1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
|
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
import glob
class Chombo(MakefilePackage):
"""The Chombo package provides a set of tools for implementing finite
difference and finite-volume methods for the solution of partial
differential equations on block-structured adaptively refined
logically rectangular (i.e. Cartesian) grids."""
homepage = "https://commons.lbl.gov/display/chombo"
git = "http://bitbucket.org/drhansj/chombo-xsdk.git"
tags = ['ecp', 'ecp-apps']
# Use whatever path Brian V. and Terry L. agreed upon, but preserve version
version('3.2', commit='71d856c')
version('develop', tag='master')
variant('mpi', default=True, description='Enable MPI parallel support')
variant('hdf5', default=True, description='Enable HDF5 support')
variant('dims',
default='3',
values=('1', '2', '3', '4', '5', '6'),
multi=False,
description='Number of PDE dimensions [1-6]'
)
patch('hdf5-16api.patch', when='@3.2', level=0)
patch('Make.defs.local.template.patch', when='@3.2', level=0)
depends_on('blas')
depends_on('lapack')
depends_on('gmake', type='build')
depends_on('mpi', when='+mpi')
depends_on('hdf5', when='+hdf5')
depends_on('hdf5+mpi', when='+mpi+hdf5')
def edit(self, spec, prefix):
# Set fortran name mangling in Make.defs
defs_file = FileFilter('./lib/mk/Make.defs')
defs_file.filter('^\s*#\s*cppcallsfort\s*=\s*',
'cppcallsfort = -DCH_FORT_UNDERSCORE')
# Set remaining variables in Make.defs.local
# Make.defs.local.template.patch ensures lines for USE_TIMER,
# USE_LAPACK and lapackincflags are present
copy('./lib/mk/Make.defs.local.template',
'./lib/mk/Make.defs.local')
defs_file = FileFilter('./lib/mk/Make.defs.local')
# Unconditional settings
defs_file.filter('^\s*#\s*DEBUG\s*=\s*', 'DEBUG = FALSE')
defs_file.filter('^\s*#\s*OPT\s*=\s*', 'OPT = TRUE')
defs_file.filter('^\s*#\s*PIC\s*=\s*', 'PIC = TRUE')
# timer code frequently fails compiles. So disable it.
defs_file.filter('^\s*#\s*USE_TIMER\s*=\s*', 'USE_TIMER = FALSE')
# LAPACK setup
lapack_blas = spec['lapack'].libs + spec['blas'].libs
defs_file.filter('^\s*#\s*USE_LAPACK\s*=\s*', 'USE_LAPACK = TRUE')
defs_file.filter(
'^\s*#\s*lapackincflags\s*=\s*',
'lapackincflags = -I%s' % spec['lapack'].prefix.include)
defs_file.filter(
'^\s*#\s*syslibflags\s*=\s*',
'syslibflags = %s' % lapack_blas.ld_flags)
# Compilers and Compiler flags
defs_file.filter('^\s*#\s*CXX\s*=\s*', 'CXX = %s' % spack_cxx)
defs_file.filter('^\s*#\s*FC\s*=\s*', 'FC = %s' % spack_fc)
if '+mpi' in spec:
defs_file.filter(
'^\s*#\s*MPICXX\s*=\s*',
'MPICXX = %s' % self.spec['mpi'].mpicxx)
# Conditionally determined settings
defs_file.filter(
'^\s*#\s*MPI\s*=\s*',
'MPI = %s' % ('TRUE' if '+mpi' in spec else 'FALSE'))
defs_file.filter(
'^\s*#\s*DIM\s*=\s*',
'DIM = %s' % spec.variants['dims'].value)
# HDF5 settings
if '+hdf5' in spec:
defs_file.filter('^\s*#\s*USE_HDF5\s*=\s*', 'USE_HDF5 = TRUE')
defs_file.filter(
'^\s*#\s*HDFINCFLAGS\s*=.*',
'HDFINCFLAGS = -I%s' % spec['hdf5'].prefix.include)
defs_file.filter(
'^\s*#\s*HDFLIBFLAGS\s*=.*',
'HDFLIBFLAGS = %s' % spec['hdf5'].libs.ld_flags)
if '+mpi' in spec:
defs_file.filter(
'^\s*#\s*HDFMPIINCFLAGS\s*=.*',
'HDFMPIINCFLAGS = -I%s' % spec['hdf5'].prefix.include)
defs_file.filter(
'^\s*#\s*HDFMPILIBFLAGS\s*=.*',
'HDFMPILIBFLAGS = %s' % spec['hdf5'].libs.ld_flags)
def build(self, spec, prefix):
with working_dir('lib'):
gmake('all')
def install(self, spec, prefix):
with working_dir('lib'):
install_tree('include', prefix.include)
libfiles = glob.glob('lib*.a')
libfiles += glob.glob('lib*.so')
libfiles += glob.glob('lib*.dylib')
mkdirp(prefix.lib)
for lib in libfiles:
install(lib, prefix.lib)
|