuela Kuhn1-7/+14
2021-07-13MAGMA package: fix smoke test method (#24848)G-Ragghianti1-17/+16
The Makefile for the MAGMA smoke tests uses pkg-config to find the MAGMA compile flags, but the test() routine in the spack package was not configured to provide the location of the pkg-config file. This modification sets PKG_CONFIG_PATH correctly to allow the smoketests to successfully compile. It also removes the *_dir variables which were unused by the magma examples/Makefile.
2021-07-13Octave: add version 6.3.0 (#24851)Martin Köhler1-0/+1
2021-07-13py-jupyterlab, py-jupyter-server: fix version range (#24864)Michael Kuhn2-2/+2
Using the original concretizer, trying to concretize py-jupyterlab fails with ``` ==> Error: Invalid Version range: 6.1.0:6.1 ``` because py-tornado does not have a 6.1.0 version but only a 6.1 one.
2021-07-13libtirpc: Fix for #24806 (remove -pipe flag when using %nvhpc) (#24807)Tom Payerle2-0/+27
Makefiles for libtirpc have hardcoded the -pipe flag to the compiler nvhpc compilers do not recognize that flag. This PR provides a patch to remove the -pipe flag from the Makefile. Patch should work with libtirpc@1.2.6 and @1.1.4
2021-07-13HOHQMesh: add version v1.0.1 (#24823)Michael Schlottke-Lakemper1-0/+1
2021-07-13openmpi: add direct cuda dependency (#24859)Frank Willmore1-0/+2
makes cuda a direct dependency, so it still shows up when using external hwloc+cuda
2021-07-13py-jupyterlab: fix startup and add 3.0.16 (#24780)Manuela Kuhn1-4/+27
jupyterlab was looking for its application directory inside the python prefix instead its own one. This was fixed by setting the according environment variable.
2021-07-13scotch: new versions, 6.1.0 and 6.1.1 (#24855)Robert Mijakovic1-0/+2
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-07-13py-torch: CUDA 9.2+ required for 1.6+ (#24808)Adam J. Stewart1-0/+1
2021-07-13blast-plus: add version 2.12.0 (#24828)Jianwen1-1/+4
2021-07-13hdf5: new version 1.12.1 (#24841)Seth R. Johnson1-0/+1
2021-07-13ACTS package: add version 9.02.0 (#24844)Hadrien G1-0/+1
2021-07-13Add new Cython version (#24853)iarspider1-0/+1
2021-07-13graphviz: add python dependency to fix installation (#24852)Manuela Kuhn1-0/+2
The bootstrap script in the autoreconf procedure calls the gen_version.py script which requires python 3.6 to process f-strings.
2021-07-13py-awkward: add version 1.4.0 (#24838)Valentin Volkl1-1/+3
2021-07-13whizard: add version 3.0.1 (#24836)Valentin Volkl1-1/+2
2021-07-13gaudi: add version 36.0 (#24840)Valentin Volkl1-0/+1
2021-07-13cppunit: disable doxygen (#24850)Valentin Volkl1-0/+4
2021-07-12c-blosc2: New version 2.0.2 (#24843)Erik Schnetter1-0/+1
2021-07-12py-uproot: add version 4.0.11 (#24835)Valentin Volkl1-2/+6
2021-07-12py-hepunits: add version 2.1.1 (#24837)Valentin Volkl1-0/+1
2021-07-12Update caffe package for cuda9 (#24831)jkelling1-2/+8
Add base CudaPackage, cuda_arch
2021-07-12hepmc3: add version 3.2.4 (#24839)Valentin Volkl1-2/+2
* hepmc3: add version 3.2.4 * hepmc3: clean up legacy arguments from hepmc2 and fix tests
2021-07-12folly: added latest version and switched to CMakePackage (#23938)Ryan O'Malley1-18/+20
* added latest version and switched to CMakePackage * Added optional dependencies and cxxstd variant * Added cxxstd variant and optional dependencies * Added lib. that Boost doesn't install by default * BUG: Removed previous broken versions of Folly * BUG: refactored comments * BUG: Fixed styling errors
2021-07-12Update pathos (#24636)Sebastian Schmitt1-2/+8
* Update pathos * Add build and run
2021-07-12Update multiprocess (#24634)Sebastian Schmitt1-1/+4
* Update multiprocess * Add build and run
2021-07-12py-sphobjinv: add new package (#24790)Adam J. Stewart1-0/+22
2021-07-12lorene, pgplot: new packages (#24549)Erik Schnetter4-0/+255
2021-07-11Expat: add version 2.4.0, 2.4.1; fix CVE-2013-0340 (#24669)Christoph Conrads1-3/+7
* Expat: add version 2.4.0, 2.4.1; fix CVE-2013-0340 fixes #24628 * E4S pipeline: update pinned Expat version
2021-07-10votca-tools: fix build with newer gcc/glibc (#24815)Christoph Junghans1-0/+2
2021-07-09openPMD-api: rename develop (#24810)Axel Huebl2-2/+2
* openPMD-api: rename develop Rename to match known Spack version comparison schemes: ``` develop>main>master>head>trunk>9999>0>z>a ``` Currently, the hdf5 patch that is pre-0.14.0 is also applied to `dev`, which naturally fails (already applied). * fix dev in warpx
2021-07-09toml11: New package (#24620)Asher Mancinelli1-0/+28
2021-07-09py-markupsafe: add 2.0.1 (#24766)Manuela Kuhn1-1/+3
* py-markupsafe: add 2.0.1 * Update var/spack/repos/builtin/packages/py-markupsafe/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09hypre: Add new versions (#24625)QuellynSnead1-0/+2
* hypre: Add releases 2.21.0 and 2.22.0
2021-07-09py-fuzzywuzzy: add new package (#24789)Adam J. Stewart1-0/+21
2021-07-09libnids: add new package (#22153)darmac1-0/+23
2021-07-09scotch: default to not installing vendored metis/parmetis (#24785)Seth R. Johnson1-5/+16
2021-07-09acts: add v9.01.00 (#24570)Hadrien G1-0/+1
2021-07-09c-blosc2: adds v2.0.1 (#24581)Robert Mijakovic1-3/+3
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu> Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-07-09heffte: add v2.1.0 (#24599)Miroslav Stoyanov1-6/+28
2021-07-09util-macros: new versions, 1.19.2/3 (#24612)Robert Mijakovic1-0/+4
Co-authored-by: Robert Mijakovic <robert.mijakovic@lxp.lu>
2021-07-09global: add v6.6.6 (#24642)Gabriel Rockefeller1-0/+3
2021-07-09py-bids-validator: add new package (#24677)Manuela Kuhn1-0/+17
2021-07-09py-sqlalchemy: add 1.4.20 (#24676)Manuela Kuhn1-4/+16
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09pthreadpool: enable shared libraries (#24657)Dylan Simon1-0/+1
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-09spla: add v1.5.1 (#24661)Simon Frasch1-0/+1
2021-07-09spfft: add v1.0.4 (#24662)Simon Frasch1-0/+1
2021-07-09trilinos: add a neww maintainer (#24670)Paul Kuberry1-1/+1