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--- a/src/sgeutils/fsl_sub 2020-07-25 09:36:17.000000000 -0500
+++ b/src/sgeutils/fsl_sub 2020-11-15 17:04:41.484972803 -0600
@@ -81,7 +81,7 @@
# "NONE". Note that a user can unset SGE_ROOT if they don't want the
# cluster to be used.
###########################################################################
-METHOD=SGE
+METHOD=NONE
unset module
if [[ "x$SGE_ROOT" = "x" ]] ; then
METHOD=NONE
@@ -145,7 +145,10 @@
usage ()
{
- cat <<EOF
+ case "$METHOD" in
+ SGE)
+
+ cat <<EOF
$command V1.1 - wrapper for job control system such as SGE
@@ -190,7 +193,24 @@
bigmem.q: This queue is like the verylong.q but has no memory limits.
EOF
+ ;;
+ NONE)
+
+ cat <<EOF
+$command V1.1 - wrapper for job control system such as SGE
+
+Usage: $command [options] <command>
+
+$command gzip *.img *.hdr
+
+ -t <filename> Specify a task file of commands to execute in parallel
+ -l <logdirname> Where to output logfiles
+ -v Verbose mode.
+
+EOF
+ ;;
+ esac
exit 1
}
@@ -199,14 +219,29 @@
usage
fi
-#if the newer whitespace-safe getopt format is available, use it
-if [[ $(getopt -T >/dev/null 2>&1; echo $?) == 4 ]]; then
- eval set -- $(getopt -s bash T:q:a:p:M:j:t:z:N:R:Fvm:l:s: "$@")
- result=$?
-else
- set -- $(getopt T:q:a:p:M:j:t:z:N:R:Fvm:l:s: "$@")
- result=$?
-fi
+case "$METHOD" in
+ SGE)
+ #if the newer whitespace-safe getopt format is available, use it
+ if [[ $(getopt -T >/dev/null 2>&1; echo $?) == 4 ]]; then
+ eval set -- $(getopt -s bash T:q:a:p:M:j:t:z:N:R:Fvm:l:s: "$@")
+ result=$?
+ else
+ set -- $(getopt T:q:a:p:M:j:t:z:N:R:Fvm:l:s: "$@")
+ result=$?
+ fi
+ ;;
+ NONE)
+ #if the newer whitespace-safe getopt format is available, use it
+ if [[ $(getopt -T >/dev/null 2>&1; echo $?) == 4 ]]; then
+ eval set -- $(getopt -s bash t:vl: "$@")
+ result=$?
+ else
+ set -- $(getopt t:vl: "$@")
+ result=$?
+ fi
+ ;;
+esac
+
if [[ "$result" != 0 ]] ; then
echo "What? Your arguments make no sense!"
fi
|
