1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
|
# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
import os
from spack import *
class Hydrogen(CMakePackage, CudaPackage, ROCmPackage):
"""Hydrogen: Distributed-memory dense and sparse-direct linear algebra
and optimization library. Based on the Elemental library."""
homepage = "http://libelemental.org"
url = "https://github.com/LLNL/Elemental/archive/v1.0.1.tar.gz"
git = "https://github.com/LLNL/Elemental.git"
maintainers = ['bvanessen']
version('develop', branch='hydrogen')
version('1.5.1', sha256='447da564278f98366906d561d9c8bc4d31678c56d761679c2ff3e59ee7a2895c')
version('1.5.0', sha256='03dd487fb23b9fdbc715554a8ea48c3196a1021502e61b0172ef3fdfbee75180')
version('1.4.0', sha256='c13374ff4a6c4d1076e47ba8c8d91a7082588b9958d1ed89cffb12f1d2e1452e')
version('1.3.4', sha256='7979f6656f698f0bbad6798b39d4b569835b3013ff548d98089fce7c283c6741')
version('1.3.3', sha256='a51a1cfd40ac74d10923dfce35c2c04a3082477683f6b35e7b558ea9f4bb6d51')
version('1.3.2', sha256='50bc5e87955f8130003d04dfd9dcad63107e92b82704f8107baf95b0ccf98ed6')
version('1.3.1', sha256='a8b8521458e9e747f2b24af87c4c2749a06e500019c383e0cefb33e5df6aaa1d')
version('1.3.0', sha256='0f3006aa1d8235ecdd621e7344c99f56651c6836c2e1bc0cf006331b70126b36')
version('1.2.0', sha256='8545975139582ee7bfe5d00f8d83a8697afc285bf7026b0761e9943355974806')
version('1.1.0-1', sha256='73ce05e4166853a186469269cb00a454de71e126b2019f95bbae703b65606808')
version('1.1.0', sha256='b4c12913acd01c72d31f4522266bfeb8df1d4d3b4aef02e07ccbc9a477894e71')
version('1.0.1', sha256='27cf76e1ef1d58bd8f9b1e34081a14a682b7ff082fb5d1da56713e5e0040e528')
version('1.0', sha256='d8a97de3133f2c6b6bb4b80d32b4a4cc25eb25e0df4f0cec0f8cb19bf34ece98')
variant('shared', default=True,
description='Enables the build of shared libraries')
variant('openmp', default=True,
description='Make use of OpenMP within CPU-kernels')
variant('openmp_blas', default=False,
description='Use OpenMP for threading in the BLAS library')
variant('quad', default=False,
description='Enable quad precision')
variant('int64', default=False,
description='Use 64bit integers')
variant('int64_blas', default=False,
description='Use 64bit integers for BLAS.')
variant('scalapack', default=False,
description='Build with ScaLAPACK library')
variant('build_type', default='Release',
description='The build type to build',
values=('Debug', 'Release'))
variant('blas', default='openblas', values=('openblas', 'mkl', 'accelerate', 'essl', 'libsci'),
description='Enable the use of OpenBlas/MKL/Accelerate/ESSL/LibSci')
variant('mpfr', default=False,
description='Support GNU MPFR\'s'
'arbitrary-precision floating-point arithmetic')
variant('test', default=False,
description='Builds test suite')
variant('al', default=False,
description='Builds with Aluminum communication library')
variant('omp_taskloops', default=False,
description='Use OpenMP taskloops instead of parallel for loops.')
variant('half', default=False,
description='Builds with support for FP16 precision data types')
conflicts('~openmp', when='+omp_taskloops')
conflicts('+cuda', when='+rocm', msg='CUDA and ROCm support are mutually exclusive')
depends_on('cmake@3.17.0:', type='build')
depends_on('mpi')
depends_on('hwloc@1.11:')
depends_on('hwloc +cuda +nvml', when='+cuda')
depends_on('hwloc@2.3.0:', when='+rocm')
# Note that #1712 forces us to enumerate the different blas variants
depends_on('openblas', when='blas=openblas')
depends_on('openblas +ilp64', when='blas=openblas +int64_blas')
depends_on('openblas threads=openmp', when='blas=openblas +openmp_blas')
depends_on('intel-mkl', when="blas=mkl")
depends_on('intel-mkl +ilp64', when="blas=mkl +int64_blas")
depends_on('intel-mkl threads=openmp', when='blas=mkl +openmp_blas')
depends_on('veclibfort', when='blas=accelerate')
conflicts('blas=accelerate +openmp_blas')
depends_on('essl', when='blas=essl')
depends_on('essl +ilp64', when='blas=essl +int64_blas')
depends_on('essl threads=openmp', when='blas=essl +openmp_blas')
depends_on('netlib-lapack +external-blas', when='blas=essl')
depends_on('cray-libsci', when='blas=libsci')
depends_on('cray-libsci +openmp', when='blas=libsci +openmp_blas')
# Specify the correct version of Aluminum
depends_on('aluminum@:0.3.99', when='@:1.3.99 +al')
depends_on('aluminum@0.4:0.4.99', when='@1.4:1.4.99 +al')
depends_on('aluminum@0.6.0:0.6.99', when='@1.5.0:1.5.1 +al')
depends_on('aluminum@0.7.0:', when='@:1.0,1.5.2: +al')
# Add Aluminum variants
depends_on('aluminum +cuda +nccl +cuda_rma', when='+al +cuda')
depends_on('aluminum +rocm +rccl', when='+al +rocm')
for arch in CudaPackage.cuda_arch_values:
depends_on('aluminum cuda_arch=%s' % arch, when='+al +cuda cuda_arch=%s' % arch)
# variants +rocm and amdgpu_targets are not automatically passed to
# dependencies, so do it manually.
for val in ROCmPackage.amdgpu_targets:
depends_on('aluminum amdgpu_target=%s' % val, when='+al +rocm amdgpu_target=%s' % val)
# Note that this forces us to use OpenBLAS until #1712 is fixed
depends_on('lapack', when='blas=openblas ~openmp_blas')
depends_on('scalapack', when='+scalapack')
depends_on('gmp', when='+mpfr')
depends_on('mpc', when='+mpfr')
depends_on('mpfr', when='+mpfr')
depends_on('cuda', when='+cuda')
depends_on('cub', when='^cuda@:10.99')
depends_on('hipcub', when='+rocm')
depends_on('half', when='+half')
depends_on('llvm-openmp', when='%apple-clang +openmp')
conflicts('@0:0.98', msg="Hydrogen did not exist before v0.99. " +
"Did you mean to use Elemental instead?")
generator = 'Ninja'
depends_on('ninja', type='build')
@property
def libs(self):
shared = True if '+shared' in self.spec else False
return find_libraries(
'libEl', root=self.prefix, shared=shared, recursive=True
)
def cmake_args(self):
spec = self.spec
enable_gpu_fp16 = ('+cuda' in spec and '+half' in spec)
args = [
'-DCMAKE_CXX_STANDARD=14',
'-DCMAKE_INSTALL_MESSAGE:STRING=LAZY',
'-DBUILD_SHARED_LIBS:BOOL=%s' % ('+shared' in spec),
'-DHydrogen_ENABLE_OPENMP:BOOL=%s' % ('+openmp' in spec),
'-DHydrogen_ENABLE_QUADMATH:BOOL=%s' % ('+quad' in spec),
'-DHydrogen_USE_64BIT_INTS:BOOL=%s' % ('+int64' in spec),
'-DHydrogen_USE_64BIT_BLAS_INTS:BOOL=%s' % ('+int64_blas' in spec),
'-DHydrogen_ENABLE_MPC:BOOL=%s' % ('+mpfr' in spec),
'-DHydrogen_GENERAL_LAPACK_FALLBACK=ON',
'-DHydrogen_ENABLE_ALUMINUM=%s' % ('+al' in spec),
'-DHydrogen_ENABLE_CUB=%s' % ('+cuda' in spec or '+rocm' in spec),
'-DHydrogen_ENABLE_CUDA=%s' % ('+cuda' in spec),
'-DHydrogen_ENABLE_ROCM=%s' % ('+rocm' in spec),
'-DHydrogen_ENABLE_TESTING=%s' % ('+test' in spec),
'-DHydrogen_ENABLE_HALF=%s' % ('+half' in spec),
'-DHydrogen_ENABLE_GPU_FP16=%s' % enable_gpu_fp16,
]
if '+cuda' in spec:
args.append('-DCMAKE_CUDA_STANDARD=14')
archs = spec.variants['cuda_arch'].value
if archs != 'none':
arch_str = ";".join(archs)
args.append('-DCMAKE_CUDA_ARCHITECTURES=%s' % arch_str)
if '+rocm' in spec:
args.extend([
'-DHIP_ROOT_DIR={0}'.format(spec['hip'].prefix),
'-DHIP_CXX_COMPILER={0}'.format(self.spec['hip'].hipcc)])
archs = self.spec.variants['amdgpu_target'].value
if archs != 'none':
arch_str = ",".join(archs)
cxxflags_str = " ".join(self.spec.compiler_flags['cxxflags'])
args.append(
'-DHIP_HIPCC_FLAGS=--amdgpu-target={0}'
' -g -fsized-deallocation -fPIC {1}'.format(arch_str, cxxflags_str)
)
# Add support for OS X to find OpenMP (LLVM installed via brew)
if self.spec.satisfies('%clang +openmp platform=darwin'):
clang = self.compiler.cc
clang_bin = os.path.dirname(clang)
clang_root = os.path.dirname(clang_bin)
args.extend([
'-DOpenMP_DIR={0}'.format(clang_root)])
if 'blas=openblas' in spec:
args.extend([
'-DHydrogen_USE_OpenBLAS:BOOL=%s' % ('blas=openblas' in spec),
'-DOpenBLAS_DIR:STRING={0}'.format(
spec['openblas'].prefix)])
elif 'blas=mkl' in spec:
args.extend([
'-DHydrogen_USE_MKL:BOOL=%s' % ('blas=mkl' in spec)])
elif 'blas=accelerate' in spec:
args.extend(['-DHydrogen_USE_ACCELERATE:BOOL=TRUE'])
elif 'blas=essl' in spec:
args.extend([
'-DHydrogen_USE_ESSL:BOOL=%s' % ('blas=essl' in spec)])
if '+omp_taskloops' in spec:
args.extend([
'-DHydrogen_ENABLE_OMP_TASKLOOP:BOOL=%s' %
('+omp_taskloops' in spec)])
if '+al' in spec:
args.extend([
'-DHydrogen_ENABLE_ALUMINUM:BOOL=%s' % ('+al' in spec),
'-DALUMINUM_DIR={0}'.format(
spec['aluminum'].prefix)])
return args
def setup_build_environment(self, env):
if self.spec.satisfies('%apple-clang +openmp'):
env.append_flags(
'CPPFLAGS', self.compiler.openmp_flag)
env.append_flags(
'CFLAGS', self.spec['llvm-openmp'].headers.include_flags)
env.append_flags(
'CXXFLAGS', self.spec['llvm-openmp'].headers.include_flags)
env.append_flags(
'LDFLAGS', self.spec['llvm-openmp'].libs.ld_flags)
|