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# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack.package import *
class BppSuite(CMakePackage):
"""BppSuite is a suite of ready-to-use programs for phylogenetic and
sequence analysis."""
homepage = "http://biopp.univ-montp2.fr/wiki/index.php/BppSuite"
url = "https://github.com/BioPP/bppsuite/archive/refs/tags/v2.4.1.tar.gz"
maintainers("snehring")
license("CECILL-2.0")
version("2.4.1", sha256="0485adcc17e37439069d27e4fac144e5ae38036ba21f31e6d21f070ce4ea5199")
version(
"2.2.0",
sha256="761fa5eec794af221d971ae70fd8c43171ad71a6bb5f20549263a1797b43f138",
deprecated=True,
)
depends_on("cmake@2.6:", type="build")
depends_on("texinfo", type="build")
depends_on("bpp-core")
depends_on("bpp-seq")
depends_on("bpp-phyl")
depends_on("bpp-popgen", when="@2.4.1:")
# Clarify isinf's namespace, because Fujitsu compiler can't
# resolve ambiguous of 'isinf' function.
patch("clarify_isinf.patch", when="%fj")
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