summaryrefslogtreecommitdiff
path: root/var/spack/repos/builtin/packages/idba/package.py
blob: a7b2a455f71e190bf380b49203f49c3a11d63f5a (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)

from spack import *


class Idba(AutotoolsPackage):
    """IDBA is a practical iterative De Bruijn Graph De Novo Assembler for
       sequence assembly in bioinfomatics."""

    homepage = "http://i.cs.hku.hk/~alse/hkubrg/projects/idba/"
    url      = "https://github.com/loneknightpy/idba/archive/1.1.3.tar.gz"

    version('1.1.3', '303d9b4af7a7498b56ac9698028b4e15')

    depends_on('m4', type='build')
    depends_on('autoconf', type='build')
    depends_on('automake', type='build')
    depends_on('libtool', type='build')    

    conflicts('%cce')
    conflicts('%clang')
    conflicts('%intel')
    conflicts('%nag')
    conflicts('%pgi')
    conflicts('%xl')
    conflicts('%xl_r')