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##############################################################################
# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/llnl/spack
# Please also see the LICENSE file for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
import os
def _verbs_dir():
"""Try to find the directory where the OpenFabrics verbs package is
installed. Return None if not found."""
try:
# Try to locate Verbs by looking for a utility in the path
ibv_devices = which("ibv_devices")
# Run it (silently) to ensure it works
ibv_devices(output=str, error=str)
# Get path to executable
path = ibv_devices.exe[0]
# Remove executable name and "bin" directory
path = os.path.dirname(path)
path = os.path.dirname(path)
return path
except:
return None
class Openmpi(AutotoolsPackage):
"""The Open MPI Project is an open source Message Passing Interface
implementation that is developed and maintained by a consortium
of academic, research, and industry partners. Open MPI is
therefore able to combine the expertise, technologies, and
resources from all across the High Performance Computing
community in order to build the best MPI library available.
Open MPI offers advantages for system and software vendors,
application developers and computer science researchers.
"""
homepage = "http://www.open-mpi.org"
url = "http://www.open-mpi.org/software/ompi/v1.10/downloads/openmpi-1.10.1.tar.bz2"
list_url = "http://www.open-mpi.org/software/ompi/"
list_depth = 3
version('2.0.1', '6f78155bd7203039d2448390f3b51c96')
version('2.0.0', 'cdacc800cb4ce690c1f1273cb6366674')
version('1.10.3', 'e2fe4513200e2aaa1500b762342c674b')
version('1.10.2', 'b2f43d9635d2d52826e5ef9feb97fd4c')
version('1.10.1', 'f0fcd77ed345b7eafb431968124ba16e')
version('1.10.0', '280cf952de68369cebaca886c5ce0304')
version('1.8.8', '0dab8e602372da1425e9242ae37faf8c')
version('1.6.5', '03aed2a4aa4d0b27196962a2a65fc475')
patch('ad_lustre_rwcontig_open_source.patch', when="@1.6.5")
patch('llnl-platforms.patch', when="@1.6.5")
patch('configure.patch', when="@1.10.0:1.10.1")
# Fabrics
variant('psm', default=False, description='Build support for the PSM library')
variant('psm2', default=False,
description='Build support for the Intel PSM2 library')
variant('pmi', default=False,
description='Build support for PMI-based launchers')
variant('verbs', default=_verbs_dir() is not None,
description='Build support for OpenFabrics verbs')
variant('mxm', default=False, description='Build Mellanox Messaging support')
# Schedulers
# TODO: support for alps and loadleveler is missing
variant('tm', default=False,
description='Build TM (Torque, PBSPro, and compatible) support')
variant('slurm', default=False,
description='Build SLURM scheduler component')
# Additional support options
variant('java', default=False, description='Build Java support')
variant('sqlite3', default=False, description='Build SQLite3 support')
variant('vt', default=True, description='Build VampirTrace support')
variant('thread_multiple', default=False,
description='Enable MPI_THREAD_MULTIPLE support')
# TODO: support for CUDA is missing
provides('mpi@:2.2', when='@1.6.5')
provides('mpi@:3.0', when='@1.7.5:')
provides('mpi@:3.1', when='@2.0.0:')
depends_on('hwloc')
depends_on('jdk', when='+java')
depends_on('sqlite', when='+sqlite3')
def url_for_version(self, version):
return "http://www.open-mpi.org/software/ompi/v%s/downloads/openmpi-%s.tar.bz2" % (
version.up_to(2), version)
def setup_dependent_environment(self, spack_env, run_env, dependent_spec):
spack_env.set('MPICC', join_path(self.prefix.bin, 'mpicc'))
spack_env.set('MPICXX', join_path(self.prefix.bin, 'mpic++'))
spack_env.set('MPIF77', join_path(self.prefix.bin, 'mpif77'))
spack_env.set('MPIF90', join_path(self.prefix.bin, 'mpif90'))
spack_env.set('OMPI_CC', spack_cc)
spack_env.set('OMPI_CXX', spack_cxx)
spack_env.set('OMPI_FC', spack_fc)
spack_env.set('OMPI_F77', spack_f77)
def setup_dependent_package(self, module, dep_spec):
self.spec.mpicc = join_path(self.prefix.bin, 'mpicc')
self.spec.mpicxx = join_path(self.prefix.bin, 'mpic++')
self.spec.mpifc = join_path(self.prefix.bin, 'mpif90')
self.spec.mpif77 = join_path(self.prefix.bin, 'mpif77')
self.spec.mpicxx_shared_libs = [
join_path(self.prefix.lib, 'libmpi_cxx.{0}'.format(dso_suffix)),
join_path(self.prefix.lib, 'libmpi.{0}'.format(dso_suffix))
]
@property
def verbs(self):
# Up through version 1.6, this option was previously named
# --with-openib
if self.spec.satisfies('@:1.6'):
return 'openib'
# In version 1.7, it was renamed to be --with-verbs
elif self.spec.satisfies('@1.7:'):
return 'verbs'
@AutotoolsPackage.precondition('autoreconf')
def die_without_fortran(self):
# Until we can pass variants such as +fortran through virtual
# dependencies depends_on('mpi'), require Fortran compiler to
# avoid delayed build errors in dependents.
if (self.compiler.f77 is None) or (self.compiler.fc is None):
raise InstallError(
'OpenMPI requires both C and Fortran compilers!'
)
def configure_args(self):
spec = self.spec
config_args = [
'--enable-shared',
'--enable-static',
'--enable-mpi-cxx',
# Schedulers
'--with-tm' if '+tm' in spec else '--without-tm',
'--with-slurm' if '+slurm' in spec else '--without-slurm',
# Fabrics
'--with-psm' if '+psm' in spec else '--without-psm',
]
# Intel PSM2 support
if spec.satisfies('@1.10:'):
if '+psm2' in spec:
config_args.append('--with-psm2')
else:
config_args.append('--without-psm2')
# PMI support
if spec.satisfies('@1.5.5:'):
if '+pmi' in spec:
config_args.append('--with-pmi')
else:
config_args.append('--without-pmi')
# Mellanox Messaging support
if spec.satisfies('@1.5.4:'):
if '+mxm' in spec:
config_args.append('--with-mxm')
else:
config_args.append('--without-mxm')
# OpenFabrics verbs support
if '+verbs' in spec:
path = _verbs_dir()
if path is not None and path not in ('/usr', '/usr/local'):
config_args.append('--with-{0}={1}'.format(self.verbs, path))
else:
config_args.append('--with-{0}'.format(self.verbs))
else:
config_args.append('--without-{0}'.format(self.verbs))
# Hwloc support
if spec.satisfies('@1.5.2:'):
config_args.append('--with-hwloc={0}'.format(spec['hwloc'].prefix))
# Java support
if spec.satisfies('@1.7.4:'):
if '+java' in spec:
config_args.extend([
'--enable-java',
'--enable-mpi-java',
'--with-jdk-dir={0}'.format(spec['jdk'].prefix)
])
else:
config_args.extend([
'--disable-java',
'--disable-mpi-java'
])
# SQLite3 support
if spec.satisfies('@1.7.3:1.999'):
if '+sqlite3' in spec:
config_args.append('--with-sqlite3')
else:
config_args.append('--without-sqlite3')
# VampirTrace support
if spec.satisfies('@1.3:1.999'):
if '+vt' not in spec:
config_args.append('--enable-contrib-no-build=vt')
# Multithreading support
if spec.satisfies('@1.5.4:'):
if '+thread_multiple' in spec:
config_args.append('--enable-mpi-thread-multiple')
else:
config_args.append('--disable-mpi-thread-multiple')
return config_args
@AutotoolsPackage.sanity_check('install')
def filter_compilers(self):
"""Run after install to make the MPI compilers use the
compilers that Spack built the package with.
If this isn't done, they'll have CC, CXX and FC set
to Spack's generic cc, c++ and f90. We want them to
be bound to whatever compiler they were built with.
"""
kwargs = {'ignore_absent': True, 'backup': False, 'string': False}
wrapper_basepath = join_path(self.prefix, 'share', 'openmpi')
wrappers = [
('mpicc-vt-wrapper-data.txt', self.compiler.cc),
('mpicc-wrapper-data.txt', self.compiler.cc),
('ortecc-wrapper-data.txt', self.compiler.cc),
('shmemcc-wrapper-data.txt', self.compiler.cc),
('mpic++-vt-wrapper-data.txt', self.compiler.cxx),
('mpic++-wrapper-data.txt', self.compiler.cxx),
('ortec++-wrapper-data.txt', self.compiler.cxx),
('mpifort-vt-wrapper-data.txt', self.compiler.fc),
('mpifort-wrapper-data.txt', self.compiler.fc),
('shmemfort-wrapper-data.txt', self.compiler.fc),
('mpif90-vt-wrapper-data.txt', self.compiler.fc),
('mpif90-wrapper-data.txt', self.compiler.fc),
('mpif77-vt-wrapper-data.txt', self.compiler.f77),
('mpif77-wrapper-data.txt', self.compiler.f77)
]
for wrapper_name, compiler in wrappers:
wrapper = join_path(wrapper_basepath, wrapper_name)
if not os.path.islink(wrapper):
# Substitute Spack compile wrappers for the real
# underlying compiler
match = 'compiler=.*'
substitute = 'compiler={compiler}'.format(compiler=compiler)
filter_file(match, substitute, wrapper, **kwargs)
# Remove this linking flag if present
# (it turns RPATH into RUNPATH)
filter_file('-Wl,--enable-new-dtags', '', wrapper, **kwargs)
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