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2024-06-03Apply patch to allow vtk to compile with %gcc 13 and 14. (#44332)Chris Marsh1-0/+8
* Apply patch from upstream to allow vtk compilation with %gcc 12 and 14. * Fixes #44331 * fix soec usage * fix compiler version range * Finalize version range, switch to .diff file --------- Co-authored-by: Chrismarsh <Chrismarsh@users.noreply.github.com>
2024-06-02upcxx: update to latest gasnet and fix some bitrot (#44488)Dan Bonachea2-8/+42
* Now need to explicitly depend on libfabric for Cray EX * Ensure build uses the selected CUDA and ROCm versions * Correct spelling on `configure --with-ldflags` * Patch a defect regarding `configure --with-ldflags` * Default to Spack's copy of GASNet-EX, which is newer than embedded
2024-06-01gasnet: add v2024.5.0 (#44478)Dan Bonachea1-7/+17
* Add GASNet v 2024.5.0 * cosmetic fix to info output * Add a missing dependency * Ensure GASNet detects the provided ROCm/CUDA dependency * [@spackbot] updating style on behalf of bonachea --------- Co-authored-by: bonachea <bonachea@users.noreply.github.com>
2024-06-01py-fortls: add v3.1.0 (#44477)Rocco Meli1-1/+4
* Spglib: add version 2.4.0 * DLA-Future: fix +test option * update * [@spackbot] updating style on behalf of RMeli * Apply suggestions from code review Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> --------- Co-authored-by: RMeli <RMeli@users.noreply.github.com> Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-06-01gmsh: add v4.11.1, master (#41320)Filippo Spiga1-0/+3
* Adding gmsh 4.11.1 * Becoming a maintainer --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-06-01py-griddataformats: add v1.0.2 (#44475)Rocco Meli1-2/+5
* update * Apply suggestions from code review Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-06-01apptainer: adding version 1.3.1 (#44104)snehring5-1/+80
e2fsprogs: adding version 1.47.0 and fuse2fs variant fuse-overlayfs: adding version 1.13 squashfuse: adding version 0.5.1 and 0.5.2 e2fsprogs: fixing audit errors apptainer: expanding deps to cover more versions, fix binary_path logic. apptainer: add go version deps, fix e2fsprogs patch sums, rework dep paths fuse-overlayfs: tightening up the libfuse dep Signed-off-by: Shane Nehring <snehring@iastate.edu>
2024-05-31mapl: add 2.46.2, 2.40.5 (#44466)Matt Thompson1-0/+2
2024-05-31pass: new package (#44454)James Taliaferro1-0/+63
* New package: password-store * add bash completion as variant * also patch the cygwin platform snippet * update description and maintainers * make completions implicit and don't overwrite the completions package * remove completion option * formatting * clean up file filter syntax * remove reference to completion variant * remove dependency on bash-completion * clarify comments * bashcompdir is already the default * add optional dependency on xclip * fix formatting
2024-05-31ruby: adding version 3.3.2 (#44447)snehring1-0/+1
Signed-off-by: Shane Nehring <snehring@iastate.edu>
2024-05-31tamaas: adding new versions and python install fix (#44469)Lucas Frérot2-1/+75
* tamaas: install python extension with explicit pip call * tamaas: patching compilation issues with recent compilers * tamaas: added versions 2.7.0 and 2.7.1
2024-05-31add in the latest versions of FMS (#44471)Ryan Mulhall1-0/+8
Co-authored-by: rem1776 <rem1776@github.com>
2024-05-31dla-future: Add 0.5.0 (#44463)Raffaele Solcà1-2/+20
* add dla-future@0.5.0 * [@spackbot] updating style on behalf of rasolca * fix typo * review suggestions --------- Co-authored-by: rasolca <rasolca@users.noreply.github.com>
2024-05-31Updated version (#44461)potter-s1-0/+1
Co-authored-by: Simon Potter <sp39@sanger.ac.uk>
2024-05-31util-macros: ensure url_for_version works for older versions (#44421)Wouter Deconinck1-5/+5
* util-macros: ensure url_for_version only used for older versions * util-macros: use url.substitute_version after xz -> bz2 * util-macros: mv url_for_version down the file
2024-05-31py-junit2html: new package, version '31.0.2' (#44399)Lydéric Debusschère1-0/+23
* py-junit2html: new package, version '31.0.2' * py-junit2html: install from sources instead of from wheel
2024-05-31Bump-up rocm-opencl with 6.1.0 & 6.1.1 and adding hsa library path in ↵renjithravindrankannath2-4/+22
LD_LIBRARY_PATH (#44171) * Adding hsa library path in LD_LIBRARY_PATH * Prepending instead of setting LD_LIBRARY_PATH to hsa-rocr-dev/lib * adding rocm-opencl 6.1.0 & 6.1.1 updates
2024-05-31Updates meep to latest release 1.29.0 (#44468)Matt Schramm1-0/+1
2024-05-31Adding HPX v1.10.0 to package (#44470)Hartmut Kaiser1-0/+1
2024-05-31Changes for NVIDIA HPC SDK 24.5 (#44354)jmuddnv1-0/+10
2024-05-31fujitsu-mpi: point MPI compiler wrappers to Spack compiler wrappers (#44457)jdomke1-0/+6
Using OMPI_ environment variables, like openmpi does.
2024-05-31py-numexpr: add v2.8.8, v2.9.0 (#44451)Wouter Deconinck1-0/+3
2024-05-31petsc4py: fix typo with version (#44452)Satish Balay1-1/+1
2024-05-31protobuf: fix 3.4:3.21 patch checksum (#44443)Tom Bradford1-2/+2
2024-05-31dla-future-fortran: fix +test option (#44458)Rocco Meli1-1/+5
* Spglib: add version 2.4.0 * DLA-Future: fix +test option
2024-05-30paraview: update cuda_arch management (#44243)Alberto Invernizzi1-35/+53
* refactor logic to switch to cmake for cuda management
2024-05-30corrected the vmd 1.9.3 tarball checksum (#44433)Tom Bradford1-1/+1
2024-05-30unmaintained pkgs: bump versions 2024-05-20 (#44274)Alec Scott72-98/+166
* unmaintained pkgs: bump versions 2024-05-20 * seqkit: revert changes * msgpack-c: add dependency on boost * msgpack-c: revert to test neovim * revert: parallel, openblas, and re2c due to conflicts * gmsh: revert changing version * trilinos: limit version of suite-sparse to fix build * gtkorvo-atl: deprecate develop before remove * msgpack-c: deprecate v1.4.1 * msgpack-c: fix style --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-30Package/gettext: Old version issues (#44440)Teague Sterling1-6/+9
gcc@:5 hits https://savannah.gnu.org/bugs/index.php?65811 in gettext@0.22: also fix patch of configure script Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-05-30Bump-up the version for RoCm-6.1.1 release (#44178)Sreenivasa Murthy Kolam55-103/+628
* initial commit for RoCm-6.1.1 release * fix style issues * update the version for rocmlir and rocm-cmake * restrict the patch for 6.0.0 release * fix build failure for hipsolver-6.1.1 release * update the hipblaslt for rocm-6.1.1 release * add the patch for hipsparselt for 6.1.1 rel
2024-05-30petsc, py-petsc4py: add v3.21.2 (#44439)Satish Balay2-0/+2
2024-05-30remove platform=cray (#43796)Massimiliano Culpo81-348/+80
Remove support for `cray` as a separate platform. Any platform previously detected as `cray` is now detected as `linux`. Users who still need platform=cray have to stick to Spack 0.22
2024-05-30rocm-validation-suite: custom patch update for lib and lib64 yaml library ↵renjithravindrankannath2-20/+32
path (#44287)
2024-05-30conmon: add v2.1.12 (#44389)Wouter Deconinck1-0/+1
2024-05-29nim: add v2.0.4 (#44375)Diego Alvarez S1-3/+5
* Add nim 2.0.4 * Use install instead of copy --------- Co-authored-by: dialvarezs <dialvarezs@users.noreply.github.com>
2024-05-29Patch to add hsa prefix/include path (#44334)renjithravindrankannath3-15/+17
* Patch to add hsa prefix/include path:wq * Style check error fix * The patch need to be applied to 2024.01.stable. ROCm 6.0 requires hpctoolkit 2024.01.1 or later * Fixing style chec error
2024-05-29Update py-pyspark and py-py4j (#44263)Teague Sterling10-22/+151
* Adding a py4j variant that requires Java via spack to avoid situations where a system doesn't have Java and py4j expects it * Adding new versions of py-pyspark * Adding a new variant to require java (via py4j) and clean up dependency handling * Adding myself as a maintainer for py-pyspark and py-py4j * Fix overlooked version bump in py4j * Version bump to meet py-spark expectations * Version bump to add latest compatibile version with pyspark * Matching py-grpcio bump * Adding variants and dependents for pyspark * Adding runtime deps * Changing default java requirement. I'm not sure this is the right call * Changing py4j with java dependency handling * Fix style * Update package.py fix unnecessary f-strinh * Make +java the default for both * Fix nested deps * Revert styles after default change * Added new versions and GCC 14 compatbility conflicts * Added new versions and compatibility conflicts for gcc 14 * Added new versions paired to arrow (for gcc14 compat) * Update py-protobuf compiler conflict * Update depends to match See https://github.com/grpc/grpc/blob/master/src/python/grpcio_status/setup.py * Updating dependencies and conflicts for py-googleapis-common-protos. Added new version to avoid future issues * Remove upper bound version on py-protobuf and add default_args * Adding new versions and updating dependencies back to versions 1.35.0 * Updating oldest numpy deps * Fixing merge * bit more cleaniness for var/spack/repos/builtin/packages/py-googleapis-common-protos/package.py * Adding latest matching version of py-grpcio and py-grpcio-status * Update package.py https://github.com/spack/spack/pull/44263#discussion_r1612317943 * Update dependencies * Adding additional versions for dependent packages. Deprecated two versions: 1.16 is old, built for python ~3.6, and does not build for 3.8. 1.52.0 was removed from pypi * Revert py-grpcio-tools changes. Will include in separate PR * Adding patches and constraints to get 1.48 to build as it's a dependency that is called out for some other packages * Updating to account for yanked packages for dependencies * Fix style * Update sha256 for py-grpcio v0.16.0 to reflect change --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-05-29py-astropy: add v6.1 and new py-astropy-iers-data dependency (#44318)Tony Weaver3-1/+46
* py-astropy: Add version 6.1 Added build info for version 6.1 in py-astropy. Requires a new additional package, astropy-iers-data which has been included as py-astropy-iers-data to match with spack's general naming conventions. Below is the output of the spack install showing successful build fro version 6.1 and the new py-astropy-iers-data package [+] /usr (external glibc-2.28-oj2wjfl2ao5inhfz4qehw6hlck2hizvp) [+] /opt/apps/spack/gcc-runtime-8.5.0-5k6kvi5 [+] /opt/apps/spack/bzip2-1.0.8-t65bq3t [+] /opt/apps/spack/libmd-1.0.4-zbdiprt [+] /opt/apps/spack/libiconv-1.17-jskazis [+] /opt/apps/spack/util-linux-uuid-2.38.1-w3kgjq3 [+] /opt/apps/spack/libxcrypt-4.4.35-zigqpjo [+] /opt/apps/spack/xz-5.4.6-axoznvt [+] /opt/apps/spack/zlib-ng-2.1.6-ccn5qny [+] /opt/apps/spack/libyaml-0.2.5-fxathvq [+] /opt/apps/spack/ncurses-6.4-xbvwv2w [+] /opt/apps/spack/zstd-1.5.6-nyk6gt6 [+] /opt/apps/spack/pcre2-10.42-fu62kky [+] /opt/apps/spack/libunistring-1.2-whrov3e [+] /opt/apps/spack/nghttp2-1.57.0-u72gxms [+] /opt/apps/spack/openblas-0.3.26-pfyk2vi [+] /opt/apps/spack/berkeley-db-18.1.40-jftva2u [+] /opt/apps/spack/wcslib-7.3-zvcqq7o [+] /opt/apps/spack/libffi-3.4.6-ibucrfe [+] /opt/apps/spack/erfa-2.0.0-4qkta2n [+] /opt/apps/spack/pkgconf-1.9.5-ckjdqjm [+] /opt/apps/spack/libbsd-0.12.1-njt5grs [+] /opt/apps/spack/openssl-3.2.1-4lqdgni [+] /opt/apps/spack/pigz-2.8-rx263bp [+] /opt/apps/spack/readline-8.2-2ys6ede [+] /opt/apps/spack/libidn2-2.3.7-vnie4rz [+] /opt/apps/spack/libedit-3.1-20230828-676jwbd [+] /opt/apps/spack/libxml2-2.10.3-37klvxv [+] /opt/apps/spack/expat-2.6.2-7kfe3hb [+] /opt/apps/spack/curl-8.6.0-gpzsr3p [+] /opt/apps/spack/tar-1.34-wjzs4wj [+] /opt/apps/spack/gdbm-1.23-cylmqwx [+] /opt/apps/spack/sqlite-3.43.2-axuxulg [+] /opt/apps/spack/cfitsio-3.49-mmy3dbr [+] /opt/apps/spack/gettext-0.22.4-zjsp346 [+] /opt/apps/spack/perl-5.38.0-gzljgek [+] /opt/apps/spack/python-3.10.13-fz7fymx [+] /opt/apps/spack/krb5-1.20.1-tqiapsx [+] /opt/apps/spack/py-pyyaml-6.0-rju7jls [+] /opt/apps/spack/py-tomli-2.0.1-eanxpu2 [+] /opt/apps/spack/py-numpy-1.26.4-t5acjcv [+] /opt/apps/spack/python-venv-1.0-2cz5c3s [+] /opt/apps/spack/py-pip-23.0-lxkcvby [+] /opt/apps/spack/openssh-9.7p1-jxrkzso [+] /opt/apps/spack/py-pyerfa-2.0.0.1-kyfazhs [+] /opt/apps/spack/py-packaging-23.1-wkeyuk6 [+] /opt/apps/spack/py-typing-extensions-4.8.0-ujwbb6g [+] /opt/apps/spack/py-setuptools-69.2.0-3do76jw [+] /opt/apps/spack/py-wheel-0.41.2-brm3k3h [+] /opt/apps/spack/git-2.45.1-tuc5jnb [+] /opt/apps/spack/py-cython-3.0.0-zx62ssd ==> Installing py-astropy-iers-data-main-ukchsfzhfcyz6e6fxar6mtykqiavporj [52/55] ==> No binary for py-astropy-iers-data-main-ukchsfzhfcyz6e6fxar6mtykqiavporj found: installing from source ==> No patches needed for py-astropy-iers-data ==> py-astropy-iers-data: Executing phase: 'install' ==> py-astropy-iers-data: Successfully installed py-astropy-iers-data-main-ukchsfzhfcyz6e6fxar6mtykqiavporj Stage: 1.74s. Install: 0.93s. Post-install: 0.52s. Total: 3.36s [+] /opt/apps/spack/py-astropy-iers-data-main-ukchsfz [+] /opt/apps/spack/py-extension-helpers-0.1-a5hmr6j [+] /opt/apps/spack/py-setuptools-scm-8.0.4-qdhxchg ==> Installing py-astropy-6.1.0-f4pffru3kmyion2kq6muomgrfs5y4gdo [55/55] ==> No binary for py-astropy-6.1.0-f4pffru3kmyion2kq6muomgrfs5y4gdo found: installing from source ==> Fetching https://files.pythonhosted.org/packages/source/a/astropy/astropy-6.1.0.tar.gz ==> Ran patch() for py-astropy ==> py-astropy: Executing phase: 'install' ==> Warning: Module file /opt/modulefiles/spack/Core/py-astropy/6.1.0.lua exists and will not be overwritten ==> py-astropy: Successfully installed py-astropy-6.1.0-f4pffru3kmyion2kq6muomgrfs5y4gdo Stage: 1.29s. Install: 1m 5.77s. Post-install: 0.60s. Total: 1m 7.94s * Removed extra-whitespace A blank line had white space, removed the white space * Additional formatting changes for black * Additional package updates Based on previous recommendations updated py-astropy and py-astropy-iers-data packages. Also added a new version to py-pyerfa package to match the 6.1.0 dependencies better Of importance in these updates, I did add pypi and version info to py-astropy-iers-data. Originally I had argued that this package updates quite frequently (on a weekly basis) and so it did not make sense to include pypi/versions and we should instead use the non-version git-repo structure based on the master branch. However, when I tried to build the package py-setuptools-scm errored out when trying to build the package: /opt/apps/spack/py-setuptools-scm-8.0.4-ax2zqro/lib/python3.10/site-packages/setuptools_scm/git.py:163: UserWarning: "/tmp/root/spack-stage/spack-stage-py-astropy-iers-data-main-iw2mdzlukb37mkcbcozjjefjoefw2eyp/spack-src" is shallow and may cause errors I believe this is due to the download file/stage directory not containing the version and instead including the branch. I changed the package to use versions instead and it worked just fine as shown below. In addition, when I had done some preliminary testing, the package installed fine using the non-version master branch. When I checked, that installation it used py-setuptools-scm@7.1 while in this installation run it used a much more recent 8.0.4 so it is possible that somewhere between scm7.1 and 8.0.04 something changed that caused this error to show up. Since the setuptools-scm package has something to do extracting package versions, I imagine it's some kind of mismatch issue Output from build: spack install py-astropy [+] /usr (external glibc-2.28-oj2wjfl2ao5inhfz4qehw6hlck2hizvp) [+] /opt/apps/spack/gcc-runtime-8.5.0-5k6kvi5 [+] /opt/apps/spack/wcslib-7.3-zvcqq7o [+] /opt/apps/spack/xz-5.4.6-axoznvt [+] /opt/apps/spack/libffi-3.4.6-ibucrfe [+] /opt/apps/spack/erfa-2.0.0-4qkta2n [+] /opt/apps/spack/libmd-1.0.4-zbdiprt [+] /opt/apps/spack/util-linux-uuid-2.38.1-w3kgjq3 [+] /opt/apps/spack/libiconv-1.17-jskazis [+] /opt/apps/spack/berkeley-db-18.1.40-jftva2u [+] /opt/apps/spack/zstd-1.5.6-nyk6gt6 [+] /opt/apps/spack/ncurses-6.4-xbvwv2w [+] /opt/apps/spack/bzip2-1.0.8-t65bq3t [+] /opt/apps/spack/libunistring-1.2-whrov3e [+] /opt/apps/spack/pcre2-10.42-fu62kky [+] /opt/apps/spack/pkgconf-1.9.5-ckjdqjm [+] /opt/apps/spack/zlib-ng-2.1.6-ccn5qny [+] /opt/apps/spack/openblas-0.3.26-pfyk2vi [+] /opt/apps/spack/libxcrypt-4.4.35-zigqpjo [+] /opt/apps/spack/libyaml-0.2.5-fxathvq [+] /opt/apps/spack/libbsd-0.12.1-njt5grs [+] /opt/apps/spack/readline-8.2-2ys6ede [+] /opt/apps/spack/libidn2-2.3.7-vnie4rz [+] /opt/apps/spack/nghttp2-1.57.0-u72gxms [+] /opt/apps/spack/libedit-3.1-20230828-676jwbd [+] /opt/apps/spack/libxml2-2.10.3-37klvxv [+] /opt/apps/spack/openssl-3.2.1-4lqdgni [+] /opt/apps/spack/pigz-2.8-rx263bp [+] /opt/apps/spack/expat-2.6.2-7kfe3hb [+] /opt/apps/spack/sqlite-3.43.2-axuxulg [+] /opt/apps/spack/gdbm-1.23-cylmqwx [+] /opt/apps/spack/curl-8.6.0-gpzsr3p [+] /opt/apps/spack/tar-1.34-wjzs4wj [+] /opt/apps/spack/perl-5.38.0-gzljgek [+] /opt/apps/spack/cfitsio-3.49-mmy3dbr [+] /opt/apps/spack/gettext-0.22.4-zjsp346 [+] /opt/apps/spack/krb5-1.20.1-tqiapsx [+] /opt/apps/spack/python-3.10.13-fz7fymx [+] /opt/apps/spack/openssh-9.7p1-jxrkzso [+] /opt/apps/spack/py-tomli-2.0.1-eanxpu2 [+] /opt/apps/spack/py-setuptools-69.2.0-3do76jw [+] /opt/apps/spack/py-numpy-1.26.4-t5acjcv [+] /opt/apps/spack/python-venv-1.0-2cz5c3s [+] /opt/apps/spack/py-packaging-23.1-wkeyuk6 [+] /opt/apps/spack/py-pip-23.0-lxkcvby [+] /opt/apps/spack/git-2.45.1-zu6qkoc [+] /opt/apps/spack/py-markupsafe-2.1.3-isgtki6 [+] /opt/apps/spack/py-wheel-0.41.2-brm3k3h ==> Installing py-extension-helpers-0.1-a5hmr6jtrvpcq3ibwkwhvwlydthjif5a [49/57] ==> No binary for py-extension-helpers-0.1-a5hmr6jtrvpcq3ibwkwhvwlydthjif5a found: installing from source ==> Fetching https://mirror.spack.io/_source-cache/archive/ac/ac8a6fe91c6d98986a51a9f08ca0c7945f8fd70d95b662ced4040ae5eb973882.tar.gz ==> No patches needed for py-extension-helpers ==> py-extension-helpers: Executing phase: 'install' ==> py-extension-helpers: Successfully installed py-extension-helpers-0.1-a5hmr6jtrvpcq3ibwkwhvwlydthjif5a Stage: 0.37s. Install: 0.88s. Post-install: 0.52s. Total: 1.89s [+] /opt/apps/spack/py-extension-helpers-0.1-a5hmr6j ==> Installing py-cython-3.0.0-zx62ssdy4p6ddwuqbixel2vcsihjcs6m [50/57] ==> No binary for py-cython-3.0.0-zx62ssdy4p6ddwuqbixel2vcsihjcs6m found: installing from source ==> Fetching https://mirror.spack.io/_source-cache/archive/35/350b18f9673e63101dbbfcf774ee2f57c20ac4636d255741d76ca79016b1bd82.tar.gz ==> No patches needed for py-cython ==> py-cython: Executing phase: 'install' ==> py-cython: Successfully installed py-cython-3.0.0-zx62ssdy4p6ddwuqbixel2vcsihjcs6m Stage: 1.07s. Install: 2m 49.80s. Post-install: 0.40s. Total: 2m 51.37s [+] /opt/apps/spack/py-cython-3.0.0-zx62ssd [+] /opt/apps/spack/py-jinja2-3.1.2-wacpq7j [+] /opt/apps/spack/py-typing-extensions-4.8.0-ujwbb6g [+] /opt/apps/spack/py-pyyaml-6.0-rju7jls [+] /opt/apps/spack/py-setuptools-scm-8.0.4-ax2zqro ==> Installing py-astropy-iers-data-0.2024.5.20.0.29.40-wckxjf6icqn3aqhyjidfir3byyjq5aq6 [55/57] ==> No binary for py-astropy-iers-data-0.2024.5.20.0.29.40-wckxjf6icqn3aqhyjidfir3byyjq5aq6 found: installing from source ==> Using cached archive: /opt/spack/var/spack/cache/_source-cache/archive/7f/7fff3d3404ae8560533ac0e685db7acc02c4d8984faa4ac3d607096879fba2d1.tar.gz ==> No patches needed for py-astropy-iers-data ==> py-astropy-iers-data: Executing phase: 'install' ==> py-astropy-iers-data: Successfully installed py-astropy-iers-data-0.2024.5.20.0.29.40-wckxjf6icqn3aqhyjidfir3byyjq5aq6 Stage: 0.07s. Install: 1.21s. Post-install: 0.39s. Total: 1.88s [+] /opt/apps/spack/py-astropy-iers-data-0.2024.5.20.0.29.40-wckxjf6 ==> Installing py-pyerfa-2.0.1.1-pkokp6usk7m2bjxcba3nwgqgrjufumcp [56/57] ==> No binary for py-pyerfa-2.0.1.1-pkokp6usk7m2bjxcba3nwgqgrjufumcp found: installing from source ==> Fetching https://files.pythonhosted.org/packages/source/p/pyerfa/pyerfa-2.0.1.1.tar.gz ==> No patches needed for py-pyerfa ==> py-pyerfa: Executing phase: 'install' ==> py-pyerfa: Successfully installed py-pyerfa-2.0.1.1-pkokp6usk7m2bjxcba3nwgqgrjufumcp Stage: 0.93s. Install: 17.72s. Post-install: 0.33s. Total: 19.15s [+] /opt/apps/spack/py-pyerfa-2.0.1.1-pkokp6u ==> Installing py-astropy-6.1.0-5brbkjnjzfg3lc6h34qku24ep5pwsxzs [57/57] ==> No binary for py-astropy-6.1.0-5brbkjnjzfg3lc6h34qku24ep5pwsxzs found: installing from source ==> Fetching https://files.pythonhosted.org/packages/source/a/astropy/astropy-6.1.0.tar.gz ==> Ran patch() for py-astropy ==> py-astropy: Executing phase: 'install' ==> py-astropy: Successfully installed py-astropy-6.1.0-5brbkjnjzfg3lc6h34qku24ep5pwsxzs Stage: 1.16s. Install: 1m 3.34s. Post-install: 1.05s. Total: 1m 5.77s [+] /opt/apps/spack/py-astropy-6.1.0-5brbkjn * Updated to match with black formatting
2024-05-29intel-oneapi-mkl: change logic for gfortran compatibility (#44242)Robert Cohn1-3/+11
* [intel-oneapi-mkl]: change logic for gfortran compatibility * review comments Co-authored-by: Rocco Meli <r.meli@bluemail.ch> * warn if fortran-rt and gcc are used without gfortran * remove warning --------- Co-authored-by: Rocco Meli <r.meli@bluemail.ch>
2024-05-29flux-sched: add v0.34.0 (#44205)Vanessasaurus1-0/+2
Signed-off-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: github-actions <github-actions@users.noreply.github.com> Co-authored-by: vsoch <vsoch@users.noreply.github.com> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-05-29remove non-existent when kwarg (#44437)Harmen Stoppels2-16/+4
Not sure why this was added, it is ignored.
2024-05-29postgresql: fix thinko with `thread-safety` option (#44381)Chris Green1-2/+1
2024-05-29mmseqs2: add v15-6f452 (#44362)Diego Alvarez S1-1/+2
2024-05-29acts: add v34.1.0, v35.0.0 (identification, sycl variants changes) (#44407)Wouter Deconinck1-4/+17
* acts: add v34.1.0, v35.0.0 (identification, sycl variants changes) * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-05-29adios2: update to latest version 2.10.1 (#44426)Vicente Bolea1-2/+3
2024-05-29py-pythran: add 0.16, fix compat bounds (#43983)Harmen Stoppels1-0/+4
2024-05-28fix: mariadb confilct (#44418)Teague Sterling1-1/+1
This is a small fix the the conflicts of mariadb recently pushed. The max conflict version for gcc>=13 was off by one.
2024-05-28libxcb, xcb-proto: add v1.17.1 (#44394)Wouter Deconinck8-24/+39
* libxcb, xcb-proto: add v1.17.1 * libxcb, xcb-proto: inherit XorgPackage * xcb-proto: http -> https
2024-05-28acts: pass cuda_arch to CMAKE_CUDA_ARCHITECTURES (#44397)Wouter Deconinck1-0/+2
2024-05-28New package: tiny tensor compiler (#44401)Carsten Uphoff1-0/+46
Signed-off-by: Carsten Uphoff <carsten.uphoff@intel.com>