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# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
from spack import *
class Pcma(MakefilePackage):
"""PCMA is a progressive multiple sequence alignment program that combines
two different alignment strategies."""
homepage = "http://prodata.swmed.edu/pcma/pcma.php"
url = "http://prodata.swmed.edu/download/pub/PCMA/pcma.tar.gz"
version('2.0', sha256='4b92d412126d393baa3ede501cafe9606ada9a66af6217d56befd6ec2e0c01ba')
def edit(self, spec, prefix):
makefile = FileFilter('makefile')
makefile.filter('gcc', spack_cc)
def install(self, spec, prefix):
mkdirp(prefix.bin)
install('pcma', prefix.bin)
# set return value and change return type of function [-Wreturn-type]
patch('fix_return_type_err.patch')
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