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2016-09-06ITS XML Translation Tool (#1728)Robert D. French1-0/+44
2016-09-06fontconfig: add --disable-docs to configure (#1729)Jeffrey Salmond1-1/+3
2016-09-06For OpenMPI v 2+, add a configure option to provide C++ bindings. (#1730)Kelly Thompson2-1/+5
+ Starting with version 2.0, OpenMPI no longer provides C++ bindings by default (libmpi_cxx.so). Add a configure option to instruct the build to also build and install libmpi_cxx.so. + This MPI feature is needed by at least one spack package (moab).
2016-09-06plumed : avoid linking with libgslcblasalalazo1-0/+8
2016-09-03added package : pexsi (#1550)Massimiliano Culpo7-9/+221
* pexsi : added package * cp2k : added pexsi (works for gcc+openmpi with and without plumed)
2016-09-02Merge pull request #1704 from eschnett/eschnett/libiconf-getsbecker332-0/+17
Make libiconv work with C11
2016-09-02Merge pull request #1708 from robertdfrench/globus-toolkitbecker331-0/+40
Globus Toolkit
2016-09-02Merge pull request #1715 from alfredo-gimenez/bugfix/vimbecker331-3/+3
Fix vim package.
2016-09-02Add sbt (scala build tool) packageAlfredo Gimenez1-0/+18
2016-09-02Fix vim packageAlfredo Gimenez1-3/+3
2016-09-02Update OpenMPI description (#1705)Erik Schnetter1-6/+8
2016-09-02Fixes for the ImageMagick package. (#1709)Jeffrey Salmond2-2/+42
* add pango dependency * add new package ghostscript-fonts & add to ImageMagick as dependency also tell ImageMagick's configure where the font dir is! * refactor to fix flake8 * add homepage to ghostscript-fonts * use install_tree * remove unneeded import
2016-09-02Declare qthreads dependency on automake (#1711)Erik Schnetter1-0/+1
2016-09-02Globus ToolkitRobert.French1-0/+40
2016-09-02Add two famous old versions of autoconfErik Schnetter1-0/+2
These old versions are often used because their immediate successors are incompatible in some way.
2016-09-02Make libiconv work with C11Erik Schnetter2-0/+17
C11 does not provide gets() any more, so we cannot reference it
2016-09-01Merge pull request #1658 from LLNL/features/git-lfsTodd Gamblin1-0/+42
Add git-lfs package.
2016-08-31Switch lzo download from https to httpErik Schnetter1-1/+1
lzo's download server does not present a valid certificate, so that downloads via https are failing. Spack's MD5 checksum still ensure a safe download. Closes #1675.
2016-08-30Undo changes to trailing triple quotes in docstringAdam J. Stewart28-28/+56
2016-08-30Resolve new documentation issues that have cropped upAdam J. Stewart3-14/+11
2016-08-30Remove py-mercurial, going with mercurial package insteadAdam J. Stewart1-44/+0
2016-08-30Fix package docstrings, #1612Adam J. Stewart31-128/+83
2016-08-30Add mercurial package, used as test dependencyAdam J. Stewart2-1/+45
2016-08-30Merge pull request #1412 from adamjstewart/features/cmakeTodd Gamblin12-40/+264
Overhaul of CMake package and compression libraries
2016-08-30Merge pull request #1668 from ax3l/topic-pngwriterTodd Gamblin1-0/+55
PNGwriter: Add Spack Package
2016-08-30HDF5 Dependency: Rewrite to UnionAxel Huebl1-2/+2
@adamjstewart ``` think you'll find that if you try running something like: spack spec libsplash ^hdf5@1.8.15 It will complain that libsplash does not depend on hdf5. This is a bug in Spack's dependency resolution. A workaround for this is to tell it to always depend on hdf5. ``` @davydden ``` to expand on @adamjstewart comment, spack will make a union of dependencies, i.e. hdf5@1.8.6: + hdf5+mpi = hdf5:1.8.6:+mpi, that's why it works. ``` thank you for the hint!
2016-08-30PNGwriter: Add Spack PackageAxel Huebl1-0/+55
Adds a package for [PNGwriter](https://github.com/pngwriter/pngwriter/), a simple high-level C++ png API used in scientific projects. ``` PNGwriter is a very easy to use open source graphics library that uses PNG as its output format. The interface has been designed to be as simple and intuitive as possible. It supports plotting and reading pixels in the RGB (red, green, blue), HSV (hue, saturation, value/brightness) and CMYK (cyan, magenta, yellow, black) colour spaces, basic shapes, scaling, bilinear interpolation, full TrueType antialiased and rotated text support, bezier curves, opening existing PNG images and more. ``` PNGwriter is a dependency for [PIConGPU](http://picongpu.hzdr.de), an open-source, many-core, fully-relativistic particle-in-cell code and further software developed at [Helmholz-Zentrum Dresden - Rossendorf](https://www.hzdr.de).
2016-08-30libSplash: Add Spack PackageAxel Huebl1-0/+59
Adds a package for [libSplash](https://github.com/ComputationalRadiationPhysics/libSplash), a high-level library around serial and parallel HDF5 for regular grids and particle data sets. ``` libSplash aims at developing a HDF5-based I/O library for HPC simulations. It is created as an easy-to-use frontend for the standard HDF5 library with support for MPI processes in a cluster environment. While the standard HDF5 library provides detailed low-level control, libSplash simplifies tasks commonly found in large-scale HPC simulations, such as iter- ative computations and MPI distributed processes. ``` libSplash is a dependency for [PIConGPU](http://picongpu.hzdr.de), an open-source, many-core, fully-relativistic particle-in-cell code and further software developed at [Helmholz-Zentrum Dresden - Rossendorf](https://www.hzdr.de). libSplash builds in two versions, one without MPI writing domain-decomposed posix-style HDF5 files per process and one (default) with MPI and MPI-I/O ("parallel HDF5") support aggregating into a single file per MPI communicator. libSplash is used in conjunction with [openPMD](http://openPMD.org), see also [github.com/openPMD/](https://github.com/openPMD/).
2016-08-29Merge pull request #1652 from ax3l/topic-updateAdios110Todd Gamblin1-16/+103
Update ADIOS Package
2016-08-29libpciaccess: Changed libtool to a build dependency. (#1602)Elizabeth Fischer1-1/+1
2016-08-30Remove Space, Enable ParallelAxel Huebl1-4/+1
- remove space before comma - enable parallel build again (seems to work)
2016-08-30ADIOS: Use NetCDF Prefix from spec'sAxel Huebl1-2/+1
2016-08-29added qt-creator (#1659)Gregory Lee1-0/+46
2016-08-30Defaults: MPI=True, Fortran=FalseAxel Huebl1-2/+2
- ADIOS is mainly a parallel I/O library - a Fortran compiler is non-standard in a minimal install
2016-08-29RM Outdated Comments, Versions & CodeAxel Huebl1-10/+1
2016-08-29Always External MXML; type='build'Axel Huebl1-8/+7
- always use `mxml` as an external dependency in spack - declare `build`-only dependencies correctly
2016-08-29ADIOS: disable parallel makeAxel Huebl1-0/+3
2016-08-29New URL scheme for newer (and older) PDTs (#1651)Robert D. French1-7/+7
2016-08-29ADIOS: Run Autotools FirstAxel Huebl1-0/+8
2016-08-29Ole' GNU nano; Actually ran flake8 (#1649)Robert D. French1-0/+40
2016-08-29Merge pull request #1563 from adamjstewart/features/sphinxTodd Gamblin13-41/+279
Add all Sphinx dependencies
2016-08-29Update ADIOS PackageAxel Huebl1-14/+104
This PR updates the ADIOS package. **Changes:** - add latest stable release `1.10.0` - add previous versions (hashes) - add default license header - add build options (shamelessly taken from HDF5 package) - add validation for excisting FC (as in HDF5) and make optional - handle mxml dependency correctly (not required in 1.10.0+) - add `CFLAGS=-fPIC` to build shared (python) libs in ADIOS' lib - remove `-DMPICH_IGNORE_CXX_SEEK` since it is normally not required - remove `MPICC/CXX?FC` since `--with-mpi` just performs well - add transforms: - `zlib`: useful (optional) default - `szip`: optional (compile often broken) - add transports that are not as performant as the `.bp` format: - `hdf5`: non-default - `netcdf`: non-default, close #1610
2016-08-29Merge pull request #1619 from davydden/pkg/nwchem_macos_fixTodd Gamblin1-0/+5
nwchem: use basename for CC and FC
2016-08-29nwchem: use basename for CC and FCDenis Davydov1-0/+5
2016-08-29Merge pull request #1650 from davydden/pkg/ape_octopus_commentsTodd Gamblin2-4/+14
ape octopus: in-code comments
2016-08-29octopus: in-code comments to explain compiler flagsDenis Davydov1-4/+7
2016-08-29ape: in-code comments to explain compiler flagsDenis Davydov1-0/+7
2016-08-28Merge pull request #1041 from adamjstewart/features/matplotlibTodd Gamblin11-175/+233
Matplotlib Python package overhaul
2016-08-28add versions 2.2rc2 and 2.1 to the mvapich2 package (#1630)Abhinav Bhatele1-6/+8
2016-08-28Hot-fix for qthreads (#1632)Erik Schnetter1-4/+19
The download tarball for qthreads vanished. Install it from a git branch instead as temporary work-around.
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