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##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Adios(AutotoolsPackage):
"""The Adaptable IO System (ADIOS) provides a simple,
flexible way for scientists to describe the
data in their code that may need to be written,
read, or processed outside of the running simulation.
"""
homepage = "http://www.olcf.ornl.gov/center-projects/adios/"
url = "https://github.com/ornladios/ADIOS/archive/v1.12.0.tar.gz"
version('develop', git='https://github.com/ornladios/ADIOS.git',
branch='master')
version('1.12.0', '84a1c71b6698009224f6f748c5257fc9')
version('1.11.1', '5639bfc235e50bf17ba9dafb14ea4185')
version('1.11.0', '5eead5b2ccf962f5e6d5f254d29d5238')
version('1.10.0', 'eff450a4c0130479417cfd63186957f3')
version('1.9.0', '310ff02388bbaa2b1c1710ee970b5678')
variant('shared', default=True,
description='Builds a shared version of the library')
variant('fortran', default=False,
description='Enable Fortran bindings support')
variant('mpi', default=True, description='Enable MPI support')
variant('infiniband', default=False, description='Enable infiniband support')
# transforms
variant('zlib', default=True, description='Enable zlib transform support')
variant('bzip2', default=False, description='Enable bzip2 transform support')
variant('szip', default=False, description='Enable szip transform support')
variant('zfp', default=True, description='Enable ZFP transform support')
variant('sz', default=True, description='Enable SZ transform support')
# transports and serial file converters
variant('hdf5', default=False, description='Enable parallel HDF5 transport and serial bp2h5 converter')
variant('netcdf', default=False, description='Enable netcdf support')
variant('flexpath', default=False, description='Enable flexpath transport')
variant('dataspaces', default=False, description='Enable dataspaces transport')
variant('staging', default=False, description='Enable dataspaces and flexpath staging transports')
depends_on('autoconf', type='build')
depends_on('automake', type='build')
depends_on('libtool@:2.4.2', type='build')
depends_on('python', type='build')
depends_on('mpi', when='+mpi')
# optional transformations
depends_on('zlib', when='+zlib')
depends_on('bzip2', when='+bzip2')
depends_on('szip', when='+szip')
depends_on('sz', when='+sz')
depends_on('zfp@:0.5.0', when='+zfp')
# optional transports & file converters
depends_on('hdf5@1.8:+mpi', when='+hdf5')
depends_on('netcdf', when='+netcdf')
depends_on('libevpath', when='+flexpath')
depends_on('libevpath', when='+staging')
depends_on('dataspaces+mpi', when='+dataspaces')
depends_on('dataspaces+mpi', when='+staging')
for p in ['+hdf5', '+netcdf', '+flexpath', '+dataspaces', '+staging']:
conflicts(p, when='~mpi')
build_directory = 'spack-build'
# ADIOS uses the absolute Python path, which is too long and results in
# "bad interpreter" errors - but not applicable for 1.9.0
patch('python.patch', when='@1.10.0:')
# Fix ADIOS <=1.10.0 compile error on HDF5 1.10+
# https://github.com/ornladios/ADIOS/commit/3b21a8a41509
# https://github.com/LLNL/spack/issues/1683
patch('adios_1100.patch', when='@:1.10.0^hdf5@1.10:')
def validate(self, spec):
"""
Checks if incompatible variants have been activated at the same time
:param spec: spec of the package
:raises RuntimeError: in case of inconsistencies
"""
if '+fortran' in spec and not self.compiler.fc:
msg = 'cannot build a fortran variant without a fortran compiler'
raise RuntimeError(msg)
def configure_args(self):
spec = self.spec
self.validate(spec)
extra_args = [
# required, otherwise building its python bindings will fail
'CFLAGS={0}'.format(self.compiler.pic_flag)
]
if '+shared' in spec:
extra_args.append('--enable-shared')
if '+mpi' in spec:
extra_args.append('--with-mpi=%s' % spec['mpi'].prefix)
else:
extra_args.append('--without-mpi')
if '+infiniband' in spec:
extra_args.append('--with-infiniband')
else:
extra_args.append('--with-infiniband=no')
if '+fortran' in spec:
extra_args.append('--enable-fortran')
else:
extra_args.append('--disable-fortran')
# Transforms
if '+zlib' in spec:
extra_args.append('--with-zlib=%s' % spec['zlib'].prefix)
else:
extra_args.append('--without-zlib')
if '+bzip2' in spec:
extra_args.append('--with-bzip2=%s' % spec['bzip2'].prefix)
else:
extra_args.append('--without-bzip2')
if '+szip' in spec:
extra_args.append('--with-szip=%s' % spec['szip'].prefix)
else:
extra_args.append('--without-szip')
if '+zfp' in spec:
extra_args.append('--with-zfp=%s' % spec['zfp'].prefix)
else:
extra_args.append('--without-zfp')
if '+sz' in spec:
extra_args.append('--with-sz=%s' % spec['sz'].prefix)
else:
extra_args.append('--without-sz')
# External I/O libraries
if '+hdf5' in spec:
extra_args.append('--with-phdf5=%s' % spec['hdf5'].prefix)
else:
extra_args.append('--without-phdf5')
if '+netcdf' in spec:
extra_args.append('--with-netcdf=%s' % spec['netcdf'].prefix)
else:
extra_args.append('--without-netcdf')
# Staging transports
if '+flexpath' in spec or '+staging' in spec:
extra_args.append('--with-flexpath=%s' % spec['libevpath'].prefix)
else:
extra_args.append('--without-flexpath')
if '+dataspaces' in spec or '+staging' in spec:
extra_args.append('--with-dataspaces=%s'
% spec['dataspaces'].prefix)
else:
extra_args.append('--without-dataspaces')
return extra_args
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