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* Properly ignore flake8 F811 redefinition errors
* Add unit tests for flake8 command
* Allow spack flake8 to work on systems with older git
* Skip flake8 unit tests for Python 2.6 and 3.3
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* legion: add mpi inoperability
* legion: make +mpi the default
* legion: add shared variant
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* Added magma package
* Incorporated Serban's change
* globalarrays: add global arrays package to Spack.
* globalarray: remove extreaneous comment from package file
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* Added a package for the MDAnalysis toolkit.
* Added the hash for the 1.0 release of caffe and put in a conflict
statemet indicating that protobuf requires a c++11 compiler.
* Changed minimum version number.
* Tweaked the minimum version number.
* Fixed flake8 error.
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* new Intel libs do not require license to install
* updated Intel library package URLs
* disable license_required for new Intel libraries
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* grib-api: add version 1.21.0
* libemos: add version 4.4.7 and allow choice of eccodes or grib-api
* magics: add version 2.32.0
* libemos: add description for eccodes variant
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* eccodes: new package for encoding and decoding meteorological data
* eccodes: remove line breaks from package docstring
* eccodes: simplify names of variants
* eccodes: give a description for each variant
* eccodes: use succinct code for cmake_args
* eccodes: found extra dependency for python variant
* eccodes: add URL for a list of available releases
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* Hack to fix python dependency ranges
* Flake8
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* intel-mpi: add new package
* fix hashes
* fix typo
* flake8
* add install
* blank line
* error
* add bin64
* fix MPI wrappers in intel-parallel-studio
* add missing I_MPI_FC
* use shorter hashes
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- py-setuptools is required by py-yt for importing yt in jupyter notebooks.
- add two dependencies needed for python 2.7
- add the py-subprocess32 package
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- add setuptools dependencies to packages that need it.
- remove setuptools from packages that do not need it.
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- Spack doesn't need eggs -- it manages its own directories
- Simplify install layout and reduce sys.path searches by installing all
packages flat (eggs are deprecated for wheels, and this is also what
wheels do).
- We now supply the --single-version-externally-managed argument to
`setup.py install` for setuptools packages and setuptools.
- modify packages to only use setuptools args if setuptools is an
immediate dependency
- Remove setuptools from packages that do not need it.
- Some packages use setuptools *only* when certain args (likeb
'develop' or 'bdist') are supplied to setup.py, and they specifically
do not use setuptools for installation.
- Spack never calls setup.py this way, so just removing the setuptools
dependency works for these packages.
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* Convert LLVM to CMakePackage, update cmake dependency version
* Remove unused import
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* Checksum code wasn't opening binary files as binary.
- Fixes Python 3 issue where files are opened as unicode text by default,
and decoding fails for binary blobs.
* Simplify fetch test parametrization.
* - add tests for URL fetching and checksumming.
- fix coverage on interface functions in FetchStrategy superclass
- add some extra crypto tests.
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* Fix HPL build, convert to MakefilePackage
* Flake8 fix
* Fix: spec -> self.spec
* Properly query for system libraries
* Update Intel-MKL as well
* Recurse in system libs, fix MKL path, fixes lapack_libs
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* Fix for llvm 4.0.0 on centos
This addresses https://github.com/LLNL/spack/issues/3791
* Only enable this option if on linux
* Change condition to satisfy standard
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* Added a package for the MDAnalysis toolkit.
* Added has for Keras version 2.0.3
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Since scorep does not support all use cases yet, vampirtrace is still
useful in some circumstances.
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* Revert "Override partial installs by default (#3530)"
This reverts commit a65c37f15dff4b4d60784fd4fcc55874ce9d6d11.
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* Package install remove prior unfinished installs
Depending on how spack is terminated in the middle of building a
package it may leave a partially installed package in the install
prefix. Originally Spack treated the package as being installed if
the prefix was present, in which case the user would have to
manually remove the installation prefix before restarting an
install. This commit adds a more thorough check to ensure that a
package is actually installed. If the installation prefix is present
but Spack determines that the install did not complete, it removes
the installation prefix and starts a new install; if the user has
enabled --keep-prefix, then Spack reverts to its old behavior.
* Added test for partial install handling
* Added test for restoring DB
* Style fixes
* Restoring 2.6 compatibility
* Relocated repair logic to separate function
* If --keep-prefix is set, package installs will continue an install from an existing prefix if one is present
* check metadata consistency when continuing partial install
* Added --force option to make spack reinstall a package (and all dependencies) from scratch
* Updated bash completion; removed '-f' shorthand for '--force' for install command
* dont use multiple write modes for completion file
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* Add tests to mercurial package
* Add support for --insecure with mercurial fetching
* Install man pages and tab-completion scripts
* Add tests and latest version for all deps
* Flake8 fix
* Use certifi module to find CA certificate
* Flake8 fix
* Unset PYTHONPATH when running hg
* svn_fetch should use to svn-test, not hg-test
* Drop Python 3 support in Mercurial
Python 3 support is a work in progress and isn't currently
recommended:
https://www.mercurial-scm.org/wiki/SupportedPythonVersions
* Test both secure and insecure hg fetching
* Test both secure and insecure git and svn fetching
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* Initial add of flac
* Initial add of id3lib
* Initial add of the opus codec
* Initial add of sox audio processing tools
* Cleanup spec files to be inline with current standard
* Fix pep8 compliance
* Remove un-needed configuration
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* ncl: add depends_on statements for bison, flex and libiconv
* ncl: depends on flex for building and linking
* ncl: links with -ll, so requires flex with variant '+lex'
* ncl: depends on szip; external hdf5 may not provide it
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* espresso: fix missing dependency on elpa, add 6.1.0
* override default libs of elpa to get shared always
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* Disable parallel builds
The install step creates a bunch of links to the vim binary, e.g.
`view`. When run with -j greater than 1 there are silent failures.
Running w/out parallelism seems to fix it.
* Only constrain the install phase to be -j 1
Thanks @adamjstewart!
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* Adding new python package: py-simplejson
* Adding setuptools dependency
* Fixing typo
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see https://github.com/LLNL/spack/pull/3852#pullrequestreview-32996651
for details
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* ocotpus and arpack-ng: fix arpack bug and add libs to arpack-ng
also rename the variant to be consistent with other packages
* fix a bug
* flake8
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