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perl-role-tiny, perl-moo, perl-sub-quote (#33274)
* added mlst and deps
* added install() to any2fasta
* added script dependencies, builds OK
* fixed style
* Update var/spack/repos/builtin/packages/any2fasta/package.py
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* udunits: Update download URL
* udunits: Deprecate older versions
Unidata now only provides the latest version of each X.Y branch. Older 2.2 versions have been deprecated accordingly but are still available in the build cache.
Co-authored-by: RemiLacroix-IDRIS <RemiLacroix-IDRIS@users.noreply.github.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* Update wgrib2 from JCSDA/NOAA-EMC fork
* var/spack/repos/builtin/packages/wgrib2/package.py: fix typo in comment, add conflict for variants netcdf3, netcdf4
* wget hdf5/netcdf4 internal dependencies for wgrib2
* Black-format var/spack/repos/builtin/packages/wgrib2/package.py
* More format changes in var/spack/repos/builtin/packages/wgrib2/package.py
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Gmsh started supporting the "scoping" option of CGNS in version 4.8.0.
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(#33427)
* Update py-sphinxcontrib-mermaid
* Add py-myst-parser
* Fix py-mdit-py-plugins and py-myst-parser dependencies
* Add py-exhale package
* Update var/spack/repos/builtin/packages/py-mdit-py-plugins/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-myst-parser/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-myst-parser/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-myst-parser/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update py-exhale and py-myst-parser dependencies
* Add @svenevs as py-exhale maintainer
* Update var/spack/repos/builtin/packages/py-mdit-py-plugins/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Scan the text files for relocatable prefixes *before* creating a tarball,
to reduce the amount of work to be done during install from binary
cache.
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
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Co-authored-by: rem1776 <Ryan.Mulhall@noaa.gov>
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* py-drep: new package
* fixed file extension
* added darwin conflict
* py-checkm-genome and py-pysam: bumped version and updated deps (#10)
added checkm and pysam deps
* added dep documentation and fixed style
* changed checkm and pysam back to dev version for upstreaming
* added url and perl run dep
* fixed style
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Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
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* acts: new versions
In the 20.x release line, these are the changes, https://github.com/acts-project/acts/compare/v20.0.0...v20.2.0
- `option(ACTS_SETUP_ACTSVG "Build ActSVG display plugin" OFF)` introduced in v20.1.0
- `option(ACTS_USE_SYSTEM_ACTSVG "Use the ActSVG system library" OFF)` introduced in v20.1.0
- `option(ACTS_BUILD_PLUGIN_ACTSVG "Build SVG display plugin" OFF)` introduced in v20.1.0
- `option(ACTS_USE_EXAMPLES_TBB "Use Threading Building Blocks library in examples" ON)` introduced in v20.1.0
- `option(ACTS_EXATRKX_ENABLE_ONNX "Build the Onnx backend for the exatrkx plugin" OFF)` introduced in v20.2.0
- `option(ACTS_EXATRKX_ENABLE_TORCH "Build the torchscript backend for the exatrkx plugin" ON)` introduced in v20.2.0
In the 19.x release line, these are the changes: https://github.com/acts-project/acts/compare/v19.7.0...v19.9.0
- `option(ACTS_USE_EXAMPLES_TBB "Use Threading Building Blocks library in examples" ON)` introduced in v19.8.0
The new build options have not been implemented in this commit but will be implemented next.
* acts: new variant svg
* actsvg: new package
* actsvg: style fixes
* acts: new versions 20.3.0 and 19.10.0
* astsvg: depends_on boost googletest
* actsvg: new version 0.4.26 (and style fix)
Includes fix to build issue when +examples, https://github.com/acts-project/actsvg/pull/23
* acts: new variant tbb when +examples @19.8:19 @20.1:
* acts: set ACTS_USE_EXAMPLES_TBB
* acts: no need for ACTS_SETUP_ACTSVG
* acts: move tbb variant to examples block
* acts: ACTS_USE_SYSTEM_ACTSDD4HEP removed in 20.3
* acts: use new ACTS_USE_SYSTEM_LIBS
* acts-dd4hep: new version 1.0.1, maintainer handle fixed
* acts: simplify variant tbb condition
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* arborx: add new release 1.3
* [@spackbot] updating style on behalf of aprokop
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* Update maintainers for NOAA/EMC-maintained libraries
* Fix line lengths
* Fix line length for gptl
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* Fix openfast package file.
* Fix openfast package file.
* Fix typo.
* [@spackbot] updating style on behalf of jrood-nrel
Co-authored-by: jrood-nrel <jrood-nrel@users.noreply.github.com>
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* added py-instrain dependencies
* fixed style
* removed coverm dep until I have a working coverm package
* added dep documentation
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* updated python version requirements
* updated sha256
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* py-checkm-genome and py-pysam: bumped version and updated deps
* updated setuptools dep type
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* axom@0.7.0: require cmake@3.21:
* Update var/spack/repos/builtin/packages/axom/package.py
Co-authored-by: Chris White <white238@llnl.gov>
Co-authored-by: Chris White <white238@llnl.gov>
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2021.7.0 fixes build on linux-ubuntu20.04-skylake / oneapi@2022.2.0
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* fixed version numbers to python 2 and old biopython
* changed shortbred pacakge to pypi, removed python 2 version
* added package description
* re-added shortbred package with depreciated flag
* fixed style and removed unnecessary python dep (it can't build with python 2 anyway)
* removed whitespace and readded the python2.7.9+ dep
* fixed style
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* Add Boost 1.80.0
* Add conflict for Boost 1.80.0 and dealii
* Add conflict for Boost 1.80 and %oneapi
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* hiop: add v0.7.0
* Update var/spack/repos/builtin/packages/hiop/package.py
Co-authored-by: Cameron Rutherford <cameron.rutherford@me.com>
Co-authored-by: Cameron Rutherford <cameron.rutherford@me.com>
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* kokkos: add version 3.7.00
* kokkos-kernels: add versions 3.6.01 and 3.7.00
* add correct kokkos dependence
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- add conflcit with gcc < 7
- fails with MacOS sed - so add in (gnu) sed as build dependency
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* Update OpenFAST package file.
* Add comment.
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* ophidia-primitives: new package at v1.7
* ophidia-primitives: Add mantainers
* ophidia-primitives: Fix style
Co-authored-by: SoniaScard <SoniaScard@users.noreply.github.com>
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* Update TIOGA package.
* Add comment.
* Remove cuda variant and MPI_ROOT.
* Style.
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