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diff -ru spack-src/global-1/PacBio/include/charb.hpp spack-src.new/global-1/PacBio/include/charb.hpp
--- spack-src/global-1/PacBio/include/charb.hpp 2018-01-23 05:03:06.000000000 +0900
+++ spack-src.new/global-1/PacBio/include/charb.hpp 2019-08-14 10:32:47.741826823 +0900
@@ -25,6 +25,7 @@
#include <stdexcept>
#include <string>
#include <cstring>
+#include <csignal>
#include <istream>
#include <assert.h>
@@ -186,7 +187,11 @@
}
cptr += char_read;
if(cptr == b.base_)
+#ifdef __x86_64
asm("int3;");
+#else
+ raise(SIGTRAP);
+#endif
if(cptr < b.end_ - 1 || *(cptr - 1) == '\n')
break;
size_t off = cptr - b.base_;
diff -ru spack-src/global-1/SuperReads/include/charb.hpp spack-src.new/global-1/SuperReads/include/charb.hpp
--- spack-src/global-1/SuperReads/include/charb.hpp 2018-12-15 01:57:56.000000000 +0900
+++ spack-src.new/global-1/SuperReads/include/charb.hpp 2019-08-14 10:34:10.501841240 +0900
@@ -25,6 +25,7 @@
#include <stdexcept>
#include <string>
#include <cstring>
+#include <csignal>
#include <istream>
#include <assert.h>
@@ -186,7 +187,11 @@
}
cptr += char_read;
if(cptr == b.base_)
+#ifdef __x86_64
asm("int3;");
+#else
+ raise(SIGTRAP);
+#endif
if(cptr < b.end_ - 1 || *(cptr - 1) == '\n')
break;
size_t off = cptr - b.base_;
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