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##############################################################################
# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Alquimia(CMakePackage):
"""Alquimia is an interface that exposes the capabilities
of mature geochemistry codes such as CrunchFlow and PFLOTRAN"""
homepage = "https://github.com/LBL-EESA/alquimia-dev"
version('xsdk-0.2.0', git='https://github.com/LBL-EESA/alquimia-dev.git', tag='xsdk-0.2.0')
version('develop', git='https://github.com/LBL-EESA/alquimia-dev.git')
variant('shared', default=True,
description='Enables the build of shared libraries')
depends_on('mpi')
depends_on('hdf5')
depends_on('pflotran@xsdk-0.2.0', when='@xsdk-0.2.0')
depends_on('pflotran@develop', when='@develop')
depends_on('petsc@xsdk-0.2.0', when='@xsdk-0.2.0')
depends_on('petsc@develop', when='@develop')
def cmake_args(self):
spec = self.spec
options = ['-DCMAKE_C_COMPILER=%s' % spec['mpi'].mpicc,
'-DCMAKE_Fortran_COMPILER=%s' % spec['mpi'].mpifc,
'-DUSE_XSDK_DEFAULTS=YES',
'-DBUILD_SHARED_LIBS:BOOL=%s' % (
'ON' if '+shared' in spec else 'OFF'),
'-DTPL_ENABLE_MPI:BOOL=ON',
'-DMPI_BASE_DIR:PATH=%s' % spec['mpi'].prefix,
'-DTPL_ENABLE_HDF5:BOOL=ON',
'-DXSDK_WITH_PFLOTRAN:BOOL=ON',
# This is not good.
# It assumes that the .a file exists and is not a .so
'-DTPL_PFLOTRAN_LIBRARIES=%s' % (
spec['pflotran'].prefix.lib + "/libpflotranchem.a"),
'-DTPL_PFLOTRAN_INCLUDE_DIRS=%s' % (
spec['pflotran'].prefix.include),
'-DTPL_ENABLE_PETSC:BOOL=ON',
'-DPETSC_EXECUTABLE_RUNS=ON',
'-DCMAKE_INSTALL_NAME_DIR:PATH=%s/lib' % self.prefix]
return options
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