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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
import os
class Mvapich2(Package):
"""MVAPICH2 is an MPI implementation for Infiniband networks."""
homepage = "http://mvapich.cse.ohio-state.edu/"
url = "http://mvapich.cse.ohio-state.edu/download/mvapich/mv2/mvapich2-2.2b.tar.gz"
version('2.2b', '5651e8b7a72d7c77ca68da48f3a5d108')
version('2.2a', 'b8ceb4fc5f5a97add9b3ff1b9cbe39d2')
version('2.0', '9fbb68a4111a8b6338e476dc657388b4')
version('1.9', '5dc58ed08fd3142c260b70fe297e127c')
patch('ad_lustre_rwcontig_open_source.patch', when='@1.9')
provides('mpi@:2.2', when='@1.9') # MVAPICH2-1.9 supports MPI 2.2
provides('mpi@:3.0', when='@2.0:') # MVAPICH2-2.0 supports MPI 3.0
variant('debug', default=False, description='Enables debug information and error messages at run-time')
##########
# TODO : Process managers should be grouped into the same variant,
# as soon as variant capabilities will be extended See
# https://groups.google.com/forum/#!topic/spack/F8-f8B4_0so
SLURM = 'slurm'
HYDRA = 'hydra'
GFORKER = 'gforker'
REMSHELL = 'remshell'
SLURM_INCOMPATIBLE_PMS = (HYDRA, GFORKER, REMSHELL)
variant(SLURM, default=False, description='Sets slurm as the only process manager')
variant(HYDRA, default=False, description='Sets hydra as one of the process managers')
variant(GFORKER, default=False, description='Sets gforker as one of the process managers')
variant(REMSHELL, default=False, description='Sets remshell as one of the process managers')
##########
##########
# TODO : Network types should be grouped into the same variant, as
# soon as variant capabilities will be extended
PSM = 'psm'
SOCK = 'sock'
NEMESISIBTCP = 'nemesisibtcp'
NEMESISIB = 'nemesisib'
NEMESIS = 'nemesis'
MRAIL = 'mrail'
SUPPORTED_NETWORKS = (PSM, SOCK, NEMESIS, NEMESISIB, NEMESISIBTCP)
variant(PSM, default=False, description='Configures a build for QLogic PSM-CH3')
variant(SOCK, default=False, description='Configures a build for TCP/IP-CH3')
variant(NEMESISIBTCP, default=False, description='Configures a build for both OFA-IB-Nemesis and TCP/IP-Nemesis')
variant(NEMESISIB, default=False, description='Configures a build for OFA-IB-Nemesis')
variant(NEMESIS, default=False, description='Configures a build for TCP/IP-Nemesis')
variant(MRAIL, default=False, description='Configures a build for OFA-IB-CH3')
##########
# FIXME : CUDA support is missing
def url_for_version(self, version):
base_url = "http://mvapich.cse.ohio-state.edu/download"
if version < Version('2.0'):
return "%s/mvapich2/mv2/mvapich2-%s.tar.gz" % (base_url, version)
else:
return "%s/mvapich/mv2/mvapich2-%s.tar.gz" % (base_url, version)
@staticmethod
def enabled(x):
"""Given a variant name returns the string that means the variant is
enabled
:param x: variant name
:return:
"""
return '+' + x
def set_build_type(self, spec, configure_args):
"""Appends to configure_args the flags that depends only on the build
type (i.e. release or debug)
:param spec: spec
:param configure_args: list of current configure arguments
"""
if '+debug' in spec:
build_type_options = [
"--disable-fast",
"--enable-error-checking=runtime",
"--enable-error-messages=all",
# Permits debugging with TotalView
"--enable-g=dbg", "--enable-debuginfo"
]
else:
build_type_options = ["--enable-fast=all"]
configure_args.extend(build_type_options)
def set_process_manager(self, spec, configure_args):
"""Appends to configure_args the flags that will enable the
appropriate process managers
:param spec: spec
:param configure_args: list of current configure arguments
"""
# Check that slurm variant is not activated together with
# other pm variants
has_slurm_incompatible_variants = \
any(self.enabled(x) in spec
for x in Mvapich2.SLURM_INCOMPATIBLE_PMS)
if self.enabled(Mvapich2.SLURM) in spec and \
has_slurm_incompatible_variants:
raise RuntimeError(" %s : 'slurm' cannot be activated \
together with other process managers" % self.name)
process_manager_options = []
# See: http://slurm.schedmd.com/mpi_guide.html#mvapich2
if self.enabled(Mvapich2.SLURM) in spec:
if self.version > Version('2.0'):
process_manager_options = [
"--with-pmi=pmi2",
"--with-pm=slurm"
]
else:
process_manager_options = [
"--with-pmi=slurm",
"--with-pm=no"
]
elif has_slurm_incompatible_variants:
pms = []
# The variant name is equal to the process manager name in
# the configuration options
for x in Mvapich2.SLURM_INCOMPATIBLE_PMS:
if self.enabled(x) in spec:
pms.append(x)
process_manager_options = [
"--with-pm=%s" % ':'.join(pms)
]
configure_args.extend(process_manager_options)
def set_network_type(self, spec, configure_args):
# Check that at most one variant has been activated
count = 0
for x in Mvapich2.SUPPORTED_NETWORKS:
if self.enabled(x) in spec:
count += 1
if count > 1:
raise RuntimeError('network variants are mutually exclusive \
(only one can be selected at a time)')
network_options = []
# From here on I can suppose that only one variant has been selected
if self.enabled(Mvapich2.PSM) in spec:
network_options = ["--with-device=ch3:psm"]
elif self.enabled(Mvapich2.SOCK) in spec:
network_options = ["--with-device=ch3:sock"]
elif self.enabled(Mvapich2.NEMESISIBTCP) in spec:
network_options = ["--with-device=ch3:nemesis:ib,tcp"]
elif self.enabled(Mvapich2.NEMESISIB) in spec:
network_options = ["--with-device=ch3:nemesis:ib"]
elif self.enabled(Mvapich2.NEMESIS) in spec:
network_options = ["--with-device=ch3:nemesis"]
elif self.enabled(Mvapich2.MRAIL) in spec:
network_options = ["--with-device=ch3:mrail", "--with-rdma=gen2"]
configure_args.extend(network_options)
def setup_environment(self, spack_env, run_env):
if self.enabled(Mvapich2.SLURM) in self.spec and \
self.version > Version('2.0'):
run_env.set('SLURM_MPI_TYPE', 'pmi2')
def setup_dependent_environment(self, spack_env, run_env, extension_spec):
spack_env.set('MPICH_CC', spack_cc)
spack_env.set('MPICH_CXX', spack_cxx)
spack_env.set('MPICH_F77', spack_f77)
spack_env.set('MPICH_F90', spack_fc)
spack_env.set('MPICH_FC', spack_fc)
def setup_dependent_package(self, module, dep_spec):
self.spec.mpicc = join_path(self.prefix.bin, 'mpicc')
self.spec.mpicxx = join_path(self.prefix.bin, 'mpicxx')
self.spec.mpifc = join_path(self.prefix.bin, 'mpif90')
self.spec.mpif77 = join_path(self.prefix.bin, 'mpif77')
def install(self, spec, prefix):
# we'll set different configure flags depending on our
# environment
configure_args = [
"--prefix=%s" % prefix,
"--enable-shared",
"--enable-romio",
"--disable-silent-rules",
]
if self.compiler.f77 and self.compiler.fc:
configure_args.append("--enable-fortran=all")
elif self.compiler.f77:
configure_args.append("--enable-fortran=f77")
elif self.compiler.fc:
configure_args.append("--enable-fortran=fc")
else:
configure_args.append("--enable-fortran=none")
# Set the type of the build (debug, release)
self.set_build_type(spec, configure_args)
# Set the process manager
self.set_process_manager(spec, configure_args)
# Determine network type by variant
self.set_network_type(spec, configure_args)
configure(*configure_args)
make()
make("install")
self.filter_compilers()
def filter_compilers(self):
"""Run after install to make the MPI compilers use the
compilers that Spack built the package with.
If this isn't done, they'll have CC, CXX, F77, and FC set
to Spack's generic cc, c++, f77, and f90. We want them to
be bound to whatever compiler they were built with.
"""
bin = self.prefix.bin
mpicc = os.path.join(bin, 'mpicc')
mpicxx = os.path.join(bin, 'mpicxx')
mpif77 = os.path.join(bin, 'mpif77')
mpif90 = os.path.join(bin, 'mpif90')
spack_cc = os.environ['CC']
spack_cxx = os.environ['CXX']
spack_f77 = os.environ['F77']
spack_fc = os.environ['FC']
kwargs = {
'ignore_absent': True,
'backup': False,
'string': True
}
filter_file('CC="%s"' % spack_cc,
'CC="%s"' % self.compiler.cc, mpicc, **kwargs)
filter_file('CXX="%s"' % spack_cxx,
'CXX="%s"' % self.compiler.cxx, mpicxx, **kwargs)
filter_file('F77="%s"' % spack_f77,
'F77="%s"' % self.compiler.f77, mpif77, **kwargs)
filter_file('FC="%s"' % spack_fc,
'FC="%s"' % self.compiler.fc, mpif90, **kwargs)
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