blob: ded7a89e2cf18db46b6e07756a93f058c8f5e960 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
|
# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class LumpySv(MakefilePackage):
"""A probabilistic framework for structural variant discovery."""
homepage = "https://github.com/arq5x/lumpy-sv"
url = "https://github.com/arq5x/lumpy-sv/archive/0.2.13.tar.gz"
version('0.2.13', sha256='3672b86ef0190ebe520648a6140077ee9f15b0549cb233dca18036e63bbf6375')
depends_on('htslib')
def edit(self, spec, prefix):
makefile = FileFilter('Makefile')
makefile.filter('export CXX .*', '')
def install(self, spec, prefix):
install_tree('bin', prefix.bin)
|
