1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
|
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Alquimia(CMakePackage):
"""Alquimia is an interface that exposes the capabilities
of mature geochemistry codes such as CrunchFlow and PFLOTRAN"""
homepage = "https://github.com/LBL-EESA/alquimia-dev"
git = "https://github.com/LBL-EESA/alquimia-dev.git"
version('develop')
version('xsdk-0.3.0', tag='xsdk-0.3.0')
version('xsdk-0.2.0', tag='xsdk-0.2.0')
variant('shared', default=True,
description='Enables the build of shared libraries')
depends_on('mpi')
depends_on('hdf5')
depends_on('pflotran@xsdk-0.3.0', when='@xsdk-0.3.0')
depends_on('pflotran@xsdk-0.2.0', when='@xsdk-0.2.0')
depends_on('pflotran@develop', when='@develop')
depends_on('petsc@3.8.0:', when='@xsdk-0.3.0')
depends_on('petsc@xsdk-0.2.0', when='@xsdk-0.2.0')
depends_on('petsc@develop', when='@develop')
def cmake_args(self):
spec = self.spec
options = ['-DCMAKE_C_COMPILER=%s' % spec['mpi'].mpicc,
'-DCMAKE_Fortran_COMPILER=%s' % spec['mpi'].mpifc,
'-DUSE_XSDK_DEFAULTS=YES',
'-DBUILD_SHARED_LIBS:BOOL=%s' % (
'ON' if '+shared' in spec else 'OFF'),
'-DTPL_ENABLE_MPI:BOOL=ON',
'-DMPI_BASE_DIR:PATH=%s' % spec['mpi'].prefix,
'-DTPL_ENABLE_HDF5:BOOL=ON',
'-DXSDK_WITH_PFLOTRAN:BOOL=ON',
# This is not good.
# It assumes that the .a file exists and is not a .so
'-DTPL_PFLOTRAN_LIBRARIES=%s' % (
spec['pflotran'].prefix.lib + "/libpflotranchem.a"),
'-DTPL_PFLOTRAN_INCLUDE_DIRS=%s' % (
spec['pflotran'].prefix.include),
'-DTPL_ENABLE_PETSC:BOOL=ON',
'-DPETSC_EXECUTABLE_RUNS=ON',
'-DCMAKE_INSTALL_NAME_DIR:PATH=%s/lib' % self.prefix]
return options
|
