var/spack/repos/builtin/packages/bamutil/libstatgen-issue-19.patch


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From 3a10afe08c209dbacc3eca7794a5a8c0a42ee566 Mon Sep 17 00:00:00 2001
From: jonathonl <jonathonl@users.noreply.github.com>
Date: Thu, 20 Sep 2018 11:57:06 -0400
Subject: [PATCH] Removes erroneous deletes in Chromosome constructor.

---
 general/Chromosome.cpp | 2 --
 1 file changed, 2 deletions(-)

diff --git a/general/Chromosome.cpp b/general/Chromosome.cpp
index ac2ff5c..2d773e8 100644
--- a/libStatGen/general/Chromosome.cpp
+++ b/libStatGen/general/Chromosome.cpp
@@ -27,7 +27,6 @@ Chromosome::Chromosome(GenomeSequence* gs, const char* chromosomeName)
 Chromosome::Chromosome(const char* genomseSequenceFileName, unsigned int chromosomeIndex, bool isColorSpace) 
 {
     std::string s(genomseSequenceFileName);
-    if (this->gs) delete gs;
     gs = new GenomeSequence;
     assert(gs);
     gs->setReferenceName(s);
@@ -39,7 +38,6 @@ Chromosome::Chromosome(const char* genomseSequenceFileName, unsigned int chromos
 
 Chromosome::Chromosome(const std::string& genomseSequenceFileName, unsigned int chromosomeIndex, bool isColorSpace) 
 {
-    if (this->gs) delete gs;
     gs = new GenomeSequence;
     assert(gs);
     gs->setReferenceName(genomseSequenceFileName);