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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
class Mpiblast(AutotoolsPackage):
"""mpiBLAST is a freely available, open-source, parallel implementation of
NCBI BLAST"""
homepage = "http://www.mpiblast.org/"
url = "http://www.mpiblast.org/downloads/files/mpiBLAST-1.6.0.tgz"
version('1.6.0', '707105ccd56825db776b50bfd81cecd5')
patch('mpiBLAST-1.6.0-patch-110806')
depends_on('mpi')
def configure_args(self):
args = ['--with-mpi=%s' % self.spec['mpi'].prefix]
return args
def build(self, spec, prefix):
make('ncbi')
make()
def setup_environment(self, spack_env, run_env):
spack_env.set('ac_cv_path_CC', self.spec['mpi'].mpicc)
spack_env.set('ac_cv_path_CXX', self.spec['mpi'].mpicxx)
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